Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi09g2266 ATGGATTACAAGTTTCCCAAGATGGAAATCTCCAAGGAAAAAGAATTTTCAACTTGCTTTAAAGAAACGGCAATGGCATCAAAGATTTGGGGGGATCCAATCATTAAAGGGTCTCAGACTCTCACTGCTTCTCATCACATTCATGTGGCAAGGGGGATGGATTCAATATCATCAATAGCATCACCAGAAAAGCTTCTTTCAATTTCAGATTCGACGTCAACAATAGAAGAGCTAGCAGGAGCCACTTTCACTAGTTTTCTCCCTCAAAGGTTCACTGATCAAGAGGAAATCACCCAAGTGCAACAGAGAAATCAATTCCTTTCTGAATTTAATCCTATCTGTACTACTCCAAATGCTTCTACCTCAGGAGCCGGAGAAAGTTTCATCCCCCTAAATCTATTGGAAACACTTCCAGCATTACCAAGAGCAGACGCATCTGATGAGTCAGCTTCTCCAGCTTCTTCAACTGCTACATCTAGATTTCCATATTTGACATTGTTTCTGCAGGAGCCCTCCAGGTTATTTTCATCATCCTCAAAAGCCACTGAGTCGCCAGGCAAGCCCAAAAATTGTGAACCTCAGCCAACTATTTCAGACACTTCATTTTCTGTGTCCCAGTGTCATGCAATTCAGAGCCAGACAATTACAGATCCACACAAAATGAATCAGAATCTTAAAAACTTCCGATCCAAGTCTTTTAATGACTACTGCTTGAGTCCCACCAAGACTCAGCCTATGAAGTATGCTGGACAAGGCAAGCTGTTTAAGGGGGTGAGGCAAAGGCACTGGGGAAAATGGGTTGCAGAGATTAGACTACCAAGGAATAGAACAAGGGTTTGGCTAGGGACATTTGACACAGCTGAAGATGCAGCCATGGCCTATGACACAGCTGCATACATACTTCGTGGAGAATATGCTCAACTGAACTTTCCAGATCTAAAGCATCATATCAAGGCCAATTCTTTGAATGGAACAACAGCTGCCTTATTGGAGGCAAAGCTTCAAGCAATATCACAAGGAATTTCTTCTCAAAGAGTGCCCACTGATTCCCTGCCAGGAATATTGAATAAGAAACCAGGTGAGAACGCCAAAATCAATGGAAAAAATCAGAGTCCAGCTAAAAAAGAATGGCAGTTTGACATAAAGAACAAGGTTGGAGTTGATACAATTGAGAGAAGCAAAAGCAAACATCAAGAGATATCAGACATGGAAGCTGTTCAGTTAAGTAGAATGCCCTCCTTGGACATGGACATAATTTGGGATTCCCTTTTAGTCTCCGATTTATGA 1287 0.4188 MDYKFPKMEISKEKEFSTCFKETAMASKIWGDPIIKGSQTLTASHHIHVARGMDSISSIASPEKLLSISDSTSTIEELAGATFTSFLPQRFTDQEEITQVQQRNQFLSEFNPICTTPNASTSGAGESFIPLNLLETLPALPRADASDESASPASSTATSRFPYLTLFLQEPSRLFSSSSKATESPGKPKNCEPQPTISDTSFSVSQCHAIQSQTITDPHKMNQNLKNFRSKSFNDYCLSPTKTQPMKYAGQGKLFKGVRQRHWGKWVAEIRLPRNRTRVWLGTFDTAEDAAMAYDTAAYILRGEYAQLNFPDLKHHIKANSLNGTTAALLEAKLQAISQGISSQRVPTDSLPGILNKKPGENAKINGKNQSPAKKEWQFDIKNKVGVDTIERSKSKHQEISDMEAVQLSRMPSLDMDIIWDSLLVSDL 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi09g2266 428 SUPERFAMILY DNA-binding domain 254 312 IPR016177 GO:0003677
Mibi09g2266 428 FunFam Ethylene-responsive transcription factor 2 253 312 - -
Mibi09g2266 428 ProSiteProfiles AP2/ERF domain profile. 254 311 IPR001471 GO:0003700|GO:0006355
Mibi09g2266 428 PRINTS Ethylene responsive element binding protein signature 255 266 IPR001471 GO:0003700|GO:0006355
Mibi09g2266 428 PRINTS Ethylene responsive element binding protein signature 277 293 IPR001471 GO:0003700|GO:0006355
Mibi09g2266 428 MobiDBLite consensus disorder prediction 177 198 - -
Mibi09g2266 428 SMART rav1_2 254 317 IPR001471 GO:0003700|GO:0006355
Mibi09g2266 428 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF061 115 423 - -
Mibi09g2266 428 Pfam AP2 domain 255 303 IPR001471 GO:0003700|GO:0006355
Mibi09g2266 428 Gene3D AP2/ERF domain 254 312 IPR036955 GO:0003700|GO:0006355
Mibi09g2266 428 CDD AP2 253 313 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi09g2266 Mibi-ChrMibi09 41996322 41997608 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi09g2266 129 423 AP2-EREBP Transcription Factor Family AT4G13620 43.894 4.17e-67 217
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mibi09g2266 AP2 4.3e-13 CL0081