Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mibi09g2331 | ATGTCGGAATTGGCGAACACAGATCCCGAAGGTATTGACGGAATCCGCATGACATGGAACGCATGGCCTCGTACCAAGGTTGAAGCCAGCAAGTGCGTCATCCCACTTGCTGCTAACATCTCCTTGATCCGTTCTCATCCTGACATTCCTCGCCTACCTTATGCCCCTCTCCGATGCAAGACATGCTCTTCCGTTCTCAATCCCTTCTCTCGTGTTGATTTCACTGCTAAGATCTGGATCTGCCCATTTTGCTATCAACGCAACCATTTCAGTCTTAATTATCATGGAATCTCTGAGACCAATGTTCCTGGGGAGCTTTACCCACAGTACACCACTGTTGAATATGTGCTTCCTTTTCCCTCCAATAACAATTCGTTTGGGAATCCCAATAATCTCGATCCGGCCCATCAGTTGCAGCCTTCCCCTGTTTTTCTCTTTTTGCTTGATACTTGCATGATTGAGGAGGAGATGGAGTTTTTGAAATCTGCACTTAGACAAGCGATTGGTTTGTTACCAGACAATGCTCTTGTGGGTTTGATTTCTTTTGGTACCCAGGTTCAAGTTCATGAATTGGGGTTCGCGGATATGTCTAAGGTATATGTGTTTCGGGGTAGTAAGGAGATTTCGAAAGAACAGATTTTGGAGCAACTGGGTTTGGGTGCCTCTAGGAGGAGACAGGCTGGTGCATATCAAATGGGGTTGAAGGGTGGATTACCCCCTTCAGGGGTAACCCGGTTTTTACTGCCTGCATCTGATTGTGAATACACTCTTAATTCGCTATTGGATGAATTGCAAACCGATCAATGGCCTGTCCCACCAGGCAGCCGTCCAGCTCGGTGCACTGGAGTGGCTTTAAGTGTTGCAGCAGGATTACTTGGTGCTTGTGTTCCTGGTACTGGGGCTAGAATCATTGCTTTGGTCGGGGGTCCATGCACCGAAGGACCAGGCTCGATTGTGTCCAAAGATCTATCTGATCCAGTGCGTTCTCATAAAGATATTGATAAGGACGCAGCACCCTACTTCAAAAAAGCTGTCAAATCTTATGAGGGTCTTGCAAAACAGCTGGTTAGCCAGGGTCATGTTTTAGATCTTTTTGCATCAGCCCTTGATCAGGTTGGAGTTGCAGAAATGAAAGTTGTAGTGGAAAGAACTGGTGGCCTTGTTGTTCTATCTGAAAGTTTTGGTCATTCAGTTTTCAAGGACTCATTTAAACGTGTTTTTGAGGATGGGGAGCAGTCACTTGGTCTTTGCTTCAATGGAACCCTTGAGATCAACTGCTCCAAGGAAATAAAAGTTCAAGGAATTATTGGACCTTGCACATCACTGGAAAAGAAAGGGCCTTCAGTTGCTGATACTGTGATAGGAGAGGGGAACACAACGGCATGGAAGATGTGCGGTCTTGACAAGAGTACTTGCTTGACTGTGATGTTTGATCTTTCAACAAGTGACCGTTCAAGCAATCCAGGAACCATCAACCCTCAGTTTTACTTACAATTCCTTACAAGTTACCAAGGTCCTGATGGTCAATTAGCTCTTCGTGTAACAACAGTAACTAGAAGATGGGTAGATAGTGCTGTTAACTCTGAGGAATTGATACAAGGATTTGATCAAGAAACAGCTGCAGTTGTAATGGCTAGATATGCTTCTCTGAAAATGGAGATGGAGGAAGCATTTGATGCCACACGGTGGTTAGATCGACACCTCATTCGTTTCTGTTCAAAATTTGGGGACTACCGCAAGGATGACCCATCATCATTTACATTAAACCCATCATTTTCATTGTTCCCCCAGTTTATGTTCAATCTGCGACGGTCACAGTTTGTACAGGTTTTTAACAATAGTCCAGATGAGACTGCCTACTTCCGCATGCTGTTGAACAGGGAAAACATTAGTAATGCTGCCGTCATGATTCAGCCATCTTTAATATCATATTCATTCAATTCACTGCCTGCACCTGCATTGTTGGATGTATCTTCCATTGCTGCTGACAGGATTCTGTTGCTAGATTCATATTTTAGTGTCGTCGTTTTTCATGGGATGACAATAGCCCAGTGGCGCAACCTAGGATACCAGAACCAACCAGAACATCAGGCATTTGCACAACTATTGCAAGCTCCACGTGACGATGCTCAAATCATAATCAGAGATCGTTTTCCTGTTCCTAGATTGGTAGTTTGTGATCAACATGGTTCCCAGGCTAGATTTTTATTAGCAAAGCTGAACCCCTCGGCAACATACAACAATGCACACGAGATGGCCGCTGGTTCAGATGTGATCTTCACGGATGATGTGAGCCTTCAAGTCTTCTTTGAGCATCTTCAAAAGCTGGCTGTCGAATCTTGA | 2343 | 0.4469 | MSELANTDPEGIDGIRMTWNAWPRTKVEASKCVIPLAANISLIRSHPDIPRLPYAPLRCKTCSSVLNPFSRVDFTAKIWICPFCYQRNHFSLNYHGISETNVPGELYPQYTTVEYVLPFPSNNNSFGNPNNLDPAHQLQPSPVFLFLLDTCMIEEEMEFLKSALRQAIGLLPDNALVGLISFGTQVQVHELGFADMSKVYVFRGSKEISKEQILEQLGLGASRRRQAGAYQMGLKGGLPPSGVTRFLLPASDCEYTLNSLLDELQTDQWPVPPGSRPARCTGVALSVAAGLLGACVPGTGARIIALVGGPCTEGPGSIVSKDLSDPVRSHKDIDKDAAPYFKKAVKSYEGLAKQLVSQGHVLDLFASALDQVGVAEMKVVVERTGGLVVLSESFGHSVFKDSFKRVFEDGEQSLGLCFNGTLEINCSKEIKVQGIIGPCTSLEKKGPSVADTVIGEGNTTAWKMCGLDKSTCLTVMFDLSTSDRSSNPGTINPQFYLQFLTSYQGPDGQLALRVTTVTRRWVDSAVNSEELIQGFDQETAAVVMARYASLKMEMEEAFDATRWLDRHLIRFCSKFGDYRKDDPSSFTLNPSFSLFPQFMFNLRRSQFVQVFNNSPDETAYFRMLLNRENISNAAVMIQPSLISYSFNSLPAPALLDVSSIAADRILLLDSYFSVVVFHGMTIAQWRNLGYQNQPEHQAFAQLLQAPRDDAQIIIRDRFPVPRLVVCDQHGSQARFLLAKLNPSATYNNAHEMAAGSDVIFTDDVSLQVFFEHLQKLAVES | 780 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mibi09g2331 | 780 | Gene3D | Severin | 638 | 742 | IPR029006 | - | |
| Mibi09g2331 | 780 | CDD | Sec23_C | 628 | 748 | IPR037550 | GO:0030127|GO:0090114 | |
| Mibi09g2331 | 780 | SUPERFAMILY | Helical domain of Sec23/24 | 536 | 638 | IPR036175 | GO:0006886|GO:0006888|GO:0030127 | |
| Mibi09g2331 | 780 | Gene3D | - | 10 | 519 | - | - | |
| Mibi09g2331 | 780 | SUPERFAMILY | beta-sandwich domain of Sec23/24 | 8 | 535 | - | - | |
| Mibi09g2331 | 780 | Pfam | Sec23/Sec24 trunk domain | 141 | 407 | IPR006896 | GO:0006886|GO:0006888|GO:0030127 | |
| Mibi09g2331 | 780 | Gene3D | - | 53 | 112 | - | - | |
| Mibi09g2331 | 780 | FunFam | Protein transport protein SEC23 | 533 | 656 | - | - | |
| Mibi09g2331 | 780 | SUPERFAMILY | C-terminal, gelsolin-like domain of Sec23/24 | 639 | 778 | IPR036180 | - | |
| Mibi09g2331 | 780 | Pfam | Gelsolin repeat | 648 | 736 | IPR007123 | - | |
| Mibi09g2331 | 780 | Pfam | Sec23/Sec24 beta-sandwich domain | 418 | 522 | IPR012990 | - | |
| Mibi09g2331 | 780 | FunFam | Protein transport protein SEC23 | 53 | 112 | - | - | |
| Mibi09g2331 | 780 | Pfam | Sec23/Sec24 helical domain | 536 | 632 | IPR006900 | GO:0006886|GO:0006888|GO:0030127 | |
| Mibi09g2331 | 780 | Pfam | Sec23/Sec24 zinc finger | 56 | 94 | IPR006895 | GO:0006886|GO:0006888|GO:0008270|GO:0030127 | |
| Mibi09g2331 | 780 | Gene3D | von Willebrand factor, type A domain | 141 | 416 | IPR036465 | - | |
| Mibi09g2331 | 780 | FunFam | Protein transport protein SEC23 | 141 | 417 | - | - | |
| Mibi09g2331 | 780 | Gene3D | Sec23/Sec24 helical domain | 533 | 777 | - | - | |
| Mibi09g2331 | 780 | FunFam | Protein transport protein SEC23 | 638 | 742 | - | - | |
| Mibi09g2331 | 780 | SUPERFAMILY | Zn-finger domain of Sec23/24 | 47 | 118 | IPR036174 | GO:0006886|GO:0006888|GO:0008270|GO:0030127 | |
| Mibi09g2331 | 780 | SUPERFAMILY | vWA-like | 142 | 408 | IPR036465 | - | |
| Mibi09g2331 | 780 | PANTHER | PROTEIN TRANSPORT PROTEIN SEC23 | 7 | 778 | IPR037364 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Mibi09g2331 | Mibi-ChrMibi09 | 42803184 | 42809159 | Dispersed |