Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mibi09g2134 | ATGGATCCTTTCTCATCTTCCTCTTCTCTCCCTCCTCCTCCTACCCCTCTTTCCGGCATTCTCCCAACATCTCCCTCATCCTCTTCTGCTGCTTTCGACGACGACGCTTCCGATGACTCCTGCAGTATTTGTCTTGAGCCCTTTAGCACCGATGACCCTGCTACTATAACAAATTGCAATCATGAATATCATCTGCACTGTATTCTTGAATGGTCTCAGAGAAGCAAAGAGTGTCCAATCTGTTGGCAGATACTTGTCTTGAAAGAACCAGCCAACCAAGAACTTCTGGCTGCAGTGGAAGCTGAAAAACGCATAAGGTCAAGAAGCTCACATTCATCTGCATTCCTATATCCTCGCGTCCCCATTGAACGGCATAGCGTCGATCACGATGATTCTTGTTCAGACGACTCTGATTTTGATGAACAAATTATGCAGCACCTGGTTGCTGCTGCAAGTAGAGCACATTATTTTCGTAGACGGGAAATGCAAAGATCATCTGGAGTAGGTCCATCTCGGATTCCTGCAGTTGACTCTTCATCTCATGCCTCTGGGCTGCAGCCAATGAATACTACCTCGCCTTCTGGAGTCAGTTCACCTAATTCCAGTTCTGCTGCAGACATTCAACCTCCACCATCTGCTCCTTCCCCCGTCGAAGCAATTATAAGAAATTCCTCTCCTGAAACTGATGACCCTTCCAAAGCCAGAGTCCTTTATAGCCAGCTGCCATCTGAGAGTGTGAGAAGACTGAACACTTCTGAGATGTTTTCCTTCCCTGAGTCCATCAAGACCAAATTTTCTGCTGCCTCAGCGAGATATAAAGAATCTATTTCAAAAAGTACACGCGATCTCAAAGAGAAGTTGCTTGCTCGTAATGCTTCAGTAAAAGAGCTGAGTAAAGGTGTTCAGCGTGAGATGAATGCTGGCATTGCTGGTGTTGCACGTATGATTGAACGCCTTGATCTCGCCTCAAAACGGGCCACTGCTTCTCCTATGCCAAGCTCTACCGTGGTAACTTCTGGCATCCTCTTTAAGGGAAAGACTGTACAAGAAAATGGTAGTGGACAGCCTCTTCACTCTGCTGTTAAGGAAGGGAGTGGAGTTGTCATTCATGATGTTAGATCAGGCCCACATGCACAGGTTTCCAGTGCGGCTGTTAGTCCGGTAGAAGAATATCCTCAACCACATGTTCAGTTGGCTGATTCTTTCCCATGTCCTCAATTTTTAACATCCAGAGTGGACTGGATGAGGTAA | 1251 | 0.4644 | MDPFSSSSSLPPPPTPLSGILPTSPSSSSAAFDDDASDDSCSICLEPFSTDDPATITNCNHEYHLHCILEWSQRSKECPICWQILVLKEPANQELLAAVEAEKRIRSRSSHSSAFLYPRVPIERHSVDHDDSCSDDSDFDEQIMQHLVAAASRAHYFRRREMQRSSGVGPSRIPAVDSSSHASGLQPMNTTSPSGVSSPNSSSAADIQPPPSAPSPVEAIIRNSSPETDDPSKARVLYSQLPSESVRRLNTSEMFSFPESIKTKFSAASARYKESISKSTRDLKEKLLARNASVKELSKGVQREMNAGIAGVARMIERLDLASKRATASPMPSSTVVTSGILFKGKTVQENGSGQPLHSAVKEGSGVVIHDVRSGPHAQVSSAAVSPVEEYPQPHVQLADSFPCPQFLTSRVDWMR | 416 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mibi09g2134 | 416 | SUPERFAMILY | RING/U-box | 35 | 88 | - | - | |
Mibi09g2134 | 416 | Pfam | Ring finger domain | 39 | 81 | IPR001841 | - | |
Mibi09g2134 | 416 | MobiDBLite | consensus disorder prediction | 1 | 34 | - | - | |
Mibi09g2134 | 416 | MobiDBLite | consensus disorder prediction | 162 | 234 | - | - | |
Mibi09g2134 | 416 | CDD | RING-H2 | 43 | 81 | - | - | |
Mibi09g2134 | 416 | MobiDBLite | consensus disorder prediction | 1 | 20 | - | - | |
Mibi09g2134 | 416 | ProSiteProfiles | Zinc finger RING-type profile. | 41 | 81 | IPR001841 | - | |
Mibi09g2134 | 416 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 26 | 98 | IPR013083 | - | |
Mibi09g2134 | 416 | SMART | ring_2 | 41 | 81 | IPR001841 | - | |
Mibi09g2134 | 416 | MobiDBLite | consensus disorder prediction | 172 | 208 | - | - | |
Mibi09g2134 | 416 | FunFam | E3 ubiquitin-protein ligase RHF1A | 24 | 93 | - | - | |
Mibi09g2134 | 416 | PANTHER | ZINC FINGER, RING/FYVE/PHD-TYPE | 7 | 90 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Mibi09g2134 | Mibi-ChrMibi09 | 40665795 | 40668782 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Mibi09g2134 | 39 | 89 | C3H Transcription Factor Family | AT4G23450 | 50.980 | 2.64e-13 | 65.5 |