Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi09g2112 ATGTTGTCTAAGCATTTTCAAAACGGCATGGAAACGGCGAGGCTTGTTTGGTCGCGGATTCCGAACTCGGAAGATTTGCAGTATATTGATGATGCTGTTGGTCTCTTGAAAAAGAACGATGGAAGCGGTGCTGAGAGTCTTGACTATGAAGTTATAGAGAATTATGCTTACCGAGAAGAACAGGCGCAAAGAGGGAAGCTTTACGTGAGCTACTTACTGGTGGTGAAATGGTTCTTTGCCTTGCTCATTGGCATCGGTACTGGACTTGCTGCCGTTTTCATTAATATATCTGTTGAGAACTTTGCTGGCTGGAAGTTCTCATTGACATTTAATATAATCCAAAAATCATATGTGGCTGGTTTCATTGTATATGCCCTTATCAACTTGGTTTTGGTCTATTCCTCTGTATATATTATCACACAATTTGCACCAGCAGCGGCTGGATCTGGTATTCCTGAAATTAAGGGTTACTTGAATGGAATTGATGTTCATGGTATCCTTCTTTTCAGAACCTTGGTTGGAAAGATTTTTGGTAGCATTGGTTCAGTGGGAGGCGGCCTTGCTTTGGGTAAAGAAGGTCCTCTTGTTCATACTGGTGCATGTATTGCTTCTTTGCTTGGACAAGGTGGATCCACAAAATATCATCTTAATTCGAGGTGGTTTCAAGTATTCAAAAGTGATAGAGACCGCCGTGATCTTGTAACCTGTGGGTGTGCAGCTGGAGTTGCAGCTGCATTTAGAGCTCCAGTTGGTGGTGTATTGTTTGCATTGGAAGAGGTTACATCATGGTGGAGGAGTCAACTGATGTGGCGGGTCTTCTTCACATCGGCTGTTGTGGCTGTTGTGGTTCGTACTGCAATGGGGTGGTGTAAGAATGAGAGGTGTGGACATTTTGGCTCGGGTGGATTCATAATATGGGATGTGTCAGATGGCCAAGAGGATTATTTCTTCGTGGAGCTATTACCAATGGCTATAATTGGGGTTATTGGAGGTTTACTAGGAGCCCTGTTTAACCAGCTTACTCGTTATATTGCTTCTTGGCGCCGTAATTATCTGCACAAAAAAGGGATCCGTGTCAAGATTGTTGAGGCATGCCTTGTCTCACTGTTAACATCAGTTATTTCATTTTGCTTACCGCTTCTCAGAAAATGTAGTCCTTGCCCTGAATCTGATCCTGATTGTCCTCGGCCTCCTGGAATGTATGGGAATTATGTCAATTTCTTTTGTAGCAAAGAAAAGGAATACAATGATCTTGCTACTATTTTCTTTAATACGCAGGATGATGCCATAAGGAACTTGTTCAGTGCAAAGACAATACATGAGTTCAGCGCCCAAAGTTTATTAACCTTTTTGGTTATGTTTTATACTTTAGCCGTGGTGACATTTGGTACTGCTGTTCCTGCTGGTCAGTTTGTTCCTGGAATCATGATAGGATCAACATATGGACGTCTAGTTGGCATGTTTGTTGTAAGACATTACAAAAAGCTCAACATTGAAGAAGGAACGTATGCTCTGCTGGGAGCTGCATCTTTTCTTGGAGGTTCAATGCGGATGACAGTTTCTCTCTGTGTCATTATGGTTGAAATCACAAATAACTTAAAATTTTTACCTCTTATTATGCTTGTTCTTCTTATATCAAAGGCTGTTGGTGATGCCTTTAATGAGGGTCTCTATGAAGAGCAGGCACAACTGAAGGGTATTCCATTGTTGGAACCAAGGCCCAAATATGTGATGCGGAATATGACAGCAAGGGAGGCCTGTGGGAGTGGAATGGTAGTCTCCTTCCCCCGTGTTGTTAAGGTTGCAGATGTAGTTTCTATTCTTCGGAGCAACAAGCACAATGGTTTTCCTGTGATTGATCACACAAGAAGTGGAGAACCACTTGTTATTGGATTAGTGCTGCGAAGTCATTTATTGGTAATTCTGCAATCGAAGGTTGATTTCCAGCTTAGTCCTTTACCGTCTGATCCCAGAGGTGGAGCAAGAATAAGGCATGACTTTGGTGAATTTGCGAAGCCTGTTTCTAGTAAGGGAATATCTATAGATGATATACTTTTAAGTTCAGATGAATTGGAAATGTACATAGATCTTGCCCCTTTTTTGAATCCATCGCCATATATTGTGCCTGAAGATATGTCTTTGTCAAAGGTTTACAATCTTTTCCGCCAACTAGGGTTGAGACATTTATTTGTTGTTCCACGTCCATCTCGCGTGCTTGGCTTGATAACCAGAAAAGACTTATTGATTGAGGACACTGAAACTGTGAATACACGAGAGCTCCAGTCAACTAGAGTAAGGAATGCGGATGCTGAGCGGCCTTTGTTAAATGGCCTTCTGGTTCAGGATTATATTTCTGCCTCGTAA 2364 0.4201 MLSKHFQNGMETARLVWSRIPNSEDLQYIDDAVGLLKKNDGSGAESLDYEVIENYAYREEQAQRGKLYVSYLLVVKWFFALLIGIGTGLAAVFINISVENFAGWKFSLTFNIIQKSYVAGFIVYALINLVLVYSSVYIITQFAPAAAGSGIPEIKGYLNGIDVHGILLFRTLVGKIFGSIGSVGGGLALGKEGPLVHTGACIASLLGQGGSTKYHLNSRWFQVFKSDRDRRDLVTCGCAAGVAAAFRAPVGGVLFALEEVTSWWRSQLMWRVFFTSAVVAVVVRTAMGWCKNERCGHFGSGGFIIWDVSDGQEDYFFVELLPMAIIGVIGGLLGALFNQLTRYIASWRRNYLHKKGIRVKIVEACLVSLLTSVISFCLPLLRKCSPCPESDPDCPRPPGMYGNYVNFFCSKEKEYNDLATIFFNTQDDAIRNLFSAKTIHEFSAQSLLTFLVMFYTLAVVTFGTAVPAGQFVPGIMIGSTYGRLVGMFVVRHYKKLNIEEGTYALLGAASFLGGSMRMTVSLCVIMVEITNNLKFLPLIMLVLLISKAVGDAFNEGLYEEQAQLKGIPLLEPRPKYVMRNMTAREACGSGMVVSFPRVVKVADVVSILRSNKHNGFPVIDHTRSGEPLVIGLVLRSHLLVILQSKVDFQLSPLPSDPRGGARIRHDFGEFAKPVSSKGISIDDILLSSDELEMYIDLAPFLNPSPYIVPEDMSLSKVYNLFRQLGLRHLFVVPRPSRVLGLITRKDLLIEDTETVNTRELQSTRVRNADAERPLLNGLLVQDYISAS 787
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi09g2112 787 PANTHER CHLORIDE CHANNEL PROTEIN CLC FAMILY MEMBER 23 753 - -
Mibi09g2112 787 ProSiteProfiles CBS domain profile. 701 759 IPR000644 -
Mibi09g2112 787 Gene3D Clc chloride channel 69 571 - -
Mibi09g2112 787 SMART cbs_1 704 752 IPR000644 -
Mibi09g2112 787 SMART cbs_1 591 643 IPR000644 -
Mibi09g2112 787 FunFam Chloride channel ClC3 68 385 - -
Mibi09g2112 787 Pfam Voltage gated chloride channel 134 550 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Mibi09g2112 787 CDD ClC_6_like 45 570 - -
Mibi09g2112 787 Gene3D - 592 754 IPR046342 -
Mibi09g2112 787 SUPERFAMILY CBS-domain pair 575 748 IPR046342 -
Mibi09g2112 787 CDD CBS_pair_voltage-gated_CLC_euk_bac 592 748 - -
Mibi09g2112 787 SUPERFAMILY Clc chloride channel 54 572 IPR014743 -
Mibi09g2112 787 Pfam CBS domain 702 748 IPR000644 -
Mibi09g2112 787 Pfam CBS domain 600 642 IPR000644 -
Mibi09g2112 787 PRINTS Chloride channel signature 144 161 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Mibi09g2112 787 PRINTS Chloride channel signature 557 571 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Mibi09g2112 787 PRINTS Chloride channel signature 519 538 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Mibi09g2112 787 PRINTS Chloride channel signature 239 258 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Mibi09g2112 787 PRINTS Chloride channel signature 175 194 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Mibi09g2112 787 PRINTS Chloride channel signature 466 486 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Mibi09g2112 787 PRINTS Chloride channel signature 501 517 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Mibi09g2112 787 PRINTS Plant CLC chloride channel signature 274 284 IPR002251 GO:0005247|GO:0006821|GO:0016020
Mibi09g2112 787 PRINTS Plant CLC chloride channel signature 260 268 IPR002251 GO:0005247|GO:0006821|GO:0016020
Mibi09g2112 787 PRINTS Plant CLC chloride channel signature 292 299 IPR002251 GO:0005247|GO:0006821|GO:0016020
Mibi09g2112 787 PRINTS Plant CLC chloride channel signature 50 58 IPR002251 GO:0005247|GO:0006821|GO:0016020
Mibi09g2112 787 PRINTS Plant CLC chloride channel signature 418 434 IPR002251 GO:0005247|GO:0006821|GO:0016020
Mibi09g2112 787 FunFam Chloride channel protein 693 778 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi09g2112 Mibi-ChrMibi09 40426215 40433483 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi09g2112 1 767 Ion Channels AT5G26240 83.420 0.0 1231