Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mibi09g2312 | ATGGCATTGTGCTTTCATTCTTCACTCATCAGTGACAGGCTAGTTTCTTCCCAGAATTCCAACTTTCTTTCTGGTGAAATTCCGATGTCCTTTCCCATTAGTAGGAACCAAAGAAATAATTACTGCCTAGGCAATGTTTCAGTTTCAGTTTCAGTTTCTTGTTCCTCTGTCAAACTTGTGCGGGATAGGTCACTTGACAGGCATGTTGTTAAAAAGAATAGAATTCGGTTTGTTCAAAAACTCATGACTTTACTTCTTTCTAAGCCCAAACACTATCTTCCACTTCAAATTCTCACAAAATGCCGGTCATATCTAAATCTTTATTCACCTCGTTCTCTACTTGCTATGATCCATCGCTATCCATCCATCTTTGAATTCTTCACCATCCCGTATCCTCCTACACCACTCAATGCCACAAGGCAATATCCTCAACTCTGTGTCCGTCTAACTCCAGCTGCCGTGTCTCTTGCTGCCGCGGAACTGAATCTCAAAGACTCTGTTTCCACCACCTTAGCTGTTAAACTCCAGAAACTTCTTATGCTATCTACTCATCATCGGCTACTTTTGTCAAAGTTGGTTCACATGGGTCCAGATCTCGGCCTTCCTCCTAATTTTCGATCCAGGCTGTGCAATGACCACCCAGATAGATTTAAAACTGTTGACACCTCCTATGGTCGTGCACTTGAGCTTGTATCCTGGGACCCCAGCTTGGCGCAGCCTTTGCCCTCTCCTACATTTCACTCTAGTGATTTTATAGTTGACAGACCTTTGAAGTTTAAGCAATTAAGACTTCGAAAGGGGCTTAATTTAAAGAGACGCCACCAGGATTTCTTGATAAAATTTGAAGAAATGCCTGAAGTGTGTCCTTATAAGATCCCTATTGAAAGTCTGGAAAAAGAATCGGTGGAGGCAGAGAAGAGATCTTGTGCTGTAGTAAGAGAGGTTCTAGGAATGACGGTTGAAAAGAGGACTTTGGTAGACCATTTAACCCATTTCAGGAAGGAGTTTGGGCTCCCAAACAAGTTGAGAGGGATGATCCTGAGGCACCCAGAGTTATTCTATGTTAGTTTAAAAGGACAAAGGGATTCTATATTCCTGGTCGAGAAGTTTGATGAGAAGGGTGACCTATTAGAGAAGGATAAACTTTTGATATTACAAGATCAGTGGATAGCTTTGGCCAGGGAATCCAAACGAATAAGATGGGAAAGAAGAAAGTCCAGGATTGACAAGGATGTCGGTCGTGTCAGTGCTAGTAATGATTCTGGCATGGATGATAATAATGATGACGAAGATGATTATGAGATTGATAACTTCAAAAATGGATATGATGATGGTTTTGAGGATTTATTCGAGGATTTGAATTTTGACGACGAGGACGATCAAATAAGCAAGTTTTTTGCCCAGAATAAGAATGGGGAGTTTTGGACTGCTGGATCTTCTAGTCAAAGTGGTTTGGAAGGAGCAGAAGTGCAACCTTGCTGCCATCATCTCTCTGGTCTAGCTAGGGTTTCTTTCTCAGTCTCACGGCACATTACGGCAAAATTCTCCACTGCTCTGAGAGTTCGTATCATACATAGAACATTCCAAACATGGCTACCAGTGCCTATGGCTAAGTCGTTCCTGCAAGTGGCGGCAACTGAGGAGGCTGCACCCCCTCTTCGAGTCATCCAGATGGAAGGATTGGCTATCTTGAAGATAATTAAACATTGCAAGGACCATTCACCTACCTTAGTCACCGGACAACTTCTTGGGCTTGATGTTGGCAGTGTTCTTGAAGTTACCAACTGTTTCCCCTTTCCGATAAGGGAAGAGGATGAGGAAATTGAGGCTGATGGTGCCAATTATCAGCTCGAAATGATGAGATGCTTGAGGGAGGTTAATGTTGACAATAATACTGTTGGATGGTATCAATCTACATTGCTAGGATCCTTTCAGACGGTGGAACTAATTGAAACTTTCATGAATTATCAGGAGAACATCAGACGTTGTGTTTGCATAATATATGATCCATCTAGGTCTGATCAAGGTGTCCTAGCTCTTAAGGCCTTGAAGCTCTCGGACTCATTCATGGAACTCTATCGCAGCAATAATATTACGGGGGAGAAACTGAGGGAGAAAAACTTGTCATGGGTAGATATCTTTGAGGAGATACCTATCAAAGTTTCAAATTCAGCCCTTATCAGTGCCTTTATGACTGAACTGGAACCTGATACACCAGTAACCCAGTGCGATTATGATCGTCTCCAATTGTCAACTAGTTCATTAATGGAGAGGAATATGGAATTTTTGATTGAATGCATGGACGATTTGTCAATGGAACAGCAGAAGTTTCAATTCTACTACCGGAGCTTGTCACGTCAGCAGGCCCAGCAGCAAGCTTGGCTTCAGAAGAGAAGGGTGGAAAACATGGCTCGCAAAGCTGCCGGAGAGGACCCATTGCCTGAGGAAGATGCAACAAATCCCATTTTCAAGCCAATCCCTGAGCCATCGCGATTGGACAGCTTCCTCATAACAAATCAAATTTCCAATTACTGCAACCAAATTAATGGGGTATCAGGGCAGAGCTTCAACAGACTATATTTGATGAAGGCTCTACATGAAGATTGA | 2607 | 0.4265 | MALCFHSSLISDRLVSSQNSNFLSGEIPMSFPISRNQRNNYCLGNVSVSVSVSCSSVKLVRDRSLDRHVVKKNRIRFVQKLMTLLLSKPKHYLPLQILTKCRSYLNLYSPRSLLAMIHRYPSIFEFFTIPYPPTPLNATRQYPQLCVRLTPAAVSLAAAELNLKDSVSTTLAVKLQKLLMLSTHHRLLLSKLVHMGPDLGLPPNFRSRLCNDHPDRFKTVDTSYGRALELVSWDPSLAQPLPSPTFHSSDFIVDRPLKFKQLRLRKGLNLKRRHQDFLIKFEEMPEVCPYKIPIESLEKESVEAEKRSCAVVREVLGMTVEKRTLVDHLTHFRKEFGLPNKLRGMILRHPELFYVSLKGQRDSIFLVEKFDEKGDLLEKDKLLILQDQWIALARESKRIRWERRKSRIDKDVGRVSASNDSGMDDNNDDEDDYEIDNFKNGYDDGFEDLFEDLNFDDEDDQISKFFAQNKNGEFWTAGSSSQSGLEGAEVQPCCHHLSGLARVSFSVSRHITAKFSTALRVRIIHRTFQTWLPVPMAKSFLQVAATEEAAPPLRVIQMEGLAILKIIKHCKDHSPTLVTGQLLGLDVGSVLEVTNCFPFPIREEDEEIEADGANYQLEMMRCLREVNVDNNTVGWYQSTLLGSFQTVELIETFMNYQENIRRCVCIIYDPSRSDQGVLALKALKLSDSFMELYRSNNITGEKLREKNLSWVDIFEEIPIKVSNSALISAFMTELEPDTPVTQCDYDRLQLSTSSLMERNMEFLIECMDDLSMEQQKFQFYYRSLSRQQAQQQAWLQKRRVENMARKAAGEDPLPEEDATNPIFKPIPEPSRLDSFLITNQISNYCNQINGVSGQSFNRLYLMKALHED | 868 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mibi09g2312 | 868 | Pfam | C-terminal region of eIF3h | 675 | 867 | IPR045810 | - | |
Mibi09g2312 | 868 | CDD | MPN_eIF3h | 554 | 817 | IPR027524 | GO:0003743|GO:0005737|GO:0005852 | |
Mibi09g2312 | 868 | PANTHER | PROTEIN WHAT'S THIS FACTOR 1 HOMOLOG, CHLOROPLASTIC | 51 | 427 | IPR045040 | GO:0003723 | |
Mibi09g2312 | 868 | SMART | pad1_6 | 555 | 688 | IPR000555 | GO:0005515|GO:0008233|GO:0008237 | |
Mibi09g2312 | 868 | Pfam | Plant organelle RNA recognition domain | 60 | 398 | IPR021099 | GO:0003723 | |
Mibi09g2312 | 868 | MobiDBLite | consensus disorder prediction | 412 | 431 | - | - | |
Mibi09g2312 | 868 | FunFam | Eukaryotic translation initiation factor 3 subunit H | 535 | 744 | - | - | |
Mibi09g2312 | 868 | Pfam | JAB1/Mov34/MPN/PAD-1 ubiquitin protease | 555 | 657 | IPR000555 | GO:0005515|GO:0008233|GO:0008237 | |
Mibi09g2312 | 868 | ProSiteProfiles | MPN domain profile. | 556 | 689 | IPR037518 | - | |
Mibi09g2312 | 868 | Gene3D | Cytidine Deaminase, domain 2 | 534 | 744 | - | - | |
Mibi09g2312 | 868 | Hamap | Eukaryotic translation initiation factor 3 subunit H [EIF3H]. | 551 | 868 | IPR027524 | GO:0003743|GO:0005737|GO:0005852 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Mibi09g2312 | Mibi-ChrMibi09 | 42600342 | 42607955 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Mibi09g2312 | 619 | 868 | Eukaryotic Initiation Factors Gene Family | AT1G10840 | 83.600 | 1.73e-148 | 435 |