Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi09g2196 ATGAGGAACTTTTGGCGATGGACCACAAATGCATGCATAGTTGTTGATATCATCTTCTCCGCCATGGACAACGTTCGGCGTTCCCCAAGCCTTGAGATATATTTATTGGGGCACGCTGAATCGGTTGAATTAGAGAAGGGAGACTCAAAAACGAAGAAGAAGGCTTCAAAAGGCAGGAAGGCACGGTCCGCGTATTCTGATTCAGTTAGAGAATTGGACTTGAATTCTTTAGGCATCAAAGAAGAGGGAACATCGGAATGTTCTGATAGTGGAGACACGGTTGAGGACTGCTGTAAAATTGTAGAGGTCGGAGCTTCTTCTTCCAATGCCAACACTTCTAATTCAGAATGTCGGCCAGATACTGCAAGCAATAATCAGTGGCGTGGCTTGATTCGTTTCATGAAGAAAGGATCCCACAATCGCTTAACTCATCCACCTAAAAATGTCCCCAAACTCACTCGAAAAACGGTTAAAGGAAACAAACAAGACCTCATCTCTAGTCAACATCCTTCGGCTCCAACCTCACCTTTCAAACAAGACCTCATCCCCGGTCAACATTTTTCAGATCCAACCCCACCTCTTTATCCAAAATCTTGCTTCAAGCCTTCATGGGAAAATTATTCTTTTGAACAGCTCAAATCTGCCACCAACAACTTCAGTGATGATTTGTTGATTGGGAAGGGAGGATATGCTGAGGTTTACAAAGGAAAAATGGATGATGGGAAATATGTTGCCATCAAACGGCTGATGAGAGGAAGCCCAGAAGAAATGACAGCTGATTTCTTGTCTGAACTTGGTATTATAGTACATGTTGATCATCCCAATATTGCCAAATTGATTGGTTATGGTGTGGAAGGAGGCATGTTTCTTGTTCTTCAGTTATCTCCGCATGGCAGCCTCGCAGGCATACTTTATGGGCCTCGAGAGAGACTGGATTGGAACATCAGATTTAAGGTTGCTGTAGGGACTGCTGAGGGTATTCAGTATCTGCATGAGGGATGTCAAAGAAGGATCATTCACAGAGATATCAAGGCTGCTAATATTCTGCTCTCAGAGGATTTTGAGCCTCAGGTAGCTGATTTTGGGCTTGCAAAGTGGTTACCTGATCAGTGGACTCACCATACTGTGGACAAAGTTGAAGGCACATTTGGTTACCTTCCTCCCGAATTCTTCATGCATGGTATAGTTGACGAAAAGACCGATGTGTTTGCATATGGAGTGCTACTATTAGAGCTCATCACAGGGAGACAGGCTTTGGATAGCTCTCAGAAAAGTTTGGTGATGTGGGCAAAACCTTTGCTGTCTGTGGATAAAATCAAAGAGCTGGTTGATCCATGTCTAAGTGATGCTTATGATGTAGAACAGATGAAAATTGTTATGATGATAGCTTCCTTGTGTATAGAGCAGTGTTCAGTTGAGCGACCGCAAATGAGTGAGGTTGTGAAGACTTTAAAAGGAGATGAGGAGGTCTTCAAGTTCATGATGGAGAGGCAGAAGTCAAAACTAAGAAGGGCATATTCAGTAGAGTTGCTAGACGCAGAGGATTACAATTCAACCAAGTATTTGAGCTTGGCTGACAAGAGTCGAGAGGCCAGCCCAAAGTCTTTGAACGAAGAAAACATACACAATTAG 1632 0.4332 MRNFWRWTTNACIVVDIIFSAMDNVRRSPSLEIYLLGHAESVELEKGDSKTKKKASKGRKARSAYSDSVRELDLNSLGIKEEGTSECSDSGDTVEDCCKIVEVGASSSNANTSNSECRPDTASNNQWRGLIRFMKKGSHNRLTHPPKNVPKLTRKTVKGNKQDLISSQHPSAPTSPFKQDLIPGQHFSDPTPPLYPKSCFKPSWENYSFEQLKSATNNFSDDLLIGKGGYAEVYKGKMDDGKYVAIKRLMRGSPEEMTADFLSELGIIVHVDHPNIAKLIGYGVEGGMFLVLQLSPHGSLAGILYGPRERLDWNIRFKVAVGTAEGIQYLHEGCQRRIIHRDIKAANILLSEDFEPQVADFGLAKWLPDQWTHHTVDKVEGTFGYLPPEFFMHGIVDEKTDVFAYGVLLLELITGRQALDSSQKSLVMWAKPLLSVDKIKELVDPCLSDAYDVEQMKIVMMIASLCIEQCSVERPQMSEVVKTLKGDEEVFKFMMERQKSKLRRAYSVELLDAEDYNSTKYLSLADKSREASPKSLNEENIHN 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi09g2196 543 MobiDBLite consensus disorder prediction 45 67 - -
Mibi09g2196 543 SMART serkin_6 219 459 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi09g2196 543 ProSiteProfiles Protein kinase domain profile. 219 491 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi09g2196 543 PANTHER OS08G0249100 PROTEIN 63 518 - -
Mibi09g2196 543 FunFam receptor-like cytosolic serine/threonine-protein kinase RBK2 296 498 - -
Mibi09g2196 543 SUPERFAMILY Protein kinase-like (PK-like) 204 505 IPR011009 -
Mibi09g2196 543 ProSitePatterns Protein kinases ATP-binding region signature. 225 247 IPR017441 GO:0005524
Mibi09g2196 543 FunFam Receptor-like cytosolic serine/threonine-protein kinase RBK1 196 294 - -
Mibi09g2196 543 Gene3D Transferase(Phosphotransferase) domain 1 296 508 - -
Mibi09g2196 543 Gene3D Phosphorylase Kinase; domain 1 196 293 - -
Mibi09g2196 543 ProSitePatterns Serine/Threonine protein kinases active-site signature. 338 350 IPR008271 GO:0004672|GO:0006468
Mibi09g2196 543 Pfam Protein tyrosine and serine/threonine kinase 225 484 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi09g2196 Mibi-ChrMibi09 41266831 41270432 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi09g2196 208 493 Receptor kinase-like Gene Family AT4G02010 42.761 4.76e-69 234
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Mibi09g2196 PK_Tyr_Ser-Thr 3.6e-39 CL0016