Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi09g2312 ATGGCATTGTGCTTTCATTCTTCACTCATCAGTGACAGGCTAGTTTCTTCCCAGAATTCCAACTTTCTTTCTGGTGAAATTCCGATGTCCTTTCCCATTAGTAGGAACCAAAGAAATAATTACTGCCTAGGCAATGTTTCAGTTTCAGTTTCAGTTTCTTGTTCCTCTGTCAAACTTGTGCGGGATAGGTCACTTGACAGGCATGTTGTTAAAAAGAATAGAATTCGGTTTGTTCAAAAACTCATGACTTTACTTCTTTCTAAGCCCAAACACTATCTTCCACTTCAAATTCTCACAAAATGCCGGTCATATCTAAATCTTTATTCACCTCGTTCTCTACTTGCTATGATCCATCGCTATCCATCCATCTTTGAATTCTTCACCATCCCGTATCCTCCTACACCACTCAATGCCACAAGGCAATATCCTCAACTCTGTGTCCGTCTAACTCCAGCTGCCGTGTCTCTTGCTGCCGCGGAACTGAATCTCAAAGACTCTGTTTCCACCACCTTAGCTGTTAAACTCCAGAAACTTCTTATGCTATCTACTCATCATCGGCTACTTTTGTCAAAGTTGGTTCACATGGGTCCAGATCTCGGCCTTCCTCCTAATTTTCGATCCAGGCTGTGCAATGACCACCCAGATAGATTTAAAACTGTTGACACCTCCTATGGTCGTGCACTTGAGCTTGTATCCTGGGACCCCAGCTTGGCGCAGCCTTTGCCCTCTCCTACATTTCACTCTAGTGATTTTATAGTTGACAGACCTTTGAAGTTTAAGCAATTAAGACTTCGAAAGGGGCTTAATTTAAAGAGACGCCACCAGGATTTCTTGATAAAATTTGAAGAAATGCCTGAAGTGTGTCCTTATAAGATCCCTATTGAAAGTCTGGAAAAAGAATCGGTGGAGGCAGAGAAGAGATCTTGTGCTGTAGTAAGAGAGGTTCTAGGAATGACGGTTGAAAAGAGGACTTTGGTAGACCATTTAACCCATTTCAGGAAGGAGTTTGGGCTCCCAAACAAGTTGAGAGGGATGATCCTGAGGCACCCAGAGTTATTCTATGTTAGTTTAAAAGGACAAAGGGATTCTATATTCCTGGTCGAGAAGTTTGATGAGAAGGGTGACCTATTAGAGAAGGATAAACTTTTGATATTACAAGATCAGTGGATAGCTTTGGCCAGGGAATCCAAACGAATAAGATGGGAAAGAAGAAAGTCCAGGATTGACAAGGATGTCGGTCGTGTCAGTGCTAGTAATGATTCTGGCATGGATGATAATAATGATGACGAAGATGATTATGAGATTGATAACTTCAAAAATGGATATGATGATGGTTTTGAGGATTTATTCGAGGATTTGAATTTTGACGACGAGGACGATCAAATAAGCAAGTTTTTTGCCCAGAATAAGAATGGGGAGTTTTGGACTGCTGGATCTTCTAGTCAAAGTGGTTTGGAAGGAGCAGAAGTGCAACCTTGCTGCCATCATCTCTCTGGTCTAGCTAGGGTTTCTTTCTCAGTCTCACGGCACATTACGGCAAAATTCTCCACTGCTCTGAGAGTTCGTATCATACATAGAACATTCCAAACATGGCTACCAGTGCCTATGGCTAAGTCGTTCCTGCAAGTGGCGGCAACTGAGGAGGCTGCACCCCCTCTTCGAGTCATCCAGATGGAAGGATTGGCTATCTTGAAGATAATTAAACATTGCAAGGACCATTCACCTACCTTAGTCACCGGACAACTTCTTGGGCTTGATGTTGGCAGTGTTCTTGAAGTTACCAACTGTTTCCCCTTTCCGATAAGGGAAGAGGATGAGGAAATTGAGGCTGATGGTGCCAATTATCAGCTCGAAATGATGAGATGCTTGAGGGAGGTTAATGTTGACAATAATACTGTTGGATGGTATCAATCTACATTGCTAGGATCCTTTCAGACGGTGGAACTAATTGAAACTTTCATGAATTATCAGGAGAACATCAGACGTTGTGTTTGCATAATATATGATCCATCTAGGTCTGATCAAGGTGTCCTAGCTCTTAAGGCCTTGAAGCTCTCGGACTCATTCATGGAACTCTATCGCAGCAATAATATTACGGGGGAGAAACTGAGGGAGAAAAACTTGTCATGGGTAGATATCTTTGAGGAGATACCTATCAAAGTTTCAAATTCAGCCCTTATCAGTGCCTTTATGACTGAACTGGAACCTGATACACCAGTAACCCAGTGCGATTATGATCGTCTCCAATTGTCAACTAGTTCATTAATGGAGAGGAATATGGAATTTTTGATTGAATGCATGGACGATTTGTCAATGGAACAGCAGAAGTTTCAATTCTACTACCGGAGCTTGTCACGTCAGCAGGCCCAGCAGCAAGCTTGGCTTCAGAAGAGAAGGGTGGAAAACATGGCTCGCAAAGCTGCCGGAGAGGACCCATTGCCTGAGGAAGATGCAACAAATCCCATTTTCAAGCCAATCCCTGAGCCATCGCGATTGGACAGCTTCCTCATAACAAATCAAATTTCCAATTACTGCAACCAAATTAATGGGGTATCAGGGCAGAGCTTCAACAGACTATATTTGATGAAGGCTCTACATGAAGATTGA 2607 0.4265 MALCFHSSLISDRLVSSQNSNFLSGEIPMSFPISRNQRNNYCLGNVSVSVSVSCSSVKLVRDRSLDRHVVKKNRIRFVQKLMTLLLSKPKHYLPLQILTKCRSYLNLYSPRSLLAMIHRYPSIFEFFTIPYPPTPLNATRQYPQLCVRLTPAAVSLAAAELNLKDSVSTTLAVKLQKLLMLSTHHRLLLSKLVHMGPDLGLPPNFRSRLCNDHPDRFKTVDTSYGRALELVSWDPSLAQPLPSPTFHSSDFIVDRPLKFKQLRLRKGLNLKRRHQDFLIKFEEMPEVCPYKIPIESLEKESVEAEKRSCAVVREVLGMTVEKRTLVDHLTHFRKEFGLPNKLRGMILRHPELFYVSLKGQRDSIFLVEKFDEKGDLLEKDKLLILQDQWIALARESKRIRWERRKSRIDKDVGRVSASNDSGMDDNNDDEDDYEIDNFKNGYDDGFEDLFEDLNFDDEDDQISKFFAQNKNGEFWTAGSSSQSGLEGAEVQPCCHHLSGLARVSFSVSRHITAKFSTALRVRIIHRTFQTWLPVPMAKSFLQVAATEEAAPPLRVIQMEGLAILKIIKHCKDHSPTLVTGQLLGLDVGSVLEVTNCFPFPIREEDEEIEADGANYQLEMMRCLREVNVDNNTVGWYQSTLLGSFQTVELIETFMNYQENIRRCVCIIYDPSRSDQGVLALKALKLSDSFMELYRSNNITGEKLREKNLSWVDIFEEIPIKVSNSALISAFMTELEPDTPVTQCDYDRLQLSTSSLMERNMEFLIECMDDLSMEQQKFQFYYRSLSRQQAQQQAWLQKRRVENMARKAAGEDPLPEEDATNPIFKPIPEPSRLDSFLITNQISNYCNQINGVSGQSFNRLYLMKALHED 868
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi09g2312 868 Pfam C-terminal region of eIF3h 675 867 IPR045810 -
Mibi09g2312 868 CDD MPN_eIF3h 554 817 IPR027524 GO:0003743|GO:0005737|GO:0005852
Mibi09g2312 868 PANTHER PROTEIN WHAT'S THIS FACTOR 1 HOMOLOG, CHLOROPLASTIC 51 427 IPR045040 GO:0003723
Mibi09g2312 868 SMART pad1_6 555 688 IPR000555 GO:0005515|GO:0008233|GO:0008237
Mibi09g2312 868 Pfam Plant organelle RNA recognition domain 60 398 IPR021099 GO:0003723
Mibi09g2312 868 MobiDBLite consensus disorder prediction 412 431 - -
Mibi09g2312 868 FunFam Eukaryotic translation initiation factor 3 subunit H 535 744 - -
Mibi09g2312 868 Pfam JAB1/Mov34/MPN/PAD-1 ubiquitin protease 555 657 IPR000555 GO:0005515|GO:0008233|GO:0008237
Mibi09g2312 868 ProSiteProfiles MPN domain profile. 556 689 IPR037518 -
Mibi09g2312 868 Gene3D Cytidine Deaminase, domain 2 534 744 - -
Mibi09g2312 868 Hamap Eukaryotic translation initiation factor 3 subunit H [EIF3H]. 551 868 IPR027524 GO:0003743|GO:0005737|GO:0005852
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi09g2312 Mibi-ChrMibi09 42600342 42607955 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi09g2312 619 868 Eukaryotic Initiation Factors Gene Family AT1G10840 83.600 1.73e-148 435