Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi09g2222 ATGTTGTTTTTCTCCAACAACACTAATAATAATATTGATCTTCTTGAATCACTACCACCACAGGCTCCTCCTCCTTTCCCTCAAAACTTCAACACCGTGCCTGTGGACTATTCTCATCACAATCTCATGAAGTTTCGGATAGGAGAAGCCTCAGGCGAGAGCAGCAATAGTGGCATGCAGGATTATACACAAGCTGCTGCAGGTGTTGGCTATTATGGTGCACCCGCACCTTCTTCTTCTTCCTTCGATAAGCTCAATTTCACAGATGTCATGCACTTCTCAGATTTCGGACCCAAGCTGGCCTTAAACAATAATAATTGTACTACTAATGAAGAAGGAGTTGAAGAAGAAGGAGAAGATCATTCTGCAGGTGGAATGATGGACCCAGTTTTGTTCCTCAAGTTCCCTGTCTTAAACGACAAGTCTTTAGTGGAGGATCATAATCTCATGCCTGCAGGTGCACCAGAAGATCAAGGAGTCTCTGATCATAGTCATAATAATAATAATAATAGTAATAGGTTAGTTCATCAACATCATCATCATCATCAGCAACAAGGGTTGTTTCTTGGGGAAGAAGAAGAGATGGAGAAGAATAATAGTAACCCTACTAGCACTGTTCAAGAGAACAACAACAATACTAATACTAATAATAATAGTAAGAGCAAGAGGAAGAGACCTAGAACTATCAAAACTAGTGAGGAAGTTGAGAGTCAACGCATGACTCACATCGCCGTGGAGAGAAACCGCCGGAAGCAGATGAACGAGCACCTTCGTGTCCTAAGATCCCTCATGCCCGGTTCTTACGTCCAAAGGGGGGATCAAGCATCTATAATAGGAGGGGCTATAGAGTTTGTGAGGGAATTAGAGCAGCTTCTTCAGTGTTTGGAGTCACAAAAGAGAAGGAGATTACTAGGAGAAGCTCATTCTTCTTCTTCATCTCTTGGGATACAACAAGTACAAGCTCCTCCATTTTTTCCACCTTTGGCTCCTTTGCCTAATAATGATCAGGGGATGAAGCTTGTTGATTTTGATCAGAGTGGTCTGAGGGAAGACACAGCAGAGAATAAGTCTTGTTTGGCTGACGTGGAAGTGAAGCTTTTAGGGTTTGATGCTATGATCAAGATCTTGTCAAGAAGAAGACCTGGACAGTTGATCAAGACCATTGCTGCACTTGAAGATTTGCAGCTTATTATCCTCCACACTAATATCACTACTGTTGAACAAACTGTTCTTTATTCTTTCAACGTCAAGGTTGCAGGTGATTCAAGGTTCACAGCGGAAGACATAGCCAGTTCTGTCCAACAGATATTCAGTTTCATTCATGAGAACACTGGAATGTAA 1341 0.4198 MLFFSNNTNNNIDLLESLPPQAPPPFPQNFNTVPVDYSHHNLMKFRIGEASGESSNSGMQDYTQAAAGVGYYGAPAPSSSSFDKLNFTDVMHFSDFGPKLALNNNNCTTNEEGVEEEGEDHSAGGMMDPVLFLKFPVLNDKSLVEDHNLMPAGAPEDQGVSDHSHNNNNNSNRLVHQHHHHHQQQGLFLGEEEEMEKNNSNPTSTVQENNNNTNTNNNSKSKRKRPRTIKTSEEVESQRMTHIAVERNRRKQMNEHLRVLRSLMPGSYVQRGDQASIIGGAIEFVRELEQLLQCLESQKRRRLLGEAHSSSSSLGIQQVQAPPFFPPLAPLPNNDQGMKLVDFDQSGLREDTAENKSCLADVEVKLLGFDAMIKILSRRRPGQLIKTIAALEDLQLIILHTNITTVEQTVLYSFNVKVAGDSRFTAEDIASSVQQIFSFIHENTGM 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi09g2222 446 MobiDBLite consensus disorder prediction 199 219 - -
Mibi09g2222 446 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 237 288 IPR011598 GO:0046983
Mibi09g2222 446 PANTHER TRANSCRIPTION FACTOR FAMA 166 437 IPR044283 GO:0003700|GO:0010052
Mibi09g2222 446 CDD ACT_UUR-ACR-like 372 436 - -
Mibi09g2222 446 MobiDBLite consensus disorder prediction 148 240 - -
Mibi09g2222 446 Gene3D - 216 303 IPR036638 GO:0046983
Mibi09g2222 446 SMART finulus 243 294 IPR011598 GO:0046983
Mibi09g2222 446 CDD bHLH_AtFAMA_like 240 313 - -
Mibi09g2222 446 FunFam Basic helix-loop-helix transcription factor 228 303 - -
Mibi09g2222 446 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 237 305 IPR036638 GO:0046983
Mibi09g2222 446 MobiDBLite consensus disorder prediction 184 198 - -
Mibi09g2222 446 Pfam Helix-loop-helix DNA-binding domain 238 289 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi09g2222 Mibi-ChrMibi09 41527245 41528863 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi09g2222 36 446 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G24140 55.787 1.37e-136 396
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mibi09g2222 HLH 9.8e-10 No_clan