Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi09g2121 ATGGAGCTTGATAGTAACCGCCAAGATCAGAGCCTTCCTGAGAGGAAAGGCCAGAAGCGTAAGCTCCACCAAGACTTCGACGACCACCACAACCCTCAGATCTCCTCCCCTCCCACCGGCGACGCCCGCGACGCCCTCCTCGCCGAGGTCTCCGCCCAGGTCCAAATCCTCAACTCCAATTTCTCATGGCGTGAACCCGATCGAGCCGCCGCTAAGCGTGCCACTCACGTCCTCGCCGAGCTCGCTAAGAATGAGGAGGTTGTGAACGTGATTGTTGAAGGAGGCGCTGTTCCGTCTTTGGTTAAGCATCTTCAAGCGCCGCCTTCGAGTGATGACGATCGTGGTCAGAGGCCATTCGAGCACGAGGTTGAGAAAGGGAGTGCGTTCGCTCTAGGACTTCTTGCCGTTAAGCCCGAACATCAACAACTAATTGTTGACAATGGCGCCTTAAAACATCTTGTTGATCTGTTAAAGAGACATAAGAATTACTCTTCTTCTCGTGCTGTGAATAGTGTCATTCGTAGGGCTGCAGATGCAATCACTAACCTTGCTCATGAGAACAGCAGCATTAAAACCCGTGTCAGGATGGAAGGTGGAATTCCACCACTCGTTGAATTGCTTGGGTTTACTGATACAAAGGTGCAAAGAGCAGCTGCTGGTGCCTTGCGAACTCTGGCATTCAAAAATGATGAAAATAAAAATCAAATTGTTGAATGCAATGCTCTTCCAACTCTAATTTTAATGCTCCGTTCTGAAGATGCTGCTATTCATTATGAAGCGGTTGGTGTAATAGGGAATCTGGTACACTCTTCACCCAATATAAAGAAAGAAGTTCTTCTTGCTGGGGCTTTACAACCTGTTATAGGATTACTTAGCTCCTGCTGCTCTGAGAGCCAAAGGGAAGCTGCCTTGTTACTTGGTCAGTTTGCGGCAACTGATTCTGATTGTAAGGTTCACATCGTTCAGCGAGGTGCTGTCCGACCTCTGATAGAGATGCTCCAGTCTCCTGATCTACAACTCAGAGAAATGTCTGCCTTTGCTTTGGGGAGACTCGCACAGGATACCCATAACCAAGCTGGTATAGCACACAATGGTGGCTTAGCACCATTACTCAAGCTCCTTGACTCGAAAAATGGGTCTTTGCAGCATAATGCTGCTTTTGCTCTTTATGGCCTTGCAGATAATGAGGATAATGTGTCTGATTTCATTAGGGTAGGTGGTGTTCAGAGACTTCAGGATGGAGAGTTCATTGTTCAAGCAACAAAAGATTGTGTTGCAAAGACATTGAAAAGATTAGAGGAGAAGATTCATGATCGTGTCCTGAGCCATTTGTTATATCTTATGCGAGTTTCAGAGAAGGCTGTCCAAAGACGAGTTGCTTTGGCTCTTGCTCATCTTTGTTCTGTAGATGATCAGAGAACCATATTCATTGATAACAATGGTTTGGAGTTTCTTATTGGGCTTCTTGGCTCTACTAGCCCTAAGCAGCAACTTGATGGCGCTGTTGCTTTATGCAAGTTGGCCAACAAAGCCACAACTCTATCACCAATAGATGGTGCTCCTCCTTCCCCGACACCCCAGGTTTATTTGGGAGAGCAATATGTGAACAATGTTACATTGTCTGACGTAACATTTTTGGTTGAAGGGAAACGATTTTATGCTCACAGAATCTGCCTACTGGCATCTTCAGATGCGTTTCGTGCTATGTTTGATGGTGGTTACAGGGAGAAGGATGCAAGAGACATAGAGATTCCAAATATTAGATGGGAAGTTTTTGAATTGATGATGAGATTCATATACACTGGATCAGTTGATGTGACTCTTGATATTGCCCAAGATCTCCTCAGAGCAGCTGATCAATACCTCTTAGAAGGACTTAAGAGACTCTGTGAGTACGCGATAGCACAGGATATATCACTGGAGAATGTTTCTAGTATGTATGAACTCTCAGAAGCCTTCAATGCAATTTCATTGAGGCACACATGCATCCTTTTTATCTTGGAGCACTTTGATAAATTGAGTGTCAGACCAGGGCACTCTTGTCTTGTTCAGCGTATAATACCGGAGATCCGCAACTACTTTGCCAAAGCTCTCACAAAAGCTAACCCCCGTGACATCCGGCTGTAG 2127 0.457 MELDSNRQDQSLPERKGQKRKLHQDFDDHHNPQISSPPTGDARDALLAEVSAQVQILNSNFSWREPDRAAAKRATHVLAELAKNEEVVNVIVEGGAVPSLVKHLQAPPSSDDDRGQRPFEHEVEKGSAFALGLLAVKPEHQQLIVDNGALKHLVDLLKRHKNYSSSRAVNSVIRRAADAITNLAHENSSIKTRVRMEGGIPPLVELLGFTDTKVQRAAAGALRTLAFKNDENKNQIVECNALPTLILMLRSEDAAIHYEAVGVIGNLVHSSPNIKKEVLLAGALQPVIGLLSSCCSESQREAALLLGQFAATDSDCKVHIVQRGAVRPLIEMLQSPDLQLREMSAFALGRLAQDTHNQAGIAHNGGLAPLLKLLDSKNGSLQHNAAFALYGLADNEDNVSDFIRVGGVQRLQDGEFIVQATKDCVAKTLKRLEEKIHDRVLSHLLYLMRVSEKAVQRRVALALAHLCSVDDQRTIFIDNNGLEFLIGLLGSTSPKQQLDGAVALCKLANKATTLSPIDGAPPSPTPQVYLGEQYVNNVTLSDVTFLVEGKRFYAHRICLLASSDAFRAMFDGGYREKDARDIEIPNIRWEVFELMMRFIYTGSVDVTLDIAQDLLRAADQYLLEGLKRLCEYAIAQDISLENVSSMYELSEAFNAISLRHTCILFILEHFDKLSVRPGHSCLVQRIIPEIRNYFAKALTKANPRDIRL 708
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi09g2121 708 Gene3D Potassium Channel Kv1.1; Chain A 527 670 IPR011333 -
Mibi09g2121 708 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 240 282 IPR000225 GO:0005515
Mibi09g2121 708 MobiDBLite consensus disorder prediction 1 30 - -
Mibi09g2121 708 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 365 407 IPR000225 GO:0005515
Mibi09g2121 708 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 95 149 IPR000225 GO:0005515
Mibi09g2121 708 SUPERFAMILY POZ domain 533 635 IPR011333 -
Mibi09g2121 708 Pfam Armadillo/beta-catenin-like repeat 229 268 IPR000225 GO:0005515
Mibi09g2121 708 Pfam Armadillo/beta-catenin-like repeat 313 352 IPR000225 GO:0005515
Mibi09g2121 708 Pfam Armadillo/beta-catenin-like repeat 194 226 IPR000225 GO:0005515
Mibi09g2121 708 Pfam BTB/POZ domain 535 636 IPR000210 GO:0005515
Mibi09g2121 708 Gene3D - 353 432 IPR011989 -
Mibi09g2121 708 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 148 198 IPR000225 GO:0005515
Mibi09g2121 708 FunFam Armadillo/beta-catenin repeat family protein 532 676 - -
Mibi09g2121 708 SUPERFAMILY ARM repeat 56 412 IPR016024 -
Mibi09g2121 708 Gene3D - 45 352 IPR011989 -
Mibi09g2121 708 SMART arm_5 137 185 IPR000225 GO:0005515
Mibi09g2121 708 SMART arm_5 271 311 IPR000225 GO:0005515
Mibi09g2121 708 SMART arm_5 84 136 IPR000225 GO:0005515
Mibi09g2121 708 SMART arm_5 187 227 IPR000225 GO:0005515
Mibi09g2121 708 SMART arm_5 313 353 IPR000225 GO:0005515
Mibi09g2121 708 SMART arm_5 468 509 IPR000225 GO:0005515
Mibi09g2121 708 SMART arm_5 354 394 IPR000225 GO:0005515
Mibi09g2121 708 SMART arm_5 229 269 IPR000225 GO:0005515
Mibi09g2121 708 Gene3D - 433 516 IPR011989 -
Mibi09g2121 708 CDD BTB_POZ_ARIA_plant 528 643 - -
Mibi09g2121 708 SMART BTB_4 541 638 IPR000210 GO:0005515
Mibi09g2121 708 ProSiteProfiles BTB domain profile. 541 608 IPR000210 GO:0005515
Mibi09g2121 708 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 324 366 IPR000225 GO:0005515
Mibi09g2121 708 SUPERFAMILY ARM repeat 438 612 IPR016024 -
Mibi09g2121 708 MobiDBLite consensus disorder prediction 1 41 - -
Mibi09g2121 708 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 198 233 IPR000225 GO:0005515
Mibi09g2121 708 PANTHER ARM REPEAT PROTEIN INTERACTING WITH ABF2 1 702 IPR044282 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi09g2121 Mibi-ChrMibi09 40508631 40514832 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi09g2121 297 411 U-box Gene Family AT3G46510 29.915 3.14e-06 48.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Mibi09g2121 BTB 9.2e-26 CL0033