Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi09g2270 ATGCAGCTCAAGCATCTCTGCGTCATTTTGCCTGCAGATTCTACTGAGTTTAAGCATGACCCACCATCAAAAGTCAACCAATCTCCCCAGAAAGAAACCAAGACAAAGAAAAGGAAACAAGACAGGGCTTGTGGGGGTCACGTTCTTGCCTTCTTACGTGATTCTCTGAGCAAATTATATGGCACAAAATGTTCGAGGAATTTCCCTAATGAAGTGGGGAAAGGGAAACAAGGCTCAGTTTTGATGTTTCATGACATGGATGGAGTACAACTCTCTGCAAAGATTGGTGGGGACAGCCCAAGAATCTTCAGCTTCGCTGAGCTTTTCATAGGTTCTAATGGTTTCAGTGAGAATCATGTTCTTGGAAGCGGAGGATTTGGCAAAGTGTACAAAGCTGTTTTGCCAAGTGATGGAACAGTGGTTGCTGTCAAATGTTGTTTAGAAGAGAAAGGGCAACAATTTGAGAAGACTTTTGCTGCAGAATTAGCAGCCGTGGCTCATCTTCGACACAAGAACCTTGTCAGGCTCAGAGGTTGGTGTGTCCATGAAGATCAGCTGTACCTTGTCTATGATTACATGCCTAACCTCAGCCTCGACCGCATACTCTTTCGCCGGCCCGAGAGTCCAAATTCTGAGCCCCTCGGTTGGGGAAGGCGTGGGAAGATTATCAAAGGCTTGGCAGCTGCATTATACTATCTTCATGAGCAGCTAGAGACTCAGATCATTCACAGGGATGTGAAAACCAGCAATGTGATGCTTGACTCCCAGTACAATGCTAGGTTGGGTGATTTTGGCTTGGCAAGGTGGCTAGAACATGAGCTTGAGTATAATAATCAAAGTAGGAAAACATCAACCAAAATTGACCCTTTCAGGTTGGCAGAGACAACAAGAATTGGTGGCACAATTGGGTATTTGCCACCTGAGAGTTTCCAGAAGAAAAGTATTGCTACTTCGAAATCTGATGTGTTCAGCTTCGGAATAGTTGTGCTGGAAGTGGCATCTGGAAGGAGAGCTATTGATCTTGCTTACCCTGATGATAAGATCATTTTGCTTGACTTTGTTAGGAGGCTATCTGATGAAGGAAAGCTCCTAGCAGCTGGGGATACTAAGCTACCAGATGGTTCCTACAAGCTTTCTGAGATGGAGCATTTACTTCACATAGGCCTTCTGTGTACACTCCATGAACCACAATCTAGGCCTAGCATGAGATGGATTGTAGAAGCACTTTCCGATGTTTCAAACCCATTGCCAGCTCTTCCTTCTTTCCATTCCCATCCTTTGTATATTACATTATCTTCTCCATCTGATACAAGTCTCAGCAGCACAAATGGCTCCAGCACTGTCACAGAAAATGTCAGCATAATCACCAACTTTTCTTCATCCAACTATGTTACAGCAAATGGGAGGACAATATACATGACTGCTGAAGACAGAAACAGCGGAATTTCCTCAGCGAAGAGCATGTATCGCAACGGGTCATTATATCCTGTGGTGGAAGCTCCAAGGGAGATATCATACAAGGAGCTTGCCTTGGCTACAGATCATTTTTCAGATTCAAGGAAGGTAGCAGAGCTAGACTTTGGAACTGCCTACCATGGCATCCTTGAGGAACATTGTCATGTCATGGTGAAACGCCTTGGAATGAAGACATGCCCTGCTCTGCGTGAAAGATTCTCGAATGAACTGCGGAATATAGCAAGGCTTCGCCACCGGAATCTGGTGCAGCTTCGAGGATGGTGTACGGAGCATGGGGAAATGCTTGTTGTGTATGACTACTCGGCAACAAGACTTCTCAGTCACCATCTTCTCCGTCATAATAATCCTAGAGATGGGTGTTCTGTCCTGAAATGGCATCACAGATACAATATAATAAAATCTCTGGCTTCTGCCATTCTTTATCTTCATGAGGAATGGGAAGAACATGTAATTCATAGGAACATCACTTCTTCAGCTGTTGTCCTTGAGCCAGATATGAACCCAAGGCTCACCAGTTTTGCCCTGGCTGAATTCTTGACCCGGAATGAGCATGGACATCATGTAATCAAAGACACCAGTCAATCGGTTCGAGGGATTTTCGGCTACATGTCACCAGAATATATAGAATCTGGTGAAGCTACCTCTGCAGCTGATGTTTACAGTTTTGGCGTGGTGGTACTTGAAGTTATCAGTGGACAGATGGCCGTGGATTTTCGGCAGCCTGAGGTGCTGTTGGTGAAGAAGGTTCATGAATTTGAGACAAGAAAGAGACCACTGGAGGGTTTAGCAGACTTGAGGCTCAATGGAGAGTACAATTACAAAGAACTGATGAGATTGGTTAAGCTAGGAATTGCATGTACCCGGTCTGACCCACAGTTAAGACCAAACATGAGACAAATAGTGAGCATCCTTGATGGAAATGACAGATTGATCATGGAAAAAAATCAGAAAGAGAGCACAGAACAATGGAAAGAAAGGAATGCTTATTCATTGTCACTGATCAGGAGAATCCAAGCTCTAGGAATCCGTTGA 2508 0.4446 MQLKHLCVILPADSTEFKHDPPSKVNQSPQKETKTKKRKQDRACGGHVLAFLRDSLSKLYGTKCSRNFPNEVGKGKQGSVLMFHDMDGVQLSAKIGGDSPRIFSFAELFIGSNGFSENHVLGSGGFGKVYKAVLPSDGTVVAVKCCLEEKGQQFEKTFAAELAAVAHLRHKNLVRLRGWCVHEDQLYLVYDYMPNLSLDRILFRRPESPNSEPLGWGRRGKIIKGLAAALYYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELEYNNQSRKTSTKIDPFRLAETTRIGGTIGYLPPESFQKKSIATSKSDVFSFGIVVLEVASGRRAIDLAYPDDKIILLDFVRRLSDEGKLLAAGDTKLPDGSYKLSEMEHLLHIGLLCTLHEPQSRPSMRWIVEALSDVSNPLPALPSFHSHPLYITLSSPSDTSLSSTNGSSTVTENVSIITNFSSSNYVTANGRTIYMTAEDRNSGISSAKSMYRNGSLYPVVEAPREISYKELALATDHFSDSRKVAELDFGTAYHGILEEHCHVMVKRLGMKTCPALRERFSNELRNIARLRHRNLVQLRGWCTEHGEMLVVYDYSATRLLSHHLLRHNNPRDGCSVLKWHHRYNIIKSLASAILYLHEEWEEHVIHRNITSSAVVLEPDMNPRLTSFALAEFLTRNEHGHHVIKDTSQSVRGIFGYMSPEYIESGEATSAADVYSFGVVVLEVISGQMAVDFRQPEVLLVKKVHEFETRKRPLEGLADLRLNGEYNYKELMRLVKLGIACTRSDPQLRPNMRQIVSILDGNDRLIMEKNQKESTEQWKERNAYSLSLIRRIQALGIR 835
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi09g2270 835 Pfam Protein kinase domain 116 404 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi09g2270 835 Gene3D Phosphorylase Kinase; domain 1 86 192 - -
Mibi09g2270 835 PANTHER - 90 411 - -
Mibi09g2270 835 MobiDBLite consensus disorder prediction 17 41 - -
Mibi09g2270 835 Gene3D Transferase(Phosphotransferase) domain 1 597 823 - -
Mibi09g2270 835 Gene3D Transferase(Phosphotransferase) domain 1 193 414 - -
Mibi09g2270 835 ProSiteProfiles Protein kinase domain profile. 516 802 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi09g2270 835 SMART serkin_6 115 405 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi09g2270 835 SMART serkin_6 516 803 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi09g2270 835 ProSiteProfiles Protein kinase domain profile. 115 428 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi09g2270 835 FunFam Receptor like protein kinase S.2 594 820 - -
Mibi09g2270 835 Gene3D Phosphorylase Kinase; domain 1 479 592 - -
Mibi09g2270 835 CDD STKc_IRAK 527 798 - -
Mibi09g2270 835 ProSitePatterns Protein kinases ATP-binding region signature. 121 144 IPR017441 GO:0005524
Mibi09g2270 835 ProSitePatterns Serine/Threonine protein kinases active-site signature. 241 253 IPR008271 GO:0004672|GO:0006468
Mibi09g2270 835 FunFam Receptor like protein kinase S.2 89 192 - -
Mibi09g2270 835 SUPERFAMILY Protein kinase-like (PK-like) 99 439 IPR011009 -
Mibi09g2270 835 FunFam Receptor like protein kinase S.2 193 415 - -
Mibi09g2270 835 SUPERFAMILY Protein kinase-like (PK-like) 494 797 IPR011009 -
Mibi09g2270 835 Pfam Protein tyrosine and serine/threonine kinase 520 796 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi09g2270 Mibi-ChrMibi09 42060282 42062789 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi09g2270 506 799 Receptor kinase-like Gene Family AT3G53810 38.796 1.61e-53 196
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Mibi09g2270 Pkinase 1.3e-42 CL0016