Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi09g2101 ATGGCTTCTTGTATAACCCTGCCTTGTTTTCTTACGCTACTTTCATTCTTAGGCGTCTCACTTGCCCAGGATTCTTCCTCCACCATGAACTTGAATTCCAACATCACTGCTGGATCAAATCATTCTTTGAAATCTCCATCAGGTGATTTTGAATTTGGATTCTACCATCTTCCCGGTGATTACTATCTGGCAGGAATATGGTTTGCAAACACCATCCCTAATAAAACTCTGGTTTGGTACTGGAACCCACCTGTGGAAGCCAATTCAGTTATCCAACTATCTTCAGGAGGCCACCTTTTGCTCACATATCCAAATGGAACCTCTGTTCAGATAGACAGTGGAAATGAGATTAATGCAAGCTCAGTCTCATTGAAAGACAGTGGCAATTTGGTAATGGAAGACTCCACTTCAAGAGTTGTCTGGCAGAGTTTTGATTCTCCTACTAACACAATGCTCCCTGGGCAAACCTTAAGGGAAGATCAAGCGCTCTATTCCAAAGGTAAAGGATCTCTCAACTACTCAAATGGAAACTTCAGGGCATTGATGCAAGAAGATGGGAACTTGTTACTTATTGCTTATCTATGGTCAGATCCTTCTTATTGGTACTCTGATACAGCTAACAATAATAACGTAAGTTTGCAATTCAATGATAGTGCTTATTTGTACCTCACTACTGGCTCCATGAACTTACGTTCTTTAACAAATAACCCTCCAACCCCGACTGGAGATTTTTATCACCGAGCAACAATAGATGAAAATGGAAACTTTCATCAATATGCTTATAATAGAAGAAATGGCAGTGGGTGGGTAAAGGTGTGGAGTGCCATTAATGACCCTTGCAGGGTGGATGCTGTTTGTGGAGTGAATGGCCTGTGTACTTCACCTGATAATGAAACAGTGCAGTGTGAGTGCATTCCAGGTTTTATCCCATTTGATACCACAAATGTGTTCTTAGGATGTCGTCCGGAAACTGTGATTAATTATTGTTCACAAGATCCTTCAAGGTTGGACTTCAAGCTGGAGGTTCTTAATGATACTGATTTTCAGTTTGGTTCCGAATCAGACTTTGCTGTGATGCAAATTACAGATTTAGAAACGTGTAAGAAATATGTCATGGATGATTGTTATGTCGTTGCTGCTACCTTCAATGCTACATCTTCAACATGTGTCAAGAAGAGGATGCCATTGGTGAATGCCAGAAAGAGTTCATCTTCTAAGGGGCAAAAAGCTCTACTTAAGGTTCCTTATAACAACAATAATGCATCTACTAGATTGGGAGGTTCAAAAAAGAAGAGTTTTAATGTCAGGGTTTTTCTCAAGGTCATGCTTGCTGTTAGTGCCACCCTTGCCTGCTTGTTTGGAGCCCTTGCTGTCTATTACCACCCTTTAGCTCGAAGATTGATGAGCACAAACAGGTTTCTGAGCGCAAATGCCATCGGAATCAACTTCAGAGAGTTCACATTCCAGGAGCTTCATGAAGCAACAAGTGGGTTCAGTAAGACTATTGGTAAAGGATCTTCAGGCAAAGTCTATAGTGGAAACCTTGCTATTGATGATGCAAGAATTGCTATTGCAGTGAAGAAGCTGGAGAAGAGAATTGAAAGAAGTGATCAGGAGTTTAGGACTGAGCTCAAGATAATTGGTCGCACTCATCACAAAAACCTACTGAGACTTCTTGGTTTTTGCATTGAGAAAAGCCATAGACTCCTTGTCTATGAGCTACTTCCAAATGGAGCACTGTCAAATTTTCTCTTTGGACAAAGAGAAAAACCTCAATGGAGTCAGAGGATTGATATAGCTCTTGGAATTGCAAGGGGGTTACTTTACTTGCATGAAGAGTGTGAGACTCAGATCATACATTGCGACATCAAGCCCCAAAATGTGTTGCTTGATTCCAATTATACAGCAAAGATTGCAGATTTTGGGCTTTCAAAGCTCCTCAACAAAGAGCAAACCAGAACAAACACCAACTTCAGGGGAACTATAGGGTACATAGCCCCTGAATGGCTGAGGAGTGCACCAATAACTTCTAAAGTTGATATCTTTAGCTTTGGGATTATGCTTCTTGAGATTATATGTTGCAAAAGGCATGTGGAACATAATCAAGAAAACGATGAAGACAGTGATGAAGATGGTACACTCCTTGCAGAATGGGTTTTGAGGTGTATAGTGTCAAAGAAACTAGAGCAATTAGCTGATCATGACTCGAAAGTACTAAGTGATATGAAGAGGTTTGAGCAAATGGCTTTGGTTGGGTTATGGTGCATCCATCCAGATCCAGCACTAAGGCCAACAATGAAGCAGGTGAATCAAATGCTAGAGGGAAACATAGTTGTTGGGGTTCCTCCATTGCTTTATGAGCAAATGACAGCTGATCAGAGCCTATAG 2388 0.4104 MASCITLPCFLTLLSFLGVSLAQDSSSTMNLNSNITAGSNHSLKSPSGDFEFGFYHLPGDYYLAGIWFANTIPNKTLVWYWNPPVEANSVIQLSSGGHLLLTYPNGTSVQIDSGNEINASSVSLKDSGNLVMEDSTSRVVWQSFDSPTNTMLPGQTLREDQALYSKGKGSLNYSNGNFRALMQEDGNLLLIAYLWSDPSYWYSDTANNNNVSLQFNDSAYLYLTTGSMNLRSLTNNPPTPTGDFYHRATIDENGNFHQYAYNRRNGSGWVKVWSAINDPCRVDAVCGVNGLCTSPDNETVQCECIPGFIPFDTTNVFLGCRPETVINYCSQDPSRLDFKLEVLNDTDFQFGSESDFAVMQITDLETCKKYVMDDCYVVAATFNATSSTCVKKRMPLVNARKSSSSKGQKALLKVPYNNNNASTRLGGSKKKSFNVRVFLKVMLAVSATLACLFGALAVYYHPLARRLMSTNRFLSANAIGINFREFTFQELHEATSGFSKTIGKGSSGKVYSGNLAIDDARIAIAVKKLEKRIERSDQEFRTELKIIGRTHHKNLLRLLGFCIEKSHRLLVYELLPNGALSNFLFGQREKPQWSQRIDIALGIARGLLYLHEECETQIIHCDIKPQNVLLDSNYTAKIADFGLSKLLNKEQTRTNTNFRGTIGYIAPEWLRSAPITSKVDIFSFGIMLLEIICCKRHVEHNQENDEDSDEDGTLLAEWVLRCIVSKKLEQLADHDSKVLSDMKRFEQMALVGLWCIHPDPALRPTMKQVNQMLEGNIVVGVPPLLYEQMTADQSL 795
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi09g2101 795 Gene3D - 147 286 - -
Mibi09g2101 795 PIRSF SRK 1 794 IPR024171 GO:0004674
Mibi09g2101 795 Gene3D Phosphorylase Kinase; domain 1 472 574 - -
Mibi09g2101 795 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 575 780 - -
Mibi09g2101 795 ProSitePatterns Protein kinases ATP-binding region signature. 502 528 IPR017441 GO:0005524
Mibi09g2101 795 Gene3D Transferase(Phosphotransferase) domain 1 575 778 - -
Mibi09g2101 795 SMART blect_4 34 147 IPR001480 -
Mibi09g2101 795 SUPERFAMILY alpha-D-mannose-specific plant lectins 76 206 IPR036426 -
Mibi09g2101 795 ProSiteProfiles Protein kinase domain profile. 496 785 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi09g2101 795 Pfam S-locus glycoprotein domain 244 310 IPR000858 GO:0048544
Mibi09g2101 795 ProSitePatterns Serine/Threonine protein kinases active-site signature. 618 630 IPR008271 GO:0004672|GO:0006468
Mibi09g2101 795 CDD STKc_IRAK 502 775 - -
Mibi09g2101 795 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 35 783 - -
Mibi09g2101 795 Pfam D-mannose binding lectin 76 161 IPR001480 -
Mibi09g2101 795 ProSiteProfiles Bulb-type lectin domain profile. 28 145 IPR001480 -
Mibi09g2101 795 SUPERFAMILY Protein kinase-like (PK-like) 476 774 IPR011009 -
Mibi09g2101 795 SMART serkin_6 496 773 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi09g2101 795 Pfam Protein kinase domain 499 771 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi09g2101 795 FunFam S-receptor-like serine/threonine-protein kinase 466 574 - -
Mibi09g2101 795 Gene3D - 20 145 IPR036426 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi09g2101 Mibi-ChrMibi09 40262516 40264903 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi09g2101 415 775 Receptor kinase-like Gene Family AT5G45780 36.339 5.26e-67 231
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Mibi09g2101 Pkinase 5.2e-52 CL0016