Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi09g2235 ATGCGTCGGTGGCTTTGTTGTTCTTGTCATGTTGAGGAGCCTAACCCTTATGAAAATGAACACCTTAAAAGCCCAAGGAATTATGGAGATGGCAATCCAAAAGGCTCAAAGGCTTCAGCCCCTGTTAAACCTGAAACGCAAAAGGCTCCACCACCACCTATTGAAGTGCCAGAATTAGCTTTAGATGAACTAAAAGAAATGACTGACAACTTTGGATCAAAGGCATTGATCGGTGAAGGATCTTATGGGAGAGTATATTATGCAATTTTAAGCAATGGAAAGGCCGTGGCTGTGAAGAAGCTTGATGTTTCATCGGAACCTGAATCCAATGTTGAGTTTTTGACCCAGGTTTCGATGGTCTCAAGAATGAAGCATGAAAATTTTGTTGAGCTGCATGGTTATTGTGTTGAAGGAAATCTTCGTATACTTGCATATGAGTTTGCAACTATGGGCTCTCTTCATGACATATTGCATGGTAGGAAGGGAGTTCAAGGGGCACAACCAGGGCCAACCCTTGACTGGATGCAACGAGTTCGGATTGCAGTTGATGCAGCAAGAGGGTTGGAATACCTACATGAGAAAGTTCAGCCATCTATCATACACAGAGATATCCGATCAAGCAATGTGCTAATTTTTGATGATTACAAAGCAAAGATAGCTGATTTTAATCTTTCAAATCAGGCCCCTGACATGGCTGCGCGCCTTCATTCCACTCGCGTGTTGGGAACTTTTGGTTATCATGCTCCAGAGTATGCAATGACTGGTCAGTTGACTCAAAAAAGTGATGTCTACAGTTTTGGTGTTGTTCTTCTTGAACTTCTTACAGGGAGAAAACCTGTTGACCATACCATGCCTCGAGGACAGCAAAGTCTGGTCACATGGGCTACTCCAAGATTGAGTGAAGATAAAGTCAAACAATGCGTGGATCCAAAACTGAAGGGAGAATATCCTCCCAAAGCGATTGCAAAGTTGGCAGCTGTTGCAGCACTTTGTGTGCAGTATGAAGCCGAGTTTAGGCCGAATATGAGCATTGTGGTCAAGGCGCTGCAACCACTTCTGAAGGCTCCTCCTGCTCCTGCTCCTGCTCCTGCTCCAGCACCGGAAACTTGA 1110 0.445 MRRWLCCSCHVEEPNPYENEHLKSPRNYGDGNPKGSKASAPVKPETQKAPPPPIEVPELALDELKEMTDNFGSKALIGEGSYGRVYYAILSNGKAVAVKKLDVSSEPESNVEFLTQVSMVSRMKHENFVELHGYCVEGNLRILAYEFATMGSLHDILHGRKGVQGAQPGPTLDWMQRVRIAVDAARGLEYLHEKVQPSIIHRDIRSSNVLIFDDYKAKIADFNLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKPVDHTMPRGQQSLVTWATPRLSEDKVKQCVDPKLKGEYPPKAIAKLAAVAALCVQYEAEFRPNMSIVVKALQPLLKAPPAPAPAPAPAPET 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi09g2235 369 ProSitePatterns Tyrosine protein kinases specific active-site signature. 199 211 IPR008266 GO:0004672|GO:0006468
Mibi09g2235 369 SUPERFAMILY Protein kinase-like (PK-like) 49 349 IPR011009 -
Mibi09g2235 369 FunFam PTI1-like tyrosine-protein kinase 3 149 358 - -
Mibi09g2235 369 PANTHER PTO-INTERACTING PROTEIN 1-LIKE 4 357 - -
Mibi09g2235 369 ProSiteProfiles Protein kinase domain profile. 71 353 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi09g2235 369 Pfam Protein tyrosine and serine/threonine kinase 76 349 IPR001245 GO:0004672|GO:0006468
Mibi09g2235 369 Gene3D Phosphorylase Kinase; domain 1 39 147 - -
Mibi09g2235 369 MobiDBLite consensus disorder prediction 16 55 - -
Mibi09g2235 369 Gene3D Transferase(Phosphotransferase) domain 1 149 357 - -
Mibi09g2235 369 PIRSF ILK 31 356 - -
Mibi09g2235 369 SMART tyrkin_6 71 349 IPR020635 GO:0004713|GO:0006468
Mibi09g2235 369 FunFam PTI1-like tyrosine-protein kinase 3 33 147 - -
Mibi09g2235 369 ProSitePatterns Protein kinases ATP-binding region signature. 77 100 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi09g2235 Mibi-ChrMibi09 41685605 41688209 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi09g2235 5 350 Receptor kinase-like Gene Family AT4G02010 46.132 1.14e-95 298
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIII Mibi09g2235 PK_Tyr_Ser-Thr 1.7e-47 CL0016