Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi09g2330 ATGGATGACGACTTTGATTTCTCCAATGCGGCTAACATGGGCATCGAAGACGAAGATATGGGGATTCCAGAGGATGACCCTGTTAGCCCAATTCTCAAGGTCGGAGAGGAGAAGGAGATCGGAAAGAATGGTCTGAAGAAGAAGCTGGTTAACGAGGGAGAAGGATGGGAGACTCCAAATGCTGGAGACGAGGTTGAAGTTCACTACACCGGGACATTGTTGGATGGTACAAAGTTTGATTCTAGCCGTGACAGGGGAACCCCATTTAAGTTCAAACTTGGTCAAGGGCATGTGATAAAGGGATGGGACGAAGGAATCAAAACCATGAAGAAAGGTGAAAATGCTGTTTTCACTATCCCTCCAGAATTGGCCTATGGAGAGTCTGGATCACCTCCTACTATTCCCCCTAATGCAACCCTGCAATTTGATGTGGAGTTGCTGTCTTGGACTAGTGTAAAGGACATAAGCAAGGATGGGGGTATCTTGAAAACAATTCTCTCTGAAGGAGAGAGCTGGGAAAATCCCAAGGATCTGGATGAAGTATTTGTTAAGTATGAAGCCAGACTCGATAATGGGACCGTTATTTCTAAATCTGATGGTGTGGAGTTTACCGTGGAAGATGGCTACTTCTGCCCTGCTTTGGCTAAGGCTGTGAAAACAATGAAGAAAGGAGAGAAAGTCCTTTTGAATGTGAAGCCACAATATGCATTTGGCGAGAATGGAAGACCAGCATCTGGTGATGAAGGTGCTGTACCTCCTGATTCGTCGCTCCAAATTAATCTTGAATTGATATCTTGGAAGGCTGTATCTGACATTACAAAGGATAAGAAAGTTCTCAAAAAAACTCTGAAAGAAGGGGAGAAATATGAACGACCAAATGATGGATCTGTTGTTCAAGTGAGACTTATTGGCAAGCTGCAAGATGGGACTGTTTTCACCAAGAAGGGTTATGATGAGGAGCAACCATTCGAGTTCAAAGTGGACGAAGAGCAAGTAATTGAGGGACTTGATCAAGCCGTGAAGAACATGAAGAAAGGGGAAATTGCACTGGTGACCATACAACCTGAATACGCCTTTGGCGCCTCTGGCTCTTCCCAAGAACTTGCTTCTGTTCCTCCTAATTCAACTGTGTGTTACGAAGTTGAGCTGATTTCATTTGAGAAGGAAAAGGAATCATGGGACATGAACACAGCAGAGAAGATTGAGGCAGCTGGAAAGAAAAAGGAAGAAGGGAACGCATACTTCAAGGCTGGTAAATATGTTAGAGCATCGAAGAGATATAAGAAGGCAATGAGTTATATTGAGTATGACTCCAGTTTTAATGATGAGGAGAAGAGGCAGACCAAGGCACTGAAAATATCAATCAACCTCAATAATGCTGCCTGCATGCTAAAGCTTAAAGACTACAAGGAAGCAGTAAAGTTGTGCACAAAGGTATTAGAGCTAGATAGTGGTAATGTGAAAGCTCTGTACCGGAGGGCACAGGCATATATACAACTTGTGGACTTGGACCTTGCTGAAATGGACATTAAGAAGGCCCTTGAAATTGAGCCAGACAATAGGGACTTAAAAGTGGAACACAAAATTTTGAAGGATAAAGTGAGAGAGTACAACAAGAAGGACGCAGAGTTCTATGGCAGCATATTTGCTAAAATGAACAAGTTTGAAAAAACTAGGAAGCCACAGCACGTGCCAATGGCTGTTGATAGCAAAGCATGA 1719 0.4328 MDDDFDFSNAANMGIEDEDMGIPEDDPVSPILKVGEEKEIGKNGLKKKLVNEGEGWETPNAGDEVEVHYTGTLLDGTKFDSSRDRGTPFKFKLGQGHVIKGWDEGIKTMKKGENAVFTIPPELAYGESGSPPTIPPNATLQFDVELLSWTSVKDISKDGGILKTILSEGESWENPKDLDEVFVKYEARLDNGTVISKSDGVEFTVEDGYFCPALAKAVKTMKKGEKVLLNVKPQYAFGENGRPASGDEGAVPPDSSLQINLELISWKAVSDITKDKKVLKKTLKEGEKYERPNDGSVVQVRLIGKLQDGTVFTKKGYDEEQPFEFKVDEEQVIEGLDQAVKNMKKGEIALVTIQPEYAFGASGSSQELASVPPNSTVCYEVELISFEKEKESWDMNTAEKIEAAGKKKEEGNAYFKAGKYVRASKRYKKAMSYIEYDSSFNDEEKRQTKALKISINLNNAACMLKLKDYKEAVKLCTKVLELDSGNVKALYRRAQAYIQLVDLDLAEMDIKKALEIEPDNRDLKVEHKILKDKVREYNKKDAEFYGSIFAKMNKFEKTRKPQHVPMAVDSKA 572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi09g2330 572 SMART tpr_5 453 486 IPR019734 GO:0005515
Mibi09g2330 572 SMART tpr_5 404 437 IPR019734 GO:0005515
Mibi09g2330 572 SMART tpr_5 487 520 IPR019734 GO:0005515
Mibi09g2330 572 Pfam Tetratricopeptide repeat 465 520 - -
Mibi09g2330 572 SUPERFAMILY FKBP-like 34 153 - -
Mibi09g2330 572 Gene3D - 154 267 IPR046357 GO:0003755
Mibi09g2330 572 Gene3D Tetratricopeptide repeat domain 390 547 IPR011990 GO:0005515
Mibi09g2330 572 SUPERFAMILY TPR-like 392 552 IPR011990 GO:0005515
Mibi09g2330 572 FunFam Peptidylprolyl isomerase 154 267 - -
Mibi09g2330 572 SUPERFAMILY FKBP-like 269 404 - -
Mibi09g2330 572 Coils Coil 520 540 - -
Mibi09g2330 572 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 156 270 - -
Mibi09g2330 572 FunFam Peptidylprolyl isomerase 35 153 - -
Mibi09g2330 572 FunFam Peptidylprolyl isomerase 268 389 - -
Mibi09g2330 572 MobiDBLite consensus disorder prediction 1 29 - -
Mibi09g2330 572 SUPERFAMILY FKBP-like 153 270 - -
Mibi09g2330 572 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 290 384 IPR001179 GO:0003755
Mibi09g2330 572 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 57 147 IPR001179 GO:0003755
Mibi09g2330 572 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 173 264 IPR001179 GO:0003755
Mibi09g2330 572 Gene3D - 38 153 IPR046357 GO:0003755
Mibi09g2330 572 Gene3D - 268 388 IPR046357 GO:0003755
Mibi09g2330 572 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 178 267 IPR001179 GO:0003755
Mibi09g2330 572 ProSiteProfiles TPR repeat profile. 487 520 IPR019734 GO:0005515
Mibi09g2330 572 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 62 150 IPR001179 GO:0003755
Mibi09g2330 572 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 295 387 IPR001179 GO:0003755
Mibi09g2330 572 FunFam Peptidylprolyl isomerase 392 547 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi09g2330 Mibi-ChrMibi09 42795360 42798232 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi09g2330 1 572 Calmodulin-binding Proteins AT5G48570 70.588 0.0 828