Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi09g2092 ATGGATGGTTCTGCAAGTTTTGAGGTAGAGGACCCTGAATTCGTGGAAGTTGATCCCACTGGAAGATATGGAAGATACAACGAAATTCTTGGCAAAGGGGCTTCAAAGACAGTTTACAGAGCATTCGATGAGTATGAAGGGATAGAAGTAGCATGGAATCAAGTGAAGCTCTACGATTTTCTGCAGAATCCTGAAGATCTTGAGAGGTTATACTGTGAAATTCATCTTCTCAAGACATTAAAACACAAAAACATCATGAAGTTCTATACTTCCTGGGTTGATACTGCTAATAGGCATATCAACTTCGTCACCGAGATGTTCACTTCTGGCACTCTCAGACAGTACAGGTTAAAACACAAAAGAGTAAACATTAGAGCTGTGAAGCATTGGTGCAGGCAGATTTTGGAAGGGCTCCTTTATCTTCACAGTCATGATCCTCCTGTGATCCACAGAGACCTCAAATGTGACAACATTTTCATCAACGGCAATCAAGGGGAAGTTAAAATTGGCGATCTTGGCCTCGCTGCAATTCTCCGCAAATCTAACGCTGCTCGTTGTGTTGGCACACCAGAGTTCATGGCTCCGGAAGTGTATGAAGAAGATTATAATGAATTAGTAGATATATACTCTTTTGGAATGTGCATCTTGGAAATGGTGACATTTGAATATCCTTACAGTGAATGCACCCATCCTGCTCAAATCTACAAGAAAGTTGTCTCTGGAAAGAAACCAGAGTCTCTCTACAAAGTAAAGGATCCTGAGGTTAGACAATTTGTGGAGAAATGCTTAGCAACCGTGTCCCTTAGGCTTTCTGCAAAAGAACTTCTGAAAGACCCTTTTCTCCAAATTGATGATTACGGATCCGACATGAGATCACCTCGGTATCAAGGAGATTGTTATGAAGTAACCCCTTTATATAGACAACCTCTTAATGGAGTTCACAGCAGTAACAACTCAATCAATTACACTGATTATCTCAGTGGTTATGGACCAGAATCTGAGCTAACAAGCGAAATCGATCTCTTTGAATGTGAAGAGGATGATAATTTAGCTGAAGTTGATACTGCAATCAAAGGCAGGAGAAGAGAAGATGATGGAATTTTTCTCAGACTTAGAATAGCAGATAAGGAAGGTCGAGTCCGAAATATCTACTTCCCATTTGACATAGAAACTGATACAGCATTGAGTGTAGCAATTGAAATGGTGGCTGAGCTGGACATAACTGACCAAGATGTAACAAAAATAGCGGACATGATAGATAATGAAATATCAAACTTGGTCCCAGAGTGGAGAGCTGGACCCAGAACAGAGGAAAATCCAGAATGCACAAGTGAAAGTCTTTGCTTCAATTGTGCTTCCCGGGGCAACTTCTTTGATTATGTATCATCAAACAGCCCATCAGCTAAGAAGCTACAATTTCTTCATTGTTCCAGAGATGGCTGTGCAGCCATTCACGGCCGTTTTGAGGAGATCACGTACCAAGTTGAGGGATCTGAAAATTGTACTACAGATGGTCCTCCAGCTGCTTCAAGCCAATCTACTGGTATTCACTTTACTGATATCTGGGCTCAGAGAGATGATCATGAACCAAGTTCAGAGGAGTTAAGAGACATACATAGTGAAAAATCACATGAGGCATCAAATCAATCAAAACTTGAGGAGGATGGGAGAAGAATCGTAGGGGATGATGAAAGTAATCCCCACTCAAAAGACACATTTTATAATCAAGAATTAGAATGTGTTTTCCTGGACTATGAGAATGAAATAAGGCAAGAACTAAGATGGCTCAAAGCAAAGTACCAAATGCAGTTAAGGGAGCTTAGAGACCAGCAATTAGTTGGAACACCAAAACTCGCAAACACATATCCTGATCCTGAAGAATCAGAAGAAAATGGGAAATATGGTGGGGTCCCCAAGCTTTCAGTTACAACTCAATTGAAGTTAAGGAGTAATATACAATTGTTTAGGCTTTTAAGCAGCAGGAGGCGATTTTTGGCTGATGCAGAGAAGAATAAGAAGCTCTCGGCTATGGTTAATATGGTGCAAGATGTTGATGAGACTAGTGGACCTAATAGTCCTGAGCAGATGGTCACAGCCAATGATTTCTATTTGCTTCCACACTCGCTTCATAGAGCAACATCTCTTCCAGTTGATGCAATAGATGCATAA 2169 0.408 MDGSASFEVEDPEFVEVDPTGRYGRYNEILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQNPEDLERLYCEIHLLKTLKHKNIMKFYTSWVDTANRHINFVTEMFTSGTLRQYRLKHKRVNIRAVKHWCRQILEGLLYLHSHDPPVIHRDLKCDNIFINGNQGEVKIGDLGLAAILRKSNAARCVGTPEFMAPEVYEEDYNELVDIYSFGMCILEMVTFEYPYSECTHPAQIYKKVVSGKKPESLYKVKDPEVRQFVEKCLATVSLRLSAKELLKDPFLQIDDYGSDMRSPRYQGDCYEVTPLYRQPLNGVHSSNNSINYTDYLSGYGPESELTSEIDLFECEEDDNLAEVDTAIKGRRREDDGIFLRLRIADKEGRVRNIYFPFDIETDTALSVAIEMVAELDITDQDVTKIADMIDNEISNLVPEWRAGPRTEENPECTSESLCFNCASRGNFFDYVSSNSPSAKKLQFLHCSRDGCAAIHGRFEEITYQVEGSENCTTDGPPAASSQSTGIHFTDIWAQRDDHEPSSEELRDIHSEKSHEASNQSKLEEDGRRIVGDDESNPHSKDTFYNQELECVFLDYENEIRQELRWLKAKYQMQLRELRDQQLVGTPKLANTYPDPEESEENGKYGGVPKLSVTTQLKLRSNIQLFRLLSSRRRFLADAEKNKKLSAMVNMVQDVDETSGPNSPEQMVTANDFYLLPHSLHRATSLPVDAIDA 722
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi09g2092 722 Gene3D Phosphorylase Kinase; domain 1 8 105 - -
Mibi09g2092 722 CDD STKc_WNK 22 281 - -
Mibi09g2092 722 MobiDBLite consensus disorder prediction 526 570 - -
Mibi09g2092 722 MobiDBLite consensus disorder prediction 526 571 - -
Mibi09g2092 722 ProSitePatterns Serine/Threonine protein kinases active-site signature. 148 160 IPR008271 GO:0004672|GO:0006468
Mibi09g2092 722 FunFam Probable serine/threonine-protein kinase WNK1 9 105 - -
Mibi09g2092 722 Pfam Protein kinase domain 27 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi09g2092 722 FunFam probable serine/threonine-protein kinase WNK9 365 449 - -
Mibi09g2092 722 SMART serkin_6 24 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi09g2092 722 MobiDBLite consensus disorder prediction 616 636 - -
Mibi09g2092 722 Gene3D - 366 446 - -
Mibi09g2092 722 Pfam Oxidative-stress-responsive kinase 1 C-terminal domain 368 423 IPR024678 GO:0004674|GO:0005524
Mibi09g2092 722 FunFam probable serine/threonine-protein kinase WNK9 107 286 - -
Mibi09g2092 722 Coils Coil 590 610 - -
Mibi09g2092 722 Gene3D Transferase(Phosphotransferase) domain 1 107 286 - -
Mibi09g2092 722 SUPERFAMILY Protein kinase-like (PK-like) 27 282 IPR011009 -
Mibi09g2092 722 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 10 615 - -
Mibi09g2092 722 ProSiteProfiles Protein kinase domain profile. 24 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi09g2092 Mibi-ChrMibi09 40166233 40169212 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi09g2092 1 491 MAP Kinase Kinase Kinase AT3G22420 60.491 0.0 616
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Mibi09g2092 Pkinase 1e-49 CL0016