Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi09g2334 ATGTCATATCATGGTTTGGTTCACTTTACCAGCTGCCTCAATTTGATGCTAAAGTTACAGACAAAAATGGCGAATCCGGTGACTCCGATTCCCACTCACCATCTCCGTTTCAAGCACAGCACAATAACGAAACCTTGCAACCCCATCTTCCTTAAACCCTTCCCGAAATTCCCTTTTCTCCTCACTCGAATCCGTTTGTCCACTCTCCGTATCTCACCCACTGACACATTTTCACAAAGTTCTTCCCTTCAGCACAAAACCCTTCTTGTTGAGACTTACCATGAGCATCGCATCCTCAAATCCTTATTGCGGAAGCTTCAGGAGAAAGATTCAAGCCCTCTCCACATACTCCAAGAAGACGGGGATTGGTCCAAAGACCAGTTCTGGGTAGTCGTCAGGTTTCTCAAACATGCCTCCAGATCCAAAGAAATCCTTCAGGTATTTGATATGTGGAAGAAAATTGAGGAATCAAGGATTAATGAATTCAACTATAACAATATAATACGTGCGTTGATTGAAGAAGGAATGATGGAAGAGGCAGTGGCTGCACTGCAGGAGATGAAGAATTATGGTCTCAAAGCTGCTTTAGGTGCGTACAACCCAATAATTTATGGTTTCTCTATGGAAGGCAAATTTAGTGATGCTCTTTTTTTTCTAAGTGAGATGAAGGCATCCAGTGTATTGCCGGACAGTGAAACCTATGATGGTTTCATTAAAGGCTATGGGAAGTTTAAGATGTATGATGAGATGGGCTTGTGCGTGAAAATGATGGAGTTGGATGGATGTTCACTTGGTCACACGACTTATAACATACTTATAAGAGAATATTCAAAAGGTGGACTGCTTAAGAGAATGGAATCAACATATCAAAGAATGTTTTCCAAAAAAGTACGTGTGCAGTCTTCTACTTTTGTTGCAATGCTTGAGGCTTATGCCAGATTTGGGTTAATTACAAAGATGGAAAAAATTTATAGAAAACTTTTGAATTCAGAAACCCCTTTAAAGGATGATGTGATAAGAAAACTTGCAGAAGTTTATATTGAGCACTACATGTATTCTAGATTAGAAGATTTGGGGCTTGATTTACGTTCGACTTTTGGTGGGACCGAACTTGTTTGGTCCCTGCGCCTCCTTTCTTGTGCTTGTCTTTTGAGTCGAAAAGGCATGGATATCGTTGTTGGAGAAATGCGAGCAGCCAAAGTTCAGTGGAATGCTGCACTTGCTAATATTATCATGCTGGCTTATGTGAAGATGAACGATTTCAAGCACCTGAGAATTTTTCTTTCTCAATTGTCAGCCCATCGAGTGAAGCCTGACATAGTCACTATAGGAATCATTTTTGATGCAACTAGAATGGGTTTTGATGACAGAGGAACCTTGGAAAATTGGAGAAGGATGGGGTATCTCCGTAGAGTTGTAGAAATGGAAACAGATTCTCTGGTCCTTACTGCGTTTGGGAAAGGCCATTTTCTTAAGACCTGTGAAGAAGTGTACTCTTCTCTGCACCCAGAGGACAGAGACATTGAAACATGGACTTATGATGACCTAATTGATTTAGTATCTGAACATACTGAAGGTAATATCGGCCGTATGACATCCAAATAA 1605 0.4069 MSYHGLVHFTSCLNLMLKLQTKMANPVTPIPTHHLRFKHSTITKPCNPIFLKPFPKFPFLLTRIRLSTLRISPTDTFSQSSSLQHKTLLVETYHEHRILKSLLRKLQEKDSSPLHILQEDGDWSKDQFWVVVRFLKHASRSKEILQVFDMWKKIEESRINEFNYNNIIRALIEEGMMEEAVAALQEMKNYGLKAALGAYNPIIYGFSMEGKFSDALFFLSEMKASSVLPDSETYDGFIKGYGKFKMYDEMGLCVKMMELDGCSLGHTTYNILIREYSKGGLLKRMESTYQRMFSKKVRVQSSTFVAMLEAYARFGLITKMEKIYRKLLNSETPLKDDVIRKLAEVYIEHYMYSRLEDLGLDLRSTFGGTELVWSLRLLSCACLLSRKGMDIVVGEMRAAKVQWNAALANIIMLAYVKMNDFKHLRIFLSQLSAHRVKPDIVTIGIIFDATRMGFDDRGTLENWRRMGYLRRVVEMETDSLVLTAFGKGHFLKTCEEVYSSLHPEDRDIETWTYDDLIDLVSEHTEGNIGRMTSK 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi09g2334 534 Pfam PPR repeat family 198 242 IPR002885 -
Mibi09g2334 534 Pfam PPR repeat 164 192 IPR002885 -
Mibi09g2334 534 Pfam PPR repeat 268 296 IPR002885 -
Mibi09g2334 534 Pfam PPR repeat 303 328 IPR002885 -
Mibi09g2334 534 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 265 299 IPR002885 -
Mibi09g2334 534 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 195 229 IPR002885 -
Mibi09g2334 534 Gene3D Tetratricopeptide repeat domain 256 370 IPR011990 GO:0005515
Mibi09g2334 534 Gene3D Tetratricopeptide repeat domain 114 255 IPR011990 GO:0005515
Mibi09g2334 534 Gene3D Tetratricopeptide repeat domain 371 533 IPR011990 GO:0005515
Mibi09g2334 534 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 160 194 IPR002885 -
Mibi09g2334 534 PANTHER OS08G0520200 PROTEIN 66 525 - -
Mibi09g2334 534 TIGRFAM PPR: pentatricopeptide repeat domain 199 230 IPR002885 -
Mibi09g2334 534 TIGRFAM PPR: pentatricopeptide repeat domain 268 297 IPR002885 -
Mibi09g2334 534 TIGRFAM PPR: pentatricopeptide repeat domain 164 193 IPR002885 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi09g2334 150 466 Glycosyltransferase AT1G05670 21.739 1.26e-09 58.9