Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi09g2140 ATGATGAAGAAAAGCATGATAGAGAAACAACAATCTCCTGAGATTTTGAATGATGCTGCATCAAGCAGCACTGACTGCACAAACGCAATATCTAATAAGCAGCAATATATTATGGTGAAAAACTCTGCTTCTCATTCCTCGCCCACTAAACTTGACCTGAATTATGCTCGCATGGCCATAGCAGAAATGGTGGGTACTTTCATTCTGATGTTCTCTGTGAGTGGAATCATTGCAAGCACACAATATCTGAATGGACAAGTGGGCCTCCTAGAGTATGCAGCTACAGCAGGATTAACAGTGGTTGTGGTAATCTTCTCAATAGGGCCAATCTCTTGTGCTCATGTTAACCCAGCCGTCACAATAGCTTTTGCAACATTTGGTCAATTTCCATGGCTGAAGGTTCCAGCTTATATACTAGCACAAACAGTGGGTTCTGTGTTGGCAACATATATTGGTAGCCTCGTGTATGGGATTAAATCAGATGTTATGATGACAAGGCCAATCCAAGGGACTGTATCAGCCTTCTGGGTGGAGCTTATTGCAACTTTCATCATAATGTTCCTTGCAGCAGCCTTGACAAGTGAACTTCAATCAGTGGGTCATATATCTGGCTTTGTGGTTGGAATAGCTATTGGACTGGCAGTGTTAATCACAGGACCTGTTTCAGGGGGATCAATGAATCCAGCAAGATCATTAGGGCCAGCAATTGTGTCATGGAAATTCAAGGACATATGGATATACATGACAGCCCCCACAAGTGGAGCTCTAGCAGGTGTTCTCTTGTTTCGTTTTCTGCGTCTCAAACACCAACCATGCCCTACTTTCTCGTCCTCTCCAACCACATCTCACGATGCCCATTCCATAATCTAG 870 0.4356 MMKKSMIEKQQSPEILNDAASSSTDCTNAISNKQQYIMVKNSASHSSPTKLDLNYARMAIAEMVGTFILMFSVSGIIASTQYLNGQVGLLEYAATAGLTVVVVIFSIGPISCAHVNPAVTIAFATFGQFPWLKVPAYILAQTVGSVLATYIGSLVYGIKSDVMMTRPIQGTVSAFWVELIATFIIMFLAAALTSELQSVGHISGFVVGIAIGLAVLITGPVSGGSMNPARSLGPAIVSWKFKDIWIYMTAPTSGALAGVLLFRFLRLKHQPCPTFSSSPTTSHDAHSII 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi09g2140 289 Pfam Major intrinsic protein 55 262 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mibi09g2140 289 SUPERFAMILY Aquaporin-like 53 274 IPR023271 -
Mibi09g2140 289 ProSitePatterns MIP family signature. 114 122 IPR022357 -
Mibi09g2140 289 Gene3D Glycerol uptake facilitator protein. 13 273 IPR023271 -
Mibi09g2140 289 PRINTS Major intrinsic protein family signature 245 265 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mibi09g2140 289 PRINTS Major intrinsic protein family signature 57 76 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mibi09g2140 289 PRINTS Major intrinsic protein family signature 177 195 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mibi09g2140 289 PRINTS Major intrinsic protein family signature 133 152 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mibi09g2140 289 PRINTS Major intrinsic protein family signature 208 230 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mibi09g2140 289 PRINTS Major intrinsic protein family signature 96 120 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mibi09g2140 289 PANTHER AQUAPORIN NIP2-1 27 271 IPR034294 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi09g2140 Mibi-ChrMibi09 40716964 40718542 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi09g2140 133 272 Major Intrinsic Protein MIP AT3G06100 58.865 4.04e-54 172