Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi09g2148 ATGTCTCACATAACAGTGGAGAGGAACAGAAGAAGACAGATGAATGAACATCTCAAAGTGTTAAGATCAATGACCCCACGTTTCTATATCAAAAGGGGAGATCAAGCATCTATAATAGGGGGAGTGATAGAATTCATAAAGGAGTTACATCAAGTTGTTCAAGTGTTGGAATCCAAAAAAAGGAGGAAGAGTGTGAGCCCTAACCCTAGTGGTGGTCTTGATGATCATCACCATCAAGTTGATAACAAGAAATTGGCTATAGTGGGAGGAGGAGAAGTTAGGTGCAGCTCTTCAGTTTCTGACGTGGAAGTCAAAATATCAGGCCCCAATGTGATAGTGAAAGTGATATCTCAGAGAATTGCAGGTCAACTTGCCAAGATAATAGTTGCTCTAGAAAGGCTTTCTTTTCAAGTTCTTCATCTCAACATCAGTACCATGCACGATATAGTTCTTCATCACTTTGTTCTCAAGATAGGACTGGATTGTGAAGTAAGTCTGCAGGAACTAGCCATGGAAGTGCAACGAAGCTTCTGCTCAGACGCTACTAGCGCTTAA 555 0.4126 MSHITVERNRRRQMNEHLKVLRSMTPRFYIKRGDQASIIGGVIEFIKELHQVVQVLESKKRRKSVSPNPSGGLDDHHHQVDNKKLAIVGGGEVRCSSSVSDVEVKISGPNVIVKVISQRIAGQLAKIIVALERLSFQVLHLNISTMHDIVLHHFVLKIGLDCEVSLQELAMEVQRSFCSDATSA 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi09g2148 184 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 1 66 IPR036638 GO:0046983
Mibi09g2148 184 Pfam Helix-loop-helix DNA-binding domain 2 49 IPR011598 GO:0046983
Mibi09g2148 184 PANTHER TRANSCRIPTION FACTOR FAMA 1 177 IPR044283 GO:0003700|GO:0010052
Mibi09g2148 184 FunFam Transcription factor MUTE 1 66 - -
Mibi09g2148 184 SMART finulus 4 55 IPR011598 GO:0046983
Mibi09g2148 184 Gene3D - 1 63 IPR036638 GO:0046983
Mibi09g2148 184 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 1 49 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi09g2148 Mibi-ChrMibi09 40817206 40818584 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi09g2148 1 180 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G06120 58.706 1.03e-73 219
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mibi09g2148 HLH 5.9e-08 No_clan