Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi09g2232 ATGGCGACTGATTTCCGCAGCCATGTCCTGTCTTCGCCCAAACCCACTTCCATTTCTTCCTTCAACTCCAACAACAATCACTCTTCCCACACTCTCCTTCACTTCCCTCGAATCTCAAACCCCACATTCCCTTCTCATTCCTCTCTCTCATCATCACCCTCCATTATAACCAATCCGAAGCTATCTTCCCCTAAATCCACCGTCATATCATGTTCCCAATCTCAGAACAACACTCCCTCTCACCGTCGCCCTCAGTACATCCCCAGTCACATCCCCGATCCTAATTATGTACGGATCTTCGATACCACTCTTCGAAACGGTGAACGATCCCCCGGAGCTTCCATGACCTCTAAGGAGAAAACCGACATAGCGCGTCAGCTCGCTAAGCTTGGTGTGGATGTTATTGAGGCGGGTTTTCCTGCTGCTTCAAAAGATGATTTTGAGGCTGTTAAAATGATTGCTAAAGAGGTTGGGAATGCTGCTGATGATGAAGGGTATGTGCCTGTGATTTGTGGGTTGTCTAGGTGTAATGAAATAATGGCTCCACAGGATATCGGGCTTGAAAGATCCAATGAAGCTGGTATTGTTTTGGGGAAGCTTAGTGGATGCCATGCTTTGAAAAAAAAACTTGAGGAGCTTGGTTATGAACTCAATGACGACCAACATGAAAATATCTTTTGGCGTTTCAAAGCAGCGGCTGAACAAAAAAAGTTTCGTGCGTTCATCTCTTGTTTCTCTCCGGCGATGTACCGCTCACACGCGCCACTCAGAGTGTCTCAGAGGATGTCGATCGGTAGAACCCTGGAATTTCGTCGTCATCGGAGCAGTGCGTCACTCACACGTGCCTTCGCGATTTCAAATATGGGTTCCTCTACATCAGAACACTCAAACACAATAGGAGATCCTGAGGATGATTCTGATGTTCTTATTGAGTGTAAAGAGGTCTACAAATCTTTTGGGGAAAAGGAAATCCTAAATGGTGTGAGCTTTAAGATCAGGCATGGTGAAGCTGTTGGAATAATTGGTCCCTCTGGGACTGGCAAATCTACTGTTTTGAAGATTATTGCAGGATTGCTTTCTCCAGACAAGGGAGAGGTTTACATTCGAGGTCAAAAGAGGGCTGGTTTGATAAGCGATGAAGAAATATCTGGCCTTCGAATTGGATTAGTGTTTCAAAGTGCAGCTCTTTTTGATTCTTTGACTGTACGTGAAAATGTTGGTTTTCTCTTGTATGAACACTCGAGAATGTCTGAGGATCAAATTTCGGAGCTTGTCAAGGAAAGCTTGGCAGCTGTTGGATTAAAGGATGTTGAGGATCGGCTGCCTTCAGAGTTGTCTGGTGGGATGAAAAAGCGAGTTGCTTTAGCACGGTCCATTATTTATGACACTACAAATGATTCGATAGAACCGGAGGTGCTTTTGTATGATGAACCAACTGCTGGACTGGATCCCATAGCTTCTACTGTAGTTGAAGATCTGATCCGCTCTGTTCACATAAAAGGACGTGATGCTCTTGGAAAACCTGGGAAGATTGCATCTTATGTAGTTGTCACCCACCAACATAGTACCATTAAAAGAGCTATTGACAGGTTATTATTTTTACACAAGGGTAAGATTGTCTGGGAAGGAATGACTCATGAATTTACCACATCAACAAATCCAATTGTCCAACAGTTTGCATCCGGCAGCCTGGATGGTCCTATCAAATATTAG 1713 0.4442 MATDFRSHVLSSPKPTSISSFNSNNNHSSHTLLHFPRISNPTFPSHSSLSSSPSIITNPKLSSPKSTVISCSQSQNNTPSHRRPQYIPSHIPDPNYVRIFDTTLRNGERSPGASMTSKEKTDIARQLAKLGVDVIEAGFPAASKDDFEAVKMIAKEVGNAADDEGYVPVICGLSRCNEIMAPQDIGLERSNEAGIVLGKLSGCHALKKKLEELGYELNDDQHENIFWRFKAAAEQKKFRAFISCFSPAMYRSHAPLRVSQRMSIGRTLEFRRHRSSASLTRAFAISNMGSSTSEHSNTIGDPEDDSDVLIECKEVYKSFGEKEILNGVSFKIRHGEAVGIIGPSGTGKSTVLKIIAGLLSPDKGEVYIRGQKRAGLISDEEISGLRIGLVFQSAALFDSLTVRENVGFLLYEHSRMSEDQISELVKESLAAVGLKDVEDRLPSELSGGMKKRVALARSIIYDTTNDSIEPEVLLYDEPTAGLDPIASTVVEDLIRSVHIKGRDALGKPGKIASYVVVTHQHSTIKRAIDRLLFLHKGKIVWEGMTHEFTTSTNPIVQQFASGSLDGPIKY 570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi09g2232 570 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 310 561 IPR003439 GO:0005524
Mibi09g2232 570 PANTHER PROTEIN TRIGALACTOSYLDIACYLGLYCEROL 3, CHLOROPLASTIC 267 570 - -
Mibi09g2232 570 MobiDBLite consensus disorder prediction 1 23 - -
Mibi09g2232 570 SUPERFAMILY Aldolase 93 157 - -
Mibi09g2232 570 Pfam HMGL-like 97 178 IPR000891 GO:0003824
Mibi09g2232 570 Gene3D - 177 260 - -
Mibi09g2232 570 ProSitePatterns ABC transporters family signature. 445 459 IPR017871 GO:0005524|GO:0016887
Mibi09g2232 570 Pfam ABC transporter 325 480 IPR003439 GO:0005524
Mibi09g2232 570 CDD ABC_Org_Solvent_Resistant 310 559 - -
Mibi09g2232 570 Gene3D Aldolase class I 95 176 IPR013785 -
Mibi09g2232 570 Gene3D - 298 562 IPR027417 -
Mibi09g2232 570 MobiDBLite consensus disorder prediction 43 89 - -
Mibi09g2232 570 SMART AAA_5 334 538 IPR003593 -
Mibi09g2232 570 MobiDBLite consensus disorder prediction 43 84 - -
Mibi09g2232 570 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 308 551 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi09g2232 Mibi-ChrMibi09 41655225 41661540 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi09g2232 310 554 Calmodulin-binding Proteins AT2G36910 28.185 2.86e-14 74.3