Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi09g2096 ATGGCCGAAGCTTCATACACTGTGGCATCTGACAGTGAAACCATTGGGGAGGATAAGTCATCGGCTTTTCCTGAAATTGCTATTGGAATTGACATTGGTACATCCCAATGCAGTGTTGCTGTGTGGAACGGATCTGAAGTGAAGCTTTTGGAGAACACTAGAAACCAGAAAATCATGAGATCATATGTGACTTTTAAAGATGACACCCCTTCTGGAGGAGTTAGCAGTCGACTCTCTCATGAACATGACTTGTTATCTGGAGCGACAATCTTCAATATGAAACGCTTGATTGGAAGAGTTGATACAGACCCAGTTGTCCACTCTAATAAAAATCTCCCATTTCTGGTACAGACTTTGGATATTGGTGTACGCCCCTTCATTGCAGCATTAGTGAACAATATGTGGAGATCCACCACGCCTGAAGAAGTCCTGGCTATCTTTCTTGTGGAACTAAGAGTGATGGCAGAAGCGCAACTGAAACGGCCAATTAGAAATGTAGTCCTCACAGTTCCGGTTTCATTCAGTCGATTCCAGCTAACCCGGATAGAAAGAGCCTGTGCTATGGCTGGCCTTCATGTTCTCCGGCTGATGCCTGAACCAACCGCTGTGGCTTTATTATATGGACAACAAGAACAACGGAGTTCTCATGATAACATGGGCAGCGGAAGTGAGAAGATTGCTTTAATTTTTAACATGGGTGCTGGCTATTGTGATGTTGCTGTGACTGCTACAGCTGGAGGAGTATCACAGATAAAGGCCTTGGCAGGAAGTACCATTGGGGGAGAAGACTTGCTTCAGAATATGATGCAATATCTGTTACCAGAATCTCAAACTCTATTCAAGACCCACGGCATCAAAGAAATCAAATCCATGGCCTTGCTCCGAGTTGCAACTCAGGACGCCATTCATAGGCTCTCCTCTCAAACCAATGTGCAGGTTGACGTAGACTTGGGAGATGGTTTGAAGATAAACAAGGTTATAACCCGGAACGAGTTTGAGGAAGTGAACAAAAAGGTGTTTGAGAAGTGTGGAAGCCTCATCATCCAGTGTTTGCAAGATGCCAAGGTGGAGGTTGAAGATGTTAACGATGTGATAGTTGTTGGCGGATGCTCTTATATTCCAAAGGTAAAGAATCTTGTGGCTAGCTTGCTCAATGGAAAGGAACTTTACAGAGGTGTGAATCCTCTAGAAGCTGCAGTTCGTGGTGCAGCAGTTGAGGGAGCTGTGGCATCAGGTGTCAGCGATCCGTTTGGAAACTTAGACTTGCTGACCATCCAAGTGACACCATTAGCTATAGGGATCAGAGCTGATGGAAACAGCTTTGTCCCTGTGATACCAAGGAATACAACAATGCCAGCAAGGAAGGACTTGATTTTCACAACTTGCCATGATAATCAAACTGAGGCTTTGATTGTTGTGTATGAAGGTGAGGAAAAGAAGGCTGAAGAGAATCATTTGTTGGGATACTTCAAAATAGTAGGAATTCCAGAGGCACCCAAAGGAGTTCCGGAGATAAATGTATGCATGGACATTGATGCTGCAAATGTATTAAGAGTGTTAGTGGGTGTAGTAATGCCAGGATCCAGGCAGCCGGCGATTCCGGTCATGGAAGTAAGGATGCCGACTATTGATGATGGCCACGGCTGGTGCGTTGAGGCCTTAAATAAGAAGTGTGGCACTACTCAAGACTTGGTTACTGTCCCGAAGAAAGCGTAA 1716 0.4493 MAEASYTVASDSETIGEDKSSAFPEIAIGIDIGTSQCSVAVWNGSEVKLLENTRNQKIMRSYVTFKDDTPSGGVSSRLSHEHDLLSGATIFNMKRLIGRVDTDPVVHSNKNLPFLVQTLDIGVRPFIAALVNNMWRSTTPEEVLAIFLVELRVMAEAQLKRPIRNVVLTVPVSFSRFQLTRIERACAMAGLHVLRLMPEPTAVALLYGQQEQRSSHDNMGSGSEKIALIFNMGAGYCDVAVTATAGGVSQIKALAGSTIGGEDLLQNMMQYLLPESQTLFKTHGIKEIKSMALLRVATQDAIHRLSSQTNVQVDVDLGDGLKINKVITRNEFEEVNKKVFEKCGSLIIQCLQDAKVEVEDVNDVIVVGGCSYIPKVKNLVASLLNGKELYRGVNPLEAAVRGAAVEGAVASGVSDPFGNLDLLTIQVTPLAIGIRADGNSFVPVIPRNTTMPARKDLIFTTCHDNQTEALIVVYEGEEKKAEENHLLGYFKIVGIPEAPKGVPEINVCMDIDAANVLRVLVGVVMPGSRQPAIPVMEVRMPTIDDGHGWCVEALNKKCGTTQDLVTVPKKA 571
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi09g2096 571 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 418 532 IPR029047 -
Mibi09g2096 571 Gene3D - 212 390 - -
Mibi09g2096 571 FunFam Heat shock 70 kDa protein 8 261 342 - -
Mibi09g2096 571 Gene3D - 28 408 - -
Mibi09g2096 571 Gene3D - 91 146 - -
Mibi09g2096 571 SUPERFAMILY Actin-like ATPase domain 26 209 IPR043129 -
Mibi09g2096 571 PRINTS 70kDa heat shock protein signature 54 66 - -
Mibi09g2096 571 PRINTS 70kDa heat shock protein signature 502 518 - -
Mibi09g2096 571 PRINTS 70kDa heat shock protein signature 26 39 - -
Mibi09g2096 571 PRINTS 70kDa heat shock protein signature 393 413 - -
Mibi09g2096 571 PRINTS 70kDa heat shock protein signature 166 186 - -
Mibi09g2096 571 PRINTS 70kDa heat shock protein signature 421 440 - -
Mibi09g2096 571 PRINTS 70kDa heat shock protein signature 361 377 - -
Mibi09g2096 571 Pfam Hsp70 protein 27 519 IPR013126 GO:0005524|GO:0140662
Mibi09g2096 571 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 423 528 IPR029047 -
Mibi09g2096 571 FunFam Heat shock 70 kDa protein 8 91 146 - -
Mibi09g2096 571 PANTHER HEAT SHOCK PROTEIN 70KDA 27 520 IPR013126 GO:0005524|GO:0140662
Mibi09g2096 571 SUPERFAMILY Actin-like ATPase domain 224 411 IPR043129 -
Mibi09g2096 571 FunFam Heat shock 70 kDa protein 8 416 531 - -
Mibi09g2096 571 Gene3D Actin; Chain A, domain 4 261 342 - -
Mibi09g2096 571 CDD HSP70_NBD 28 408 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi09g2096 Mibi-ChrMibi09 40218811 40220526 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi09g2096 27 519 Calmodulin-binding Proteins AT3G12580 39.165 3.44e-108 336