Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi09g2066 ATGAGTACTTCAGATGAAGAACGCTCTGTTATAGGAAGCAAGGCGGAGATAGGGTTTCTAGATTTTGAGGAAGAGAAATCTGTCTATAGTTATGCTCCAAACGAAGAGGACCCTGTTGTCATATCTGTCCCATTTCCATTGGTGAATGAGAAACCGCAATCAGTATGTGTCGGCCAAACTGTTGTTGATGTAATAACGATCAAGAATACCACCAATGAACCAGTGGAATTGTGGAGTGTTCATATTTATGCTTCAAGTCCTCAGGACTGTTTCACACTTTCTCTGATGGAACCTCCGTCAGCAAATACAAATGTAGATAGCATTCGAGGTTTTCTAGAGTCTTTCTCTTTGGAGGACAGGATGCTTCAACCTAATGAGACTTTGAAAGTATGGTTATCTTGCAAAACAAAGGAATTGGGATTGCACTCCTCAATTGTGTATGTTGACGCAGGGGATGAAAGAATAGAAAGGACAGTTTTTCTCTTAGCTGAAGACAAAATCTCCCAGTCTTTGGCTTCCAAAAAGCCTTATTCAAAAGGAAGGAAGAAAGAAAAATTTATTGTAAATACTTTTGTTGCTGGCTCACGTCCTCAGAGGAAGGGCAATCGTGCATACAAGAACAGGCTTCCAACATATGACATTCCCAAGGAAACAAGAGACATGCTAGAGAGCAATCAGATCCCTGATGCTATTGAAAGAGGTCTCACCAGGAGGAATTATGCTTCTTATTTCAAAACATTAGTTATGATGGAAGAGCTACAATTGGAGGAAGACATGCGGACCTATGATATGGAATGCGTAACTTTGAGGAAAAAGGGAAATCAATTCTTGTCCTTGGAGGTTCCAGGGCTAGCTGAGAGGAGGCCATCACTGGTTCATGGGGACTATATTTTTGCCAAGTTAGCCTCGGAACATGATCGTGATAACACGCCTGCTTACCAGGGTTTTGTCCACCGTGTTGAGGCTGACGAAGTACATTTGAAGTTTGATCCTCAATTTCATTCTATCCACAGAGAGGATGATCCCTACAATGTTCATTTCGCTTATAATAGGCTCAATATGAGACGGTTATATCAGGCAATTGGGGCTGCAGAAAACCTAGGAAATGAATTCCTTTTCCCCCATGAGACATCCAGAAGGAGGTGCATCGAAACCCCTCATTTGGTGCCTATTTCTGGTAATATTAATGAGGAGCAGATGCTTGCTATCAAGAAGATTCTTGGATGCAGAGGTGCACCTCCTTATCTGATTCATGGTCCTCCAGGTACAGGAAAGACTAGCACAGTAGTTGAAGCAGTCCTCCAACTCTACAACAATCATAAGAAAGCTCGCGTTCTCATCTGTGCACCCTCAAATAGTGCCGCAGACTACCTACTTGAGAAACTCCTGGGTCAAAAGGCTGTCAGTTTTCGAGATGGAGAAATATTCAGGCTTAATGCATCTACAAGGCCATATGAGGAAATCAAACCTGAGCTTATGCGCTTCTGCTACTTTGATGAGTGTGTGTTCAAATGTCCTCCAGTCAGTGCTCTCCTGAAGTTTAAGATCATAGTATCAACTTATATGAGTGCTTGTCTTCTTTATGCTGAAGATGTCATTCGAGGTCACTTTTCACACATTTTCTTGGATGAGGCTGGCCAGGCTTCAGAACCTGAAACCATGATCCCTATATCTCATCTCTGCAAAAGGGAGACTGTTGTCATTCTTGCGGGAGACCCCATGCAGTTGGGTCCAGTAATATACTCCAAGGAATCAGACGGCAATGGATTGGGGAAATCATACTTGGAAAGATTGTTTGAATGTGAATTATATTCCTATGGAGATAATAACTATTTAACCAGATTGATTAGAAACTATCGGTGTCACCCACAAATATTACATCTCCCTTCCAAGCTGTTTTATGAGGGAGAATTGATTGCATGTAAGGATGATACTAGTTCTTTGTTGCTGAATGAAGACTTCCTCCCGAATAAGGAGTTCCCTGTTCACTTTTTTGGCATCCAAGGATGTGATGAAAGAGAAGGGAGTAATCCATCATGGTTCAACCGAGTTGAAGTGAGTAAGGTCATAGAACTAGTCAAGAAGCTTACATCCGGTGGAAAGATGAAGGAGGAGGACATTGGGATTATAACACCATACAGGCAACAAGTACTTAAAATAAAGCAGACACTTGAAAGTATAGATTTGCCAGAGATTAAAGTTGGAAGTGTTGAGCAGTTTCAGGGACAGGAAAGACGAGTTATTATAATATCAACTGTTCGCTCAACAATCAAACATAATGACTTTGACAGAGTACACTGCTTAGGATTTCTGAGCAATCATCGAAGATTCAATGTTGCTATAACACGTGCCATATCACTGCTGATTATTATTGGGAACCCTCATATAATCTCTCGGGACTACTATTGGCACAAACTCTTGTGGCATTGTGTGGACAATTCATCTTATCTTGGTTGTTCTCTTCCTGAAAGACTGGAAGTTGAAGAGGACTCTGGCTTGGGGAATTTTGAAGAAAGCTCATTCCCCCCTGAAGATGTGGCACGGGGTCAAGAAGATTCACCACAATCTGATTCTGAGTTGCCTAAACCAGCTGGTACTGATGAGGCTGAATGGTCTGATGGTTGGAAGTAG 2631 0.4189 MSTSDEERSVIGSKAEIGFLDFEEEKSVYSYAPNEEDPVVISVPFPLVNEKPQSVCVGQTVVDVITIKNTTNEPVELWSVHIYASSPQDCFTLSLMEPPSANTNVDSIRGFLESFSLEDRMLQPNETLKVWLSCKTKELGLHSSIVYVDAGDERIERTVFLLAEDKISQSLASKKPYSKGRKKEKFIVNTFVAGSRPQRKGNRAYKNRLPTYDIPKETRDMLESNQIPDAIERGLTRRNYASYFKTLVMMEELQLEEDMRTYDMECVTLRKKGNQFLSLEVPGLAERRPSLVHGDYIFAKLASEHDRDNTPAYQGFVHRVEADEVHLKFDPQFHSIHREDDPYNVHFAYNRLNMRRLYQAIGAAENLGNEFLFPHETSRRRCIETPHLVPISGNINEEQMLAIKKILGCRGAPPYLIHGPPGTGKTSTVVEAVLQLYNNHKKARVLICAPSNSAADYLLEKLLGQKAVSFRDGEIFRLNASTRPYEEIKPELMRFCYFDECVFKCPPVSALLKFKIIVSTYMSACLLYAEDVIRGHFSHIFLDEAGQASEPETMIPISHLCKRETVVILAGDPMQLGPVIYSKESDGNGLGKSYLERLFECELYSYGDNNYLTRLIRNYRCHPQILHLPSKLFYEGELIACKDDTSSLLLNEDFLPNKEFPVHFFGIQGCDEREGSNPSWFNRVEVSKVIELVKKLTSGGKMKEEDIGIITPYRQQVLKIKQTLESIDLPEIKVGSVEQFQGQERRVIIISTVRSTIKHNDFDRVHCLGFLSNHRRFNVAITRAISLLIIIGNPHIISRDYYWHKLLWHCVDNSSYLGCSLPERLEVEEDSGLGNFEESSFPPEDVARGQEDSPQSDSELPKPAGTDEAEWSDGWK 876
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi09g2066 876 CDD SF1_C_Upf1 621 810 IPR041679 -
Mibi09g2066 876 FunFam Probable RNA helicase SDE3 620 819 - -
Mibi09g2066 876 Pfam AAA domain 511 583 IPR041677 GO:0004386
Mibi09g2066 876 Pfam AAA domain 395 481 IPR041677 GO:0004386
Mibi09g2066 876 Gene3D - 321 606 IPR027417 -
Mibi09g2066 876 Pfam AAA domain 591 794 IPR041679 -
Mibi09g2066 876 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 394 806 IPR027417 -
Mibi09g2066 876 FunFam Probable RNA helicase SDE3 344 489 - -
Mibi09g2066 876 Gene3D - 620 823 IPR027417 -
Mibi09g2066 876 PANTHER CANCER/TESTIS ANTIGEN 55 118 378 - -
Mibi09g2066 876 MobiDBLite consensus disorder prediction 830 876 - -
Mibi09g2066 876 CDD DEXXQc_Helz-like 396 620 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi09g2066 Mibi-ChrMibi09 39998592 40002428 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi09g2066 394 551 Core DNA Replication Machinery Family AT1G08840 32.099 1.39e-08 57.0