Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi09g2164 ATGTCAGGTCCTGAGTGCTGCTCAAACCCACCAATCCTGGACCCAAACTCTGGAGCAGGCCACGTTCAAAAACTTGGTGGCCTCAACTCTTACGTCACTGGCCTCTCCAATTCTAAGCATGCCATTCTTTTGGTGTCAGAAGTTTTTGGATATGAAGCTCCTATTTTAAGGAAGCTTGCAGACAAGATTGCAACTAAAGGGTACTTTGTAGTGGTTCCTGATTTCTTGTATGGAGATCCCTTTGCCTACGAAAATGCCAGCAGACCTCTGCAAGTTTGGCTAAAAGATCATGATCCAGAAAAAGCATTTGAAGATGCAAAACCAGTAATTGAAGCCTTAAAAAGTATGGGAGCTTTGGCTATTGGGGCTGCATCTTTTTGTTGGGGTGCAAAGTGTGTTGTAGAACTTGCCAAATCTGAAATGATTCAAGCTGCTATACTATTTCATCCATCACTTATTACTGTGGATGACATCAAGGGGGTTAATATACCAATTGCAATACTTGGAGCTGAGATTGACGAATACTGTCCTCCAGAACTAGTGAAACAGTTTGAAGGGGTCCTAACTGCTCAACTTGGGGATGATTGTTATGTGAAGGTCGTTCCGAAGGTGTGTCACGGATGGACTGTAAGGTACAACATGGAAGATGAAGAAGCTGTGATGGCTGCAGAGGCAGCCCATCAGAAATTATTGGCTTGGTTTGCTAAGCATGCATTTCGTTTTGTTCTCCTCTTTCCCCTAGCGTTTGCAGCTTCCAAAACCAGCGCCGTCGCTCGGAGGCTCCGCTGTTCTAACCTGCACGACGAAGAATTAGTACTTTTGACAATGGTGAGGGTTAGTGTTTTGAATGATGCTCTCAAGAGCATGTACAATGCCGAGAAAAGGGGAAAGCGTCAGGTCATGATTCGGCCATCCTCAAAAGTCATCATCAAATTCCTTTTGGTCATGCAGAAGCATGGATACATTGGAGAGTTCGAATACGTGGATGACCACAGAGCTGGCAAAATTGTGGTTGAGCTGAACGGAAGATTGAATAAATGTGGGGTCATTAGTCCCCGATTTGATGTGGGTGTCAAGGAGATAGAACCCTGGACTGCAAGGCTTCTTCCTTCAAGACAGTTTGGCTACATTGTCTTGACAACCTCAGCTGGTATTATGGATCATGAAGAGGCTAGGAGAAAGAATGTTGGTGGGAAAGTGTTGGGTTTCTTCTACTAG 1218 0.4466 MSGPECCSNPPILDPNSGAGHVQKLGGLNSYVTGLSNSKHAILLVSEVFGYEAPILRKLADKIATKGYFVVVPDFLYGDPFAYENASRPLQVWLKDHDPEKAFEDAKPVIEALKSMGALAIGAASFCWGAKCVVELAKSEMIQAAILFHPSLITVDDIKGVNIPIAILGAEIDEYCPPELVKQFEGVLTAQLGDDCYVKVVPKVCHGWTVRYNMEDEEAVMAAEAAHQKLLAWFAKHAFRFVLLFPLAFAASKTSAVARRLRCSNLHDEELVLLTMVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIEPWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi09g2164 405 FunFam 40S ribosomal protein S15a 276 344 - -
Mibi09g2164 405 Gene3D - 345 405 - -
Mibi09g2164 405 PANTHER DIENELACTONE HYDROLASE 1 237 - -
Mibi09g2164 405 FunFam 40S ribosomal protein S15a 345 405 - -
Mibi09g2164 405 Gene3D - 276 344 - -
Mibi09g2164 405 ProSitePatterns Ribosomal protein S8 signature. 375 392 IPR000630 GO:0003735|GO:0005840|GO:0006412
Mibi09g2164 405 SUPERFAMILY alpha/beta-Hydrolases 34 237 IPR029058 -
Mibi09g2164 405 Pfam Dienelactone hydrolase family 31 237 IPR002925 GO:0016787
Mibi09g2164 405 Hamap 30S ribosomal protein S8 [rpsH]. 277 405 IPR000630 GO:0003735|GO:0005840|GO:0006412
Mibi09g2164 405 SUPERFAMILY Ribosomal protein S8 279 405 IPR035987 GO:0003735|GO:0005840|GO:0006412
Mibi09g2164 405 Pfam Ribosomal protein S8 282 405 IPR000630 GO:0003735|GO:0005840|GO:0006412
Mibi09g2164 405 Gene3D alpha/beta hydrolase 28 239 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi09g2164 Mibi-ChrMibi09 40999052 41006424 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi09g2164 276 405 Cytoplasmic Ribosomal Protein Gene Family AT5G59850 96.923 2.57e-89 264