Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi09g2343 ATGGCTAACCCGAAGCTGAAAACCCTAGTTTCTCTCTCTATACTCATCCTCTCTCTCCTCTCCTCCTCCGCCATAGCCGACGATGCAGCCTTCATGTCTAAGCTCGCAAAAGCCCTCTCTAATCCCTCAGGCTGGTCCAGCAGCACTCCTTTCTGCAAATGGGAAGGCATCAAATGCGACAACTCCAACAGCGTCACCTCCATTAACCTCGCTTCAAAGTCTCTCTCTGGTACTCTCCCTTCTGATCTCAACTCTCTCTCCGCGTTAACTTCCCTCTCTCTTCAGAACAATGCTCTCTCTGGTCCTTTGCCCTCTCTCGCAAATCTCTCCTCTCTTCAAACTGTGTACCTTGACTCCAACAATTTCACCTCCATTCCTAACGGTTGCTTCCAAGGCCTCACCAGCTTGCAGACTCTAAGCTTGAGCGATAACGCCGACCTTGCTCCATGGACCTTTCCCACCGATTTGACTCAGTCTTCGAATCTGGGGACTCTTGACCTCGGTACGGCCAATCTTGTTGGCACTTTGCCTGATATTTTTGGTTCTTTACCGAGCTTACAGAGTTTACGCCTTTCTTATAATAACCTCACTGGTGGGTTGCCTGCGTCGTTTAATGGATCTGGAATTGCGAGGTTGTGGCTTAACAATCAAAACACTGGGTTATCTGGTTCAATTGACGTGTTATCGTCGATGATTCAGTTGTCTCAGGTTTGGCTTCAGAAGAATCAGTTCACGGGTCCCATTCCCGATTTGTCGAATTGCAAGAGTTTGTTTGATTTACAGCTGAGGGACAATCAGTTAACTGGTGTAGTCCCACCTTCTTTGATGACTCTTTCGAGCTTGAAGAATGTTTCTCTGGACAATGATAAGCTGCAGGGGCCGATGCCTGAGTTCGGCAAAGGTGTGCAGGTTACTCTTGATGGGAATAGCTTTTGTAAGAGTGGTCCGGGATCTTGTGATGATCGTGTCACGACGTTGCTTGAGATCGCTGCGGCTTTTGGGTATCCGGCTAAGTTGGCAGATTCGTGGGATGGCAATGAACCCTGCAATGATTGGAGCTTCATTGTGTGCACAGATGGGAAGATCACCACGGTGAATATGGCGAAGCAGAACTTTGGGGGAACAATCTCACCTGCATTTGCGAATTTGACGGATTTAAGGAACTTGTATCTGAGTGGCAATAATCTGACTGGCTCAATACCTGTGAGCCTGACAACTCTGCCTCAACTTGAGATTCTTGATGTGTCTGACAACAATCTATCTGGAGAGATTCCTAAATTCTCATCAAAGGTGAAGCTGACGCATACTGGTAATCTTTTGCTCGGAAAAACTACTGGTTCTGGGGGAGAAAATGGGGGTAGTCCTACCACAGGTTCTGGTGATGTTTCACCAGCTGGAAGTCCATCTGCAAAGGGAACTAGCACTTCATTGTCATCTGGTTGGATCGCAGGTATAGTCATTATTGTCCTGTTTTTTGTGGCGGTGGTGTTGTTCGTCTCTTGTAAATGTTATGCTAAAAAACGCCATCAGAAATTTGGAAGGGTTAGCAATCCTGAGAATGGAAAGGGAGATGTTAAAATTGATGTATCGGGTGTTTCCAATGGATATGCTGGGGTTGCTAGCGATTTGCATAGCCAGAGCAGTGGTGACCGTAGTGACCTTCATGTTTTCGAGGGTGGCAGTGCTACAATTTCAATTCAAGTTCTACGCCAAGTAACAAATAATTTCAGTGAAGAAAACATTTTAGGCAGGGGAGGATTTGGAGTTGTGTACAAAGGGGAATTGCACGATGGAACAAAAATTGCTGTGAAGAGGATGGAATCTGTTGCAATGGGAAGCAAAGGTTTGAATGAATTCCAAGCAGAGATCGCAGTCCTTAGTAAAGTCAGGCACAGGCATTTGGTTGCTCTTTTAGGCTATTGCATTAATGGCAATGAAAGGCTTTTAGTTTATGAGTACATGCCACAAGGCACACTAACACAACATCTTTTTGAATGGGGTGAGAGGGGGTGCGCACCTCTCACTTGGAAGCAAAGGGTAGCAATAGCATTGGATGTGGCAAGGGGAGTGGAGTATCTGCATAGCTTAGCTCAACAAAGTTTCATTCACAGAGACTTGAAGCCTTCAAACATACTTCTAGGTGATGACATGAGAGCGAAGGTTGCAGATTTTGGGTTGGTTAAAAATGCACCTGATGGAAAGTATTCTGTTGAGACACGGTTGGCTGGAACTTTTGGGTATCTTGCACCTGAATATGCAGCTACTGGAAGAGTGACAACCAAAGTGGATGTCTACGCATTTGGGGTTGTTTTGATGGAACTGATCACTGGCAGAAAGGCATTGGATGACACTGTCCCAGATGAAAGGTCTCACTTGGTGTCATGGTTCCGTAGGGTTCTAATTAACAAAGAGAACATCCCCAAGGCTATTGATCAAACTTTGGACCCTGACGAGGAGACGATGGAGAGCATATATAAGGTGGCCGAGCTTGCAGGGCACTGCACTGCTCGCGAGCCATACCAAAGGCCAGACATGGGCCATGCAGTGAATGTGTTGGGTCCTCTTGTAGAGCAGTGGAAACCAACTAACCACGAAGAAGAAGAAGGTTATGGGATTGACCTTCACATGAGCCTACCTCAAGCTCTTCAAAGATGGCAAGCCAACGAAGGCACTTCTGCAATGTTTAATGACATGTCCCTCTCACAAACCCAATCAAGCATCCCCTCCAAACCTACGGGATTCGCAGACTCCTTCGGTTCAATGGATTGCAGGTAA 2775 0.4645 MANPKLKTLVSLSILILSLLSSSAIADDAAFMSKLAKALSNPSGWSSSTPFCKWEGIKCDNSNSVTSINLASKSLSGTLPSDLNSLSALTSLSLQNNALSGPLPSLANLSSLQTVYLDSNNFTSIPNGCFQGLTSLQTLSLSDNADLAPWTFPTDLTQSSNLGTLDLGTANLVGTLPDIFGSLPSLQSLRLSYNNLTGGLPASFNGSGIARLWLNNQNTGLSGSIDVLSSMIQLSQVWLQKNQFTGPIPDLSNCKSLFDLQLRDNQLTGVVPPSLMTLSSLKNVSLDNDKLQGPMPEFGKGVQVTLDGNSFCKSGPGSCDDRVTTLLEIAAAFGYPAKLADSWDGNEPCNDWSFIVCTDGKITTVNMAKQNFGGTISPAFANLTDLRNLYLSGNNLTGSIPVSLTTLPQLEILDVSDNNLSGEIPKFSSKVKLTHTGNLLLGKTTGSGGENGGSPTTGSGDVSPAGSPSAKGTSTSLSSGWIAGIVIIVLFFVAVVLFVSCKCYAKKRHQKFGRVSNPENGKGDVKIDVSGVSNGYAGVASDLHSQSSGDRSDLHVFEGGSATISIQVLRQVTNNFSEENILGRGGFGVVYKGELHDGTKIAVKRMESVAMGSKGLNEFQAEIAVLSKVRHRHLVALLGYCINGNERLLVYEYMPQGTLTQHLFEWGERGCAPLTWKQRVAIALDVARGVEYLHSLAQQSFIHRDLKPSNILLGDDMRAKVADFGLVKNAPDGKYSVETRLAGTFGYLAPEYAATGRVTTKVDVYAFGVVLMELITGRKALDDTVPDERSHLVSWFRRVLINKENIPKAIDQTLDPDEETMESIYKVAELAGHCTAREPYQRPDMGHAVNVLGPLVEQWKPTNHEEEEGYGIDLHMSLPQALQRWQANEGTSAMFNDMSLSQTQSSIPSKPTGFADSFGSMDCR 924
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi09g2343 924 PANTHER OSJNBA0070M12.3 PROTEIN 12 924 - -
Mibi09g2343 924 MobiDBLite consensus disorder prediction 443 470 - -
Mibi09g2343 924 FunFam Receptor-like kinase TMK4 26 317 - -
Mibi09g2343 924 ProSitePatterns Protein kinases ATP-binding region signature. 582 604 IPR017441 GO:0005524
Mibi09g2343 924 SMART serkin_6 576 856 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi09g2343 924 ProSiteProfiles Leucine-rich repeat profile. 385 408 IPR001611 GO:0005515
Mibi09g2343 924 ProSiteProfiles Protein kinase domain profile. 576 856 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi09g2343 924 MobiDBLite consensus disorder prediction 902 924 - -
Mibi09g2343 924 ProSitePatterns Serine/Threonine protein kinases active-site signature. 701 713 IPR008271 GO:0004672|GO:0006468
Mibi09g2343 924 Gene3D Ribonuclease Inhibitor 320 445 IPR032675 -
Mibi09g2343 924 SUPERFAMILY L domain-like 59 435 - -
Mibi09g2343 924 SMART LRR_typ_2 383 406 IPR003591 -
Mibi09g2343 924 SMART LRR_typ_2 109 132 IPR003591 -
Mibi09g2343 924 SMART LRR_typ_2 407 431 IPR003591 -
Mibi09g2343 924 SMART LRR_typ_2 183 206 IPR003591 -
Mibi09g2343 924 SMART LRR_typ_2 133 154 IPR003591 -
Mibi09g2343 924 Gene3D Ribonuclease Inhibitor 26 319 IPR032675 -
Mibi09g2343 924 Pfam Leucine Rich Repeat 185 204 IPR001611 GO:0005515
Mibi09g2343 924 SUPERFAMILY Protein kinase-like (PK-like) 552 852 IPR011009 -
Mibi09g2343 924 FunFam receptor protein kinase TMK1 654 871 - -
Mibi09g2343 924 Pfam Leucine rich repeat 379 420 IPR001611 GO:0005515
Mibi09g2343 924 Pfam Leucine rich repeat 108 144 IPR001611 GO:0005515
Mibi09g2343 924 Gene3D Transferase(Phosphotransferase) domain 1 654 875 - -
Mibi09g2343 924 Gene3D Phosphorylase Kinase; domain 1 538 653 - -
Mibi09g2343 924 FunFam Leucine-rich repeat receptor-like kinase 321 444 - -
Mibi09g2343 924 CDD STKc_IRAK 582 855 - -
Mibi09g2343 924 FunFam receptor protein kinase TMK1 538 653 - -
Mibi09g2343 924 Pfam Leucine rich repeat N-terminal domain 32 60 IPR013210 -
Mibi09g2343 924 Pfam Leucine rich repeat N-terminal domain 321 357 IPR013210 -
Mibi09g2343 924 Pfam Protein tyrosine and serine/threonine kinase 579 850 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi09g2343 Mibi-ChrMibi09 42930999 42934480 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi09g2343 33 852 Receptor kinase-like Gene Family AT5G49660 29.915 4.56e-96 322
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IX Mibi09g2343 PK_Tyr_Ser-Thr 1e-47 CL0016