Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi09g2156 ATGAATATCGTCTCACATTCTGTCTGCCAACAAGTGCGTCCCTTAGTGACTTTCCAAAGGGGACTCCCCATGGACCCATTTTTCCGGCAACCCCGTAAGGACAAGCTCGTCATCATCCTCGGCGCCACCGGCACCGGAAAATCCCGCCTCGCCATCGACCTCGCCGCCTGCTTCCCGCCGGCCGAGATCGTCAATTCCGACAAAATGCAAGTCTACGACGGCCTAGACATCACCACCAACAAGGTCACCGACGAAGAATGCCGAGGAATCCCCCACCACCTCATCGGAATCGCCGATCCTAACTCCGATTTCACCGCCGACGACTTCACCCGCCACGCCTCCGCCGCCATCGACTCCATCGTCCGCCGCGATTGCCTCCCCATTGTCGCCGGCGGCTCCAATTCCTACATCAAAGCCCTCGTCGAGGACGACGACGCCGCTTTTCGATTGACATATGACTGCTGCTTCCTCTGGGTGGACGTTTCCCCTCAATTCCTCGACCCCTTCCTCTCCAAACGGGTCGATCGGATGGTCCAATCGGGTCAAATCGACGAGGTGCGCGCTTTTTTCGACCCCAACGCCGATTACAATACCGGAATCAGACGAGCCGTCGGAGTCCCCGAATTCGATGAATTCCTCCGAACAGAGGATACCGCCGATGAAGGGACAAAGAAGAGGCTACTAGATACCGCCATTGCTAAGATTAAGGCCAACAATTGCTCCCTCGCCCGCCGGCAGTTTCAGAAGATTCTTCGCCTTTACAACATGTGGAAGAGAGACATGTATCGCCTTGATGCAACCGAGGTTTTCAAGAACTCCGGCGACAAAGCAGAGCAGCTTTGGCAGAGTAACGTGCTTGCTAAAAGTCAGAGGATTGTGCAAAAATTCCTCTATGACGACAGTACGGTGGTTCCGGCCGCCGCATCAGTAATGTCGACAGTGGCGCCGCCGTATCAGCAGCCGAAGCAGGTGGCCATGGCTACGGCAGGTCATTAG 996 0.5602 MNIVSHSVCQQVRPLVTFQRGLPMDPFFRQPRKDKLVIILGATGTGKSRLAIDLAACFPPAEIVNSDKMQVYDGLDITTNKVTDEECRGIPHHLIGIADPNSDFTADDFTRHASAAIDSIVRRDCLPIVAGGSNSYIKALVEDDDAAFRLTYDCCFLWVDVSPQFLDPFLSKRVDRMVQSGQIDEVRAFFDPNADYNTGIRRAVGVPEFDEFLRTEDTADEGTKKRLLDTAIAKIKANNCSLARRQFQKILRLYNMWKRDMYRLDATEVFKNSGDKAEQLWQSNVLAKSQRIVQKFLYDDSTVVPAAASVMSTVAPPYQQPKQVAMATAGH 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi09g2156 331 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 33 297 IPR039657 -
Mibi09g2156 331 FunFam Adenylate isopentenyltransferase 5, chloroplastic 163 261 - -
Mibi09g2156 331 Pfam IPP transferase 70 143 - -
Mibi09g2156 331 Pfam IPP transferase 151 248 - -
Mibi09g2156 331 Gene3D - 33 297 IPR027417 -
Mibi09g2156 331 Gene3D Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain 163 261 - -
Mibi09g2156 331 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 36 146 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi09g2156 Mibi-ChrMibi09 40910236 40911231 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi09g2156 152 297 C2H2 Transcription Factor Family AT2G27760 29.480 3.32e-16 77.4