Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi09g2201 ATGGAAACCCAATCTCCTTCTACTCCTACACCTCTTCAATCATCTTCTTTGACGCAATCTCCGCCACTCGATCGTCCACCGGGGGTTTCTGAAATGGAGGAGGCGCAACATCGTTTCTCCGAGGATTCTTCATCTGTTTGGGACTTGGATTGCCTTTTGGATTTCAGTTTGGACGAGAATTTAGCTCTCTCGTTAGACGATTACAATCCCAATTCCGAGATTCCTCATAATCTGGAGATTCCTACTTCTGATAAGGTCCGTAAGCGAGACCCCAGGTTGACTTGTTCCAATTTCTTGGCTGGTCATGTTCCCTGTGCGTGCCCAGAGGTTGATGCTAAGCTTGAGGAAGAAGGTTTTCCTGGTAAGAAGCGTGCTCGTACTGTACGGTCAACGGCTGGGATTGCGAGGTGTCAGGTGCCTGGGTGTGAGGCAGATATTAGTGAGCTCAAAGGGTATCATCGGAGGCACAGGGTTTGCTTGCGTTGTGCCAATGCTAGTACTGTTATGCTTGATGGGGAGGCCAAGAGATACTGCCAACAGTGTGGAAAGTTTCACATATTATCAGATTTTGATGAAGGTAAACGAAGCTGTAGAAGAAAATTAGAGCGCCACAACAACCGAAGGCGTAGAAAACCTACAGATTCCAGGGCTGCCGAAGATCATGAAGTTCAACCTGCCAAACAGACTGAGGATGATGTGGGAAAAGATAGTTCTCATATAAGCAGTGAGATAAACGACTTGGAAACTGCCCCGGAGCATGAAGATGGACAGCTTCCTGCCCCATGTTCAGCTCCTGATACCCTGAACACTAAAAATGATAGTTCCATGTCCTTTGTTGCATGCGGTGAAACGCAATTGAATGGTGGAAAAGAGAATTCTAACATTTCTTATTCACCATCTTATTGTGAAAAGAGTGCCTACTCCTCTGTGTGTCCAACAGGTCGGGTATCTTTTAAGCTTTATGATTGGAATCCTGCGGAGTTTCCTAGAAGACTACGGCATCAAATATTCCAATGGCTGGCAAGTATGCCTGTTGAGCTGGAGGGTTACATCCGCCCTGGGTGTACAATTTTGACAGTTTTTGTTTCCATGCCTAAATTTATGTGGACAAGGTTACTAGAAGACCCTCTGTATTATGTGCAAGACATAGTAGCTCCAGGAAAGATGCTGTTTGGAAGAGGCACCATATTTGTTCATCTAAATGACACAGTTTTCTGCGTTTTGAAAGATCAAACTTCTTTGATGGAAGTTCAGATAAAAGTGCATGCACCAAGGCTTCACTATGTTCATCCCACTTACTTTGAGGCCGGAAAACCTATGGAATTTGTTGCTTGTGGAAGTAACTTAATGCAGCCTAAATTTAGGCTTCTCGTATCTTTTTCAGGAAAGTATTTAAAGTGTAAATATTGCGTTGCATCTCCTCATGACTGGGTAGGAGATGGCATCTCTTGTGCTTTTGACAGTCAACTGTACAAGATTTGTGTCCCTCATACGGAGTCAAACATATTTGGGCCTGCATTTATTGAGGTGGAAAATGAGTCTGGTTTATCAAATTTCATTCCTGTACTCATTGGTGACGCAGAAATCTGCTCTGAATTGGAGACAATGCAACAAAAACTAGATATATCTCTTCTTTCGAAACAAATGCAGGCTGCATCTGGCAGTTCTAGTTGCAGCTTATGTGAAGCTTTTGCACTGAGACATACAGCATATTCAGACTTACTGTTAGATATAGCATGGCTGCTTAAGGATCCTACTTCAGAAGATTTTCATAGAGCCATGACAGCTTCACAGGTTCAAAGATTTTGTTATTTGATAGACTTTCTGATGAGCAATGGATTAGTTGTCATTTTGGGAAAAATATTACGGAATTTGAAGCTTTTGACAGAAAGCATGGAAATGAACAATGTGATTAACAGAATGAGTGAGGCTGACATGACATTACTATTGAAACACACGTGTCAAGCCAGAGAGTTCATATATCAGAAACATCAGAGGAGTGGAGATTTTGCCTCGCACTCTGTTTTTTCTGAAATGGAAGAACATGAAGTTGCTCCAAGCTGCTATGAAGATGACATGGCATCAGTTGTCACTATCTGTAATCAGGGTGCCGAGTCAAGGGCAGATGCTAAATTGGGAGTGAGAAGTCCAACTTGGGTTGGCAAAAGTGAAAGGTTACCTCTTTTGAGGAGTGATATTATAATGAACATGGAAGAGTTGCCTCGGAGATCAGGATATCGGTATCTGGCAAGGCGGCCGGCCATTCTCATGATTGCTTCAGTCGCTGTGTGTTTTGGGGTTTGTGCAGCCCTCCTTCATCCTGGGAGGGTTGGTGAGTTAGCAGTATCCATTAGAAGGTGCTTGTTCAGCAAATCATAG 2379 0.4334 METQSPSTPTPLQSSSLTQSPPLDRPPGVSEMEEAQHRFSEDSSSVWDLDCLLDFSLDENLALSLDDYNPNSEIPHNLEIPTSDKVRKRDPRLTCSNFLAGHVPCACPEVDAKLEEEGFPGKKRARTVRSTAGIARCQVPGCEADISELKGYHRRHRVCLRCANASTVMLDGEAKRYCQQCGKFHILSDFDEGKRSCRRKLERHNNRRRRKPTDSRAAEDHEVQPAKQTEDDVGKDSSHISSEINDLETAPEHEDGQLPAPCSAPDTLNTKNDSSMSFVACGETQLNGGKENSNISYSPSYCEKSAYSSVCPTGRVSFKLYDWNPAEFPRRLRHQIFQWLASMPVELEGYIRPGCTILTVFVSMPKFMWTRLLEDPLYYVQDIVAPGKMLFGRGTIFVHLNDTVFCVLKDQTSLMEVQIKVHAPRLHYVHPTYFEAGKPMEFVACGSNLMQPKFRLLVSFSGKYLKCKYCVASPHDWVGDGISCAFDSQLYKICVPHTESNIFGPAFIEVENESGLSNFIPVLIGDAEICSELETMQQKLDISLLSKQMQAASGSSSCSLCEAFALRHTAYSDLLLDIAWLLKDPTSEDFHRAMTASQVQRFCYLIDFLMSNGLVVILGKILRNLKLLTESMEMNNVINRMSEADMTLLLKHTCQAREFIYQKHQRSGDFASHSVFSEMEEHEVAPSCYEDDMASVVTICNQGAESRADAKLGVRSPTWVGKSERLPLLRSDIIMNMEELPRRSGYRYLARRPAILMIASVAVCFGVCAALLHPGRVGELAVSIRRCLFSKS 792
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi09g2201 792 MobiDBLite consensus disorder prediction 201 269 - -
Mibi09g2201 792 Pfam SBP domain 137 211 IPR004333 GO:0003677
Mibi09g2201 792 MobiDBLite consensus disorder prediction 1 23 - -
Mibi09g2201 792 Gene3D - 133 198 IPR036893 GO:0003677|GO:0005634
Mibi09g2201 792 ProSiteProfiles Zinc finger SBP-type profile. 134 211 IPR004333 GO:0003677
Mibi09g2201 792 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 43 608 IPR044817 GO:0003677
Mibi09g2201 792 MobiDBLite consensus disorder prediction 1 41 - -
Mibi09g2201 792 MobiDBLite consensus disorder prediction 212 253 - -
Mibi09g2201 792 SUPERFAMILY SBT domain 135 215 IPR036893 GO:0003677|GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi09g2201 Mibi-ChrMibi09 41300428 41306595 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi09g2201 43 785 SBP-box Gene Family AT5G18830 46.497 0.0 673
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Mibi09g2201 SBP 5.2e-28 No_clan