Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi09g2130 ATGCAAGAATTTCTGGGTTCTGTTCGCCGATCTTTGGTTTTCAGGAGCCCAGGCGGTGGGGACGATGGAGGGTTTGGTGTTGGAGGCTTCGTTGATAAGATTGGCTCCACCATTCGAAAATCTCGAAATGGCCTCTTCTCTCAGCCACGTGTTAGGGCTCTTCCGCCGGTTCCCAAGGACAATACTCCCCCGATCCGGTGGCGCAAGGGCGAGTTGATTGGTTGTGGTGCCTTTGGTCGAGTCTACATGGGTATGAATCTTGATTCTGGGGAGCTTATTGCTGTCAAGCAGGTTTTAATCGCGGCAAGGAGTGCTTCGAAAGAGAAAACACAGGCTCATATTATGGAACTTGAAGAAGAAGTGAAGCTTCTCAAGAATCTTAAACATCCAAATATTGTTAGATACCTGGGAACTGCTAGGGAGGAGGATTCCTTGAATATCCTGCTGGAATTTGTGCCCGGAGGATCTATCTCATCACTCTTGGGGAAATTTGGATCCTTTCCTGAGTCTGTAATAAAAATGTACACGAAACAACTTTTACTGGGTCTTGAGTATCTTCACAACAATGGAATTATTCACAGAGATATTAAGGGTGCAAACATTCTTGTTGATAATAAAGGATGCATCAAACTCGCAGACTTTGGTGCATCTAAGAAAGTTGTTGAGCTGGCTACCATGAACGGTGCAAAATCAATGAAGGGTACTCCATATTGGATGGCTCCTGAAGTTATTCTGCAGACAGGCCATAGCTTCTCTGCTGATGTTTGGAGTGTTGGATGCACCGTGATAGAGATGGCAACAGGGAAGCCTCCATGGAGTGAACAGTTTCAGGAGGTTGCCGCTCTTTTCCATATCGGGACAACTAAATCCCATCCACCAATACCTGACCATCTTTCTGTTGAGGCAAAGGATTTTTTGTTAAAATGCTTGCAGAAGGAACCGGATCTAAGGCCTTCTGCATCAGATTTGTTACAGCATCCATTTGTCACCTGCGAGTATCAAGAATCTAATCCCACATTATGCAGTTCATTTGTGGAACCTTGCAAGAAGATGGTAGCGTCTGGAACAGATTCTGAAATGTCGGGAATAGGTCTCAAAGATGTTTGTCAGATGGATAGCATAAGATGCTCATCTGTGTCTCCTGAGACTCTTTTAAAATCAGATTTCTATCGAGGAACAAGCAATGATGATGATGACATGTGTCAAATAGATGACCAAGATGATCTTTTTGGTGATGCATCAGTGAAGTCTAAATCTCACATTTCAGATGATGTAAAGAGTTTCAACCCTATGTGTGAACCTATGGATGAATGGCCATGCAATTTTGATAAAAGTTCAGGTTTGGGGATAAAGGGAACAAACTTGTCTCCTGATCAGACAATTAAGACAATGAGAAGCAATGAAGCACCTCAAAAAGTGGAGAATGAATTTTCATTTCCAAGTGAGCCTATAGGAGCTGATGATGATGAAGAAGTCACTGAGTCAAAGATTAGAGCTTTTCTTGATGAGAAGGCTCTGGAACTGAACAAACTCCGAACTCCTCTTTATGAAGAATTCTTTAGCATATCAAACGCAGCTGTTCCTCCCATACCTGTTTCAATGGCGCACAGTGAAGTAGTTTCAGAAGTGTCAAATGTAACGCCAAAAAGCAGGTCACCTTGTCAGGCTAGCAGAAGATACTCAATGGCAGATGGTGCTAATTTTGCTAGGCATGGAAGTCACTACAAAAATCAATCTAAAGTTAGTGGTGCAAATAGTCGGCCTTTGCAGGAAATCCACCCATCTGAGCTTAACGAATGGAAGGAGACACTTCAATATGCCAAGTTGGAATCATTTACTGCTAGCTCAACTTTCTCAGAGATACAAAGGAAATGGAAGGAAGAACTTGTTGAAGAACTTGAGAGGAAGCGAGAGATGATGCGTCAGTCAGGCTTAGGAGGGAAGATTGCATCCCCAACTGATCGCAATTTTCGGAAACTGACAGATAGATCACGGTTTGCATTTCCAAGCTAA 2013 0.4312 MQEFLGSVRRSLVFRSPGGGDDGGFGVGGFVDKIGSTIRKSRNGLFSQPRVRALPPVPKDNTPPIRWRKGELIGCGAFGRVYMGMNLDSGELIAVKQVLIAARSASKEKTQAHIMELEEEVKLLKNLKHPNIVRYLGTAREEDSLNILLEFVPGGSISSLLGKFGSFPESVIKMYTKQLLLGLEYLHNNGIIHRDIKGANILVDNKGCIKLADFGASKKVVELATMNGAKSMKGTPYWMAPEVILQTGHSFSADVWSVGCTVIEMATGKPPWSEQFQEVAALFHIGTTKSHPPIPDHLSVEAKDFLLKCLQKEPDLRPSASDLLQHPFVTCEYQESNPTLCSSFVEPCKKMVASGTDSEMSGIGLKDVCQMDSIRCSSVSPETLLKSDFYRGTSNDDDDMCQIDDQDDLFGDASVKSKSHISDDVKSFNPMCEPMDEWPCNFDKSSGLGIKGTNLSPDQTIKTMRSNEAPQKVENEFSFPSEPIGADDDEEVTESKIRAFLDEKALELNKLRTPLYEEFFSISNAAVPPIPVSMAHSEVVSEVSNVTPKSRSPCQASRRYSMADGANFARHGSHYKNQSKVSGANSRPLQEIHPSELNEWKETLQYAKLESFTASSTFSEIQRKWKEELVEELERKREMMRQSGLGGKIASPTDRNFRKLTDRSRFAFPS 670
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi09g2130 670 MobiDBLite consensus disorder prediction 639 670 - -
Mibi09g2130 670 Coils Coil 622 643 - -
Mibi09g2130 670 FunFam Mitogen-activated protein kinase kinase kinase 2 66 357 - -
Mibi09g2130 670 ProSiteProfiles Protein kinase domain profile. 67 329 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi09g2130 670 Pfam Protein kinase domain 68 329 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi09g2130 670 FunFam Serine/threonine-protein kinase STE11 63 157 - -
Mibi09g2130 670 Gene3D Transferase(Phosphotransferase) domain 1 66 360 - -
Mibi09g2130 670 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 62 339 - -
Mibi09g2130 670 ProSitePatterns Protein kinases ATP-binding region signature. 73 96 IPR017441 GO:0005524
Mibi09g2130 670 SMART serkin_6 67 329 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi09g2130 670 CDD STKc_MAPKKK 66 329 - -
Mibi09g2130 670 SUPERFAMILY Protein kinase-like (PK-like) 66 330 IPR011009 -
Mibi09g2130 670 Coils Coil 107 127 - -
Mibi09g2130 670 ProSitePatterns Serine/Threonine protein kinases active-site signature. 191 203 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi09g2130 Mibi-ChrMibi09 40626176 40632053 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi09g2130 1 648 MAP Kinase Kinase Kinase AT3G06030 58.584 0.0 680
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Mibi09g2130 Pkinase 3.3e-72 CL0016