Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi09g2359 ATGGACGGAGCGCCTCCTTCGTCCGGCGGCGGAACCGGAGGTCCGGCACCTTTCCTTATAAAGACCTATGAAATGGTCGACGATTCTTCCACCGATGATATTGTCTCGTGGAGCGCCACCAATAACAGCTTCGTCGTCTGGAATCCCCCTGAGTTCGCTCGTCAGCTTCTTCCCACCTATTTCAAGCACAACAACTTCTCCAGCTTCATCCGTCAGCTCAATACCTATGGATTTCGAAAAATACATCCTGAGCGGTGGGAGTTCTTTAATGATGAATTTGTAAAAGATCAAAAGCATCTTCTCAAGAATATTCACCGCAGGAAACCTATCCACAGTCACAGCCATCCTCCAGGCTCTGTCATGGACCCAGAACGGGCTGCATTTGAGGAAGAAATAGAGAAACTTACCCGTGAGAAATCTGCTCTCGAATCCAACATCGTCAGATTTAAACAACACTCAGCTGTAAAGCTTCAGCTGGAAGATCTATTGCAGCGATTAGACAGTATGGAGAAGAGACAGAAGAAGTTGCTGAACTTCTTTGAAAAGTCTCTTCAAAATCCTTCTTTTGTTGAACATCTTTCACGAAAACTTGATTGCATGGATTTATCAGCGTATAACAAGAAAAGAAGATTACCTCAGGCTGATCACTTGCAGCCAGTTGGTGAAAGTAACTTAATTGAAAATCAAGGCAATTTTAGGACAGAATTTGGCGCTGTCTTCCATCAAGATTTCTCGAATAAACTCAGATTGGAGTTATCACCAGCCGTTTCTGATATGAATCTAGTATCACGTAGCACTCAAAGTTCCAATGAAGATGGGGAAAACGCACAGAAGAGGCTATCTGAAGGAACGCCCAAAGGAGTGCAGACAAGAACAACTCTTGCCTTTGCACCTGAAACGTTAGAGCTTGCAGATACCGGAGCATCTTTTTCTTTCAAGATGGATTCATGTCCATCACAAAGAGCAATAACTGCTGAGAGCACTAAACTGCACTCTTTGCATCTAAGTAATGAAGAAGGTGACAGTAATATATCCTGCCATCTAAATTTGACTCTGGCATCTTCTCCTTTGCAAGTTAACAGGAATCCATACTCAGCTAGATCACCCCAAATAGATTGTCAGGAAATAGGCAAGTTAGCAGAATCAAGGTTTCACGAAAATTATAAAGATTCGAATAGTGGAGTTCCTTCAACCAGAAATCCCGCTCATGACGTTGCCAATTTAACTTCCTCGCAGTCAAAGGAGACTCCAAGCAGCAACCATGCCCCACAGACTGCTCCTCCAGCCAGAGTAAATGATGTGTTCTGGGAACAGTTCCTTACTGAAAGACCAGGTTGTTCAGACAGTGAAGAGGCAATATCCAACTATAGAGCAAATCCGTATGAAGAGCAAGACGAGGGCAGGTCAATTCCTGGAATCTCCTCCAGGAATGTTAAGAATATGGATCGGCTCACGCTTTGA 1461 0.4387 MDGAPPSSGGGTGGPAPFLIKTYEMVDDSSTDDIVSWSATNNSFVVWNPPEFARQLLPTYFKHNNFSSFIRQLNTYGFRKIHPERWEFFNDEFVKDQKHLLKNIHRRKPIHSHSHPPGSVMDPERAAFEEEIEKLTREKSALESNIVRFKQHSAVKLQLEDLLQRLDSMEKRQKKLLNFFEKSLQNPSFVEHLSRKLDCMDLSAYNKKRRLPQADHLQPVGESNLIENQGNFRTEFGAVFHQDFSNKLRLELSPAVSDMNLVSRSTQSSNEDGENAQKRLSEGTPKGVQTRTTLAFAPETLELADTGASFSFKMDSCPSQRAITAESTKLHSLHLSNEEGDSNISCHLNLTLASSPLQVNRNPYSARSPQIDCQEIGKLAESRFHENYKDSNSGVPSTRNPAHDVANLTSSQSKETPSSNHAPQTAPPARVNDVFWEQFLTERPGCSDSEEAISNYRANPYEEQDEGRSIPGISSRNVKNMDRLTL 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi09g2359 486 MobiDBLite consensus disorder prediction 470 486 - -
Mibi09g2359 486 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 6 271 IPR027725 -
Mibi09g2359 486 SUPERFAMILY "Winged helix" DNA-binding domain 14 107 IPR036390 -
Mibi09g2359 486 Coils Coil 125 179 - -
Mibi09g2359 486 MobiDBLite consensus disorder prediction 389 426 - -
Mibi09g2359 486 PRINTS Heat shock factor (HSF) domain signature 18 41 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mibi09g2359 486 PRINTS Heat shock factor (HSF) domain signature 69 81 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mibi09g2359 486 PRINTS Heat shock factor (HSF) domain signature 56 68 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mibi09g2359 486 Pfam HSF-type DNA-binding 18 107 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mibi09g2359 486 SMART hsfneu3 14 107 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mibi09g2359 486 MobiDBLite consensus disorder prediction 262 288 - -
Mibi09g2359 486 MobiDBLite consensus disorder prediction 442 486 - -
Mibi09g2359 486 MobiDBLite consensus disorder prediction 387 429 - -
Mibi09g2359 486 ProSitePatterns HSF-type DNA-binding domain signature. 57 81 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mibi09g2359 486 Gene3D - 13 108 IPR036388 -
Mibi09g2359 486 FunFam Heat shock transcription factor 1 11 108 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi09g2359 Mibi-ChrMibi09 43074346 43078167 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi09g2359 18 486 HSF AT4G13980 54.316 3.71e-169 483
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Mibi09g2359 HSF_DNA-bind 2.8e-31 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi09g2359 09 43074346 43078167 Mibi09g2359 09 43074346 43078167 ECH