Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi09g2151 ATGGGAAATTTATGGAGTAGCAGAAGAAGAAACAATTACCTTCAATACCCACCGCCGCCGCCACCTCATCATCATCATCATCTCCCACCTCCTTATTACTATTCCGGCGATACCCATCTTCCTCCTCCTCCGCCGCCACCTCCGCCGCAAGGCTATTATCTCACCAATACGCCTCCGCCGCCGCAAAATCCTCATGCCCATTCATTCAATTACTCAAATGGGCAAAACCATTGCCCCAACTACGCAAATTCTATGACGGGTCGGTTTCAGTATCAGCCTTATTATGTGAATCACGGTACTACTGCTGCTGGTGGTTGGCCTCCCATTCGTCCTCCTCCTCTTCCTCCGGTCAACCCCCCACCTCCCTATGTTGATCATCAAACTGCTAAGAAGGTCAAAAATGAAGTCAATGTTCATAAAGATACTTTGCGCCTTGAGTTGGATGAGCATCATCCTGACCACCACTTGGTTTCTTTTGTTTTTGATGCCTTGTATGATGGGAGCATTTCTATAATCTACTTTGCCAAGGAAGTAGAAACATGCAAGTTCACTCCGCTGTTTCCTGAAATTGAGCCAGTCAGAATCCCTTTCCAGAAAGGAGCTGGACAAAAGTTTTGTCAGCCTTCAGGAACTGGCATTGACCTGGGCTTCTTTGAGTTGGATGATCTCTCAAAACCCTCAGAAGGAGAAGATGTTTTTCCCCTTGTGGTATGTGCTGAAACATATTCAATAACTCCTCCAGTGGATGAAAGCTTTGGTGATTCGATGGCTAATGTATCAGCTAACAAGCAGATAACTCAAGCTGTTATAGAGAAAAGCAATGGTAGTGGTTCTTTCCAGGTAAAAGTAATTAAGCAGATTTTGTGGATTGATGGAGTCCGTTATGAATTAAGAGAGATATATGGAATTGGAGGCTCAACAGCAGCAGATTTCAATGACAATGATCCTGAGAAGGAGGAGTGTGTGATATGCATGACTGAACCAAAGGACACTGCTGTCTTACCTTGTCGGCATATGTGTATGTGCGGTGAGTGCGCCAAAGCTTTGAGGCTTCAATCAAATAAATGCCCTATATGCCGTCAGTCTATTGAGGAACTTATAGAAATCAAGATAAATAATGTGCGCAAGTTTGAGCGGAAATCATGTATTTCTTGCCTTGAGGGAGTAGTTCTGTACTGGTATGAAGTTAATGATGCTGGCCTTAATTGTAACTTTGAGCTCTGA 1224 0.4412 MGNLWSSRRRNNYLQYPPPPPPHHHHHLPPPYYYSGDTHLPPPPPPPPPQGYYLTNTPPPPQNPHAHSFNYSNGQNHCPNYANSMTGRFQYQPYYVNHGTTAAGGWPPIRPPPLPPVNPPPPYVDHQTAKKVKNEVNVHKDTLRLELDEHHPDHHLVSFVFDALYDGSISIIYFAKEVETCKFTPLFPEIEPVRIPFQKGAGQKFCQPSGTGIDLGFFELDDLSKPSEGEDVFPLVVCAETYSITPPVDESFGDSMANVSANKQITQAVIEKSNGSGSFQVKVIKQILWIDGVRYELREIYGIGGSTAADFNDNDPEKEECVICMTEPKDTAVLPCRHMCMCGECAKALRLQSNKCPICRQSIEELIEIKINNVRKFERKSCISCLEGVVLYWYEVNDAGLNCNFEL 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi09g2151 407 FunFam probable E3 ubiquitin-protein ligase LOG2 304 370 - -
Mibi09g2151 407 MobiDBLite consensus disorder prediction 1 72 - -
Mibi09g2151 407 SUPERFAMILY RING/U-box 315 366 - -
Mibi09g2151 407 MobiDBLite consensus disorder prediction 14 28 - -
Mibi09g2151 407 ProSiteProfiles Zinc finger RING-type profile. 321 360 IPR001841 -
Mibi09g2151 407 PANTHER MAHOGUNIN 1 374 IPR045194 GO:0061630
Mibi09g2151 407 CDD mRING-HC-C3HC5_MGRN1_like---blasttree 320 360 IPR045195 -
Mibi09g2151 407 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 306 372 IPR013083 -
Mibi09g2151 407 Pfam Zinc finger, C3HC4 type (RING finger) 318 365 - -
Mibi09g2151 407 SMART ring_2 321 359 IPR001841 -
Mibi09g2151 407 MobiDBLite consensus disorder prediction 35 65 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi09g2151 Mibi-ChrMibi09 40852798 40858024 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi09g2151 29 373 C3H Transcription Factor Family AT3G06140 54.545 4.32e-98 295