Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi09g2100 ATGATTTGTTTGGTCTTTAGTTTTCACACACTTCGTTGGTCACCCTCTCCATTCTCTCTTTCTTACCAAGATTCAATGGATGTTCATGTCCCCACTAAATTCCTCGCACTCTGTGTACATTTTTTCCTGCTTCTTCTTTGCTCTAAAGCTCAAACAAGTTCAAATCATTCTATCCAATTGGGTTCAAGCCTCGTTGCTGGCTCTAATACATCATGGAAATCACCTTCTGCTGACTTCGCCTTTGGGTTCTACCCTCTCCTCAATGGTGGCTACCTTGTCGGGATTTGGTTCGATAAGATTAATCCCCAGAAGACTCTAGTCTGGTCTGCAAATCGCAATGATCCTGCTCAGATTGGATCCTCCATTAATCTAACTCACAGTGGCCACTTAGTACTCCATCATGCCAATGGTTCATTAGTTTCAATCTACAATGGAACAAATAACGCTTCTTCTGCTTCAATGTTGGATAATGGAAACTTTGTATTGAAAAACTCGCTCTCAAACACCATTTGGGAAAGCTTTGATTCACCTACAGATACCATTCTGCCAGGCCAAAAATTGGGCATGGGTCAGATTATTTACTCCAATGCCGATGGATCACTAGATTGCTCAACTGGGAATTATAAGTTGGAGGTCCAATCTGATGGCAACATTGTGATCGCTGCTTTCAGGTATTCCAATCGTGCTTATTGGTACACTGGAACAATCAACAACAATGATGTTAGCCTTGTCTTCGACAATAATACAGCCACGCTTTATGCCCTCAATGGCACCCAACAAATATATGAAATGACACCCCAAAACCAATTGCCTAGTCCAATCGGAGATTACTACCATCGAGCAACCATCAACCATAATGGTAACTTTGAACAGTTGTTTTTCCGTAAGGAAAATGGAATGGATTGGATGCATGTATGGGGTGCTATAACAGAGCCATGTTTGGTTGATGCTATTTGTGGGGTGAATGGCTTTTGCACTTCCCCTAGCAAGGTTCTCAATTGTGAATGCTTGCCTGGGTATTCACCTTTGGATCCTCATGTTGCATCCAAAGGATGTTATCCTGATTTGGTGGTGAACTTTTGTTCTTTAAATTCATCTGCTCCGGACATTACTGTGCAGGACATTTCAGATTCTGATATACCAAACTATCATTTTGGTGATATGCAATGGATACCTAATTCCAGTTTGGAAAGTTGCAAGAGGGAAGTGATGAATGATTGTCTTTGCATGGCTGCTGTTTTGAATGGCACCGACTGTTTTAAGAAAAGGACACCTCTTTTGAATGGAAGAAGAGGTATCCCAACCACCCTTGGTTTGGTGGCGCTTGTTAAAGTTCCTGTGGTTCACAAAGATGATGGAAATGAATCTCCTTCTTGGGTGGTTCTGCTTGTCTCATTCTTGTCTTGTTCCCTGCTTGCTGTTGTTTTTGCAGCTTCTGCTATTTATCATAACCCAAAGTTTCGTCGTTGGATGTATAATGAGCCACCACCTAAGCCAAAGCCAGTGGACATCAACCTCAAGACATTTTCATTTCAAGAGCTAAGAGAGGCAACAAAGGGGTTTAAGAACAAACTTGGTCAAGGAGCATTTGGTACTGTGTACAGTGGGAATTTGATGTTGGAGGGAGAACAGGTTGAGGTTGCCGTGAAACAACTGGGAAAAACAGAGGATCAAGATGAGATTCGAGAGAATGAGTTTGTGACAGAAGTTCGAGTCATTGGTCTGACTCATCATAAGAATCTTGTCAGGTTATTAGGCTTCTGCAATGAACAAAACCATCGTCTTCTAGTTTATGAGCTGATGAAAAATGGGTCACTCTCAAATTTTATTTTTGGGGAAGGAAATAAAAAACCCAGATGGGAAGATAGAGCCAGGATCGTGCTTCAAGTTGCAAAAGGCTTGCTTTATCTGCATGAAGAGTGTGAGCCACAGATTATCCATTGTGACATAAAACCACATAATGTTCTTCTTGACTCTAATTACACGGCAAAAGTTTCAGACTTCGGCGTAGCAAAGCTGCTAAAGAAAGACAAAAGTCGAACAAGCACAAATGTAAGAGGGACAATGGGATATATGGCACCTGAATGGCTAAAAAATGCGCCTGTCACATCAAAGGTTGATGTGTATAGCTTTGGAGTGATGTTATTAGAGACCATATTTTGCAGAAGGCACATAGAGCTGCATCAAATTGGAGATGGAGAAGAGTGTGAAGACATGATACTAATAGATTGGGTTGTATATTTAGCAAAAGAAGGGATTTTGAGAGTGATGGTGGATCAAGTAGATGTTGAAGCTTCAAGTGATTTCAATAGGTTTGAGAGGATGACTATGGTTGGATTATGGTGTCTGTCTCCGAATCCAACGGTTCGACCATCTATGAAGAAGGTGACACAGATGTTGGAGGGAACCGTGGAGGTTGGCATTCCTCCTTTGATTGATGAACAAACATTTTAA 2454 0.414 MICLVFSFHTLRWSPSPFSLSYQDSMDVHVPTKFLALCVHFFLLLLCSKAQTSSNHSIQLGSSLVAGSNTSWKSPSADFAFGFYPLLNGGYLVGIWFDKINPQKTLVWSANRNDPAQIGSSINLTHSGHLVLHHANGSLVSIYNGTNNASSASMLDNGNFVLKNSLSNTIWESFDSPTDTILPGQKLGMGQIIYSNADGSLDCSTGNYKLEVQSDGNIVIAAFRYSNRAYWYTGTINNNDVSLVFDNNTATLYALNGTQQIYEMTPQNQLPSPIGDYYHRATINHNGNFEQLFFRKENGMDWMHVWGAITEPCLVDAICGVNGFCTSPSKVLNCECLPGYSPLDPHVASKGCYPDLVVNFCSLNSSAPDITVQDISDSDIPNYHFGDMQWIPNSSLESCKREVMNDCLCMAAVLNGTDCFKKRTPLLNGRRGIPTTLGLVALVKVPVVHKDDGNESPSWVVLLVSFLSCSLLAVVFAASAIYHNPKFRRWMYNEPPPKPKPVDINLKTFSFQELREATKGFKNKLGQGAFGTVYSGNLMLEGEQVEVAVKQLGKTEDQDEIRENEFVTEVRVIGLTHHKNLVRLLGFCNEQNHRLLVYELMKNGSLSNFIFGEGNKKPRWEDRARIVLQVAKGLLYLHEECEPQIIHCDIKPHNVLLDSNYTAKVSDFGVAKLLKKDKSRTSTNVRGTMGYMAPEWLKNAPVTSKVDVYSFGVMLLETIFCRRHIELHQIGDGEECEDMILIDWVVYLAKEGILRVMVDQVDVEASSDFNRFERMTMVGLWCLSPNPTVRPSMKKVTQMLEGTVEVGIPPLIDEQTF 817
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi09g2100 817 Gene3D Phosphorylase Kinase; domain 1 497 600 - -
Mibi09g2100 817 ProSitePatterns Serine/Threonine protein kinases active-site signature. 645 657 IPR008271 GO:0004672|GO:0006468
Mibi09g2100 817 SMART blect_4 63 177 IPR001480 -
Mibi09g2100 817 Pfam D-mannose binding lectin 105 190 IPR001480 -
Mibi09g2100 817 ProSitePatterns Protein kinases ATP-binding region signature. 525 550 IPR017441 GO:0005524
Mibi09g2100 817 Gene3D - 51 176 IPR036426 -
Mibi09g2100 817 SUPERFAMILY alpha-D-mannose-specific plant lectins 105 237 IPR036426 -
Mibi09g2100 817 ProSiteProfiles Protein kinase domain profile. 519 812 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi09g2100 817 Pfam S-locus glycoprotein domain 277 342 IPR000858 GO:0048544
Mibi09g2100 817 ProSiteProfiles Bulb-type lectin domain profile. 49 175 IPR001480 -
Mibi09g2100 817 CDD B_lectin 61 177 IPR001480 -
Mibi09g2100 817 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 66 810 - -
Mibi09g2100 817 SMART serkin_6 519 800 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi09g2100 817 Pfam Protein kinase domain 522 798 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi09g2100 817 FunFam S-receptor-like serine/threonine-protein kinase 491 600 - -
Mibi09g2100 817 Gene3D - 177 308 - -
Mibi09g2100 817 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase LECRK1 51 175 - -
Mibi09g2100 817 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 601 807 - -
Mibi09g2100 817 CDD STKc_IRAK 525 802 - -
Mibi09g2100 817 PIRSF SRK 28 816 IPR024171 GO:0004674
Mibi09g2100 817 SUPERFAMILY Protein kinase-like (PK-like) 500 801 IPR011009 -
Mibi09g2100 817 Gene3D Transferase(Phosphotransferase) domain 1 601 806 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi09g2100 Mibi-ChrMibi09 40258062 40260515 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi09g2100 471 802 Receptor kinase-like Gene Family AT4G33430 40.059 4.67e-66 231
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Mibi09g2100 Pkinase 8.9e-51 CL0016