Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi09g2202 ATGGCGAGATACCGAAGTCGGAGCAGAAGCAACAGCCCTCGCCGGCGAAGCCGAACCCCTCCGCGTTCACGTAAGCGCTACGACGACGATCGCCACCGTGAAACCAGGTCCTACAGAGACCGCCGCTCTCCTGCTCCTTCTGGCTTGCTTGTCCGTAATCTCCCTCTCGATGCCAGGCCTGAAGATCTTAGGGGCCCCTTTGAGCGCTATGGCCCTGTGAAAGATGTCTATCTTCCTAAGAATTACTACACTGGTGAGCCCCGGGGCTTTGGCTTTGTAAAGTACCGGTATGCTGAAGATGCTGCTGAAGCAAAGCAACAACTTAATCATACTGTTATTGGTGGACGTGAAATAAGAATTGTGTATGCTGAGGAAAACAGGAAAACTCCTCAAGAAATGCGTGTGAATACTCGTGGAAGTAGTCGATATGGAGGAAGTGGTAGAAGGAGAACTCCCACAAGATCCCCAAGGCGCCGATATCGTTCATACTCAAGGTCTCTATCACCAGCTGGGGATCACAGAAGGGATCATAGGGGCAAGGATGATTATTACTCTCCTGAGCGATCAAGATCTTATTCCAGGTCTCCTTCGCCGCGTGGAAGGAAGGATTACGGGAGGTCCCCAACGCCAAGGGAGAATGGTCGGAGTCCTGACGACAGGAAGGATCATACACGTAGCGGATCAGAGGGTCCCAGGGGTAATGGTCGCAGTCCATCAAGGTCTCGTTCACGATCATACAGTCCTCGTTGA 750 0.5227 MARYRSRSRSNSPRRRSRTPPRSRKRYDDDRHRETRSYRDRRSPAPSGLLVRNLPLDARPEDLRGPFERYGPVKDVYLPKNYYTGEPRGFGFVKYRYAEDAAEAKQQLNHTVIGGREIRIVYAEENRKTPQEMRVNTRGSSRYGGSGRRRTPTRSPRRRYRSYSRSLSPAGDHRRDHRGKDDYYSPERSRSYSRSPSPRGRKDYGRSPTPRENGRSPDDRKDHTRSGSEGPRGNGRSPSRSRSRSYSPR 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi09g2202 249 FunFam Serine/arginine-rich SC35-like splicing factor SCL28 2 140 - -
Mibi09g2202 249 SUPERFAMILY RNA-binding domain, RBD 46 151 IPR035979 GO:0003676
Mibi09g2202 249 SMART rrm2_1 48 121 IPR003954 GO:0003676
Mibi09g2202 249 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 47 125 IPR000504 GO:0003723
Mibi09g2202 249 MobiDBLite consensus disorder prediction 22 41 - -
Mibi09g2202 249 MobiDBLite consensus disorder prediction 1 49 - -
Mibi09g2202 249 MobiDBLite consensus disorder prediction 133 148 - -
Mibi09g2202 249 MobiDBLite consensus disorder prediction 168 229 - -
Mibi09g2202 249 MobiDBLite consensus disorder prediction 124 249 - -
Mibi09g2202 249 Gene3D - 2 137 IPR012677 -
Mibi09g2202 249 MobiDBLite consensus disorder prediction 1 21 - -
Mibi09g2202 249 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 49 119 IPR000504 GO:0003723
Mibi09g2202 249 PANTHER TRANSFORMER-2 SEX-DETERMINING PROTEIN-RELATED 44 246 - -
Mibi09g2202 249 MobiDBLite consensus disorder prediction 230 249 - -
Mibi09g2202 249 SMART rrm1_1 48 121 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi09g2202 Mibi-ChrMibi09 41316247 41320135 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi09g2202 39 226 Eukaryotic Initiation Factors Gene Family AT1G22760 24.155 2.39e-07 49.3