Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi09g2037 ATGGATGGATTTGACGAGTCTGGAGATTTATGTTAAGAAAATATGGAAGATATGGAGATTGATCACATCGTGGATATTCCTGACACTCCTGATAGACTAATTACTAGGCATGTTGGTCGAAAATATGCTGGTAATCCCAATGTTTGTGTCAATGAGAAGGGAGAGAGGGTTCCCCCTGTTGCTGAAAGCAGTAAGAATGGAGGGTTGGCCTTTTGTCTTTCAAAAAGTTCAAACAGAGGTGAAATGAATAACTGCATAGCTGCATCCTCATCAAATAACTCTTATGCTTCTCAAAATGCTCCCATATTTAGGAGGTTCCAAACCGAAAAATCTCTTAGTAAAGAGTTTGCATACACAGCTGGATCTGAAAAGACAGAGAAAGGGGAAAATGTATGCCCTGAATTTCCTTCTAAATCATCTTCCAGTGGCAGTGAGGGTGTTACTTTTTTTGATTTGACTAAAGAAAATGGACAGGCCCAAAAAGTCAGACCATTTTTCTCACATCATGGGTTGAAGGATAATGCAATTGAAACCAAGAAAGATGGGAAAGCAAGCATTGGGGACTCTCCTATATCTTGCATCCCTGATTCTTCAAATACGTCTAGCAATGCCTTACGAGGAAAGTGTAAAATAGATGATGAAGCACGTCTATGCTCAAATATAACTGTTGATCGTGGAAAGAGTATTGATCTATCTAATGATTCTCAACAAAAAACTGAAAAGCAGGTGTCTTTGTCTCCTCGCTTTATGGCTGCCCCAAGATTCAGAGGGCAGAAGAGATTGGTGCGAAATGGTTGTATCTCTCCTTATAATATTGCAGCTAGAGCAAAACGATCAGCTGAACAGAATGATGTTGAACAGAGTCATGCTATAGCTGATGTTTCGAGCAATACATCTCATATGAGTATCAATGATATAGTTGCTGAAGAGAGAAGCAGTTACAGAGTGAAGGGAAAAGAATTGTTTATCCATCCTTCAAGTGTGCATGATGCCAGAACTATCAAAACAGCTGGCAGCTCTATGGATAATCATGAAGAGACCAACGGTACCAGTAATGCTATAAGAAATTCACATGAATGCTTTGGGGAATCAGATGGTTTGAGAACAACACGGAACCACAGAACTACTAATTGGCCCTTGCATGTTGTAACTGGGCATCGTTCAAGGAGAGGCGAAGATTCTGAAAGATTTATCAGCAGACAAAGTAGGAACAGAGTGGGTAGAAGAGACACTGGGAGCAGTCAAAACACTATGGATGTAAGATATCCCCCAGAAAATCAGGCAAAATCTCTGATCATTCCTGATACTGAACAGTCGACTAGACCTTGTAATACAGCAGACAAACTGACTAAAAGGCAGAGGAAAAATGCATCAACTTCTAGAAATCTTAATCCAGAGATTATGATTCTTGATTCACCAGGGGAATCATCAAATTTAAGCTCATCTAGAACCTCTGAAGTTATTGAGACAGTACATGGAACAACATTCTCCAACAGAGCATCCCATGATTCTGATGACATGAATCCTAGTGACTCAGATTATCGGGCTAGACAGGTAGAAGCGGACGAGATGTTGGCCCGTGAACTTCAAGAACAACTGTATCATGAGGATTCTTTTGACGGGGGAGAGCATATTGATGAGCATTTAGCGTGGGCATTGCAACATGAGGAGGAATTTCTGCATACATCGACTGAGAGTCACCATATATCACCCCCTAGATGGTTGTCAAGGGCAGCCTCAAATAGACAGCCTCGTTCCCAGTCTCATCAAAATTCTACAAATAGAAGGAGAGCCGTGCCTCATGCCCCTCCTAACAGAGTGTCACAGCTGAGGAGTCGCTTTTTAAATCGGTCTTCAGTACCTGCCATCCCAACCAGAGGGAGGCGTCTTCGGTTTCCTGTGGATATGGACTTTGATGTGAGACTTGATATATTGGAAGCATTGGAGGCTGCAGTGGGGGATATTGGTGACATGGAATTTGCTGAAGATATGTTTCAAGCTCATCAAGACTTCAATGAAAATGATTATGAAATGCTATTGGCCCTTGATGAGAACAATCATCAACATGCTGGTGCATCTGTCCATCAGATCAATAATTTGCCGCAGTCCACTATACAGACTGACAACTTCCAAGAGGCCTGCGCCATATGTCTTGAAATTCCAGTTATGGGAGAAACCATTCGCCATCTTCCTTGTTTGCACAAATTTCACAAAGATTGTATTGATCCTTGGCTTCGTAGAAGGACCTCTTGCCCAGTGTGCAAGTCATCTATCACCTAA 2280 0.4175 MDGFDESGDLCXENMEDMEIDHIVDIPDTPDRLITRHVGRKYAGNPNVCVNEKGERVPPVAESSKNGGLAFCLSKSSNRGEMNNCIAASSSNNSYASQNAPIFRRFQTEKSLSKEFAYTAGSEKTEKGENVCPEFPSKSSSSGSEGVTFFDLTKENGQAQKVRPFFSHHGLKDNAIETKKDGKASIGDSPISCIPDSSNTSSNALRGKCKIDDEARLCSNITVDRGKSIDLSNDSQQKTEKQVSLSPRFMAAPRFRGQKRLVRNGCISPYNIAARAKRSAEQNDVEQSHAIADVSSNTSHMSINDIVAEERSSYRVKGKELFIHPSSVHDARTIKTAGSSMDNHEETNGTSNAIRNSHECFGESDGLRTTRNHRTTNWPLHVVTGHRSRRGEDSERFISRQSRNRVGRRDTGSSQNTMDVRYPPENQAKSLIIPDTEQSTRPCNTADKLTKRQRKNASTSRNLNPEIMILDSPGESSNLSSSRTSEVIETVHGTTFSNRASHDSDDMNPSDSDYRARQVEADEMLARELQEQLYHEDSFDGGEHIDEHLAWALQHEEEFLHTSTESHHISPPRWLSRAASNRQPRSQSHQNSTNRRRAVPHAPPNRVSQLRSRFLNRSSVPAIPTRGRRLRFPVDMDFDVRLDILEALEAAVGDIGDMEFAEDMFQAHQDFNENDYEMLLALDENNHQHAGASVHQINNLPQSTIQTDNFQEACAICLEIPVMGETIRHLPCLHKFHKDCIDPWLRRRTSCPVCKSSIT 759
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi09g2037 759 MobiDBLite consensus disorder prediction 408 423 - -
Mibi09g2037 759 Pfam Ring finger domain 713 755 IPR001841 -
Mibi09g2037 759 MobiDBLite consensus disorder prediction 562 607 - -
Mibi09g2037 759 PANTHER SI:CH211-59O9.10 394 759 - -
Mibi09g2037 759 MobiDBLite consensus disorder prediction 339 358 - -
Mibi09g2037 759 MobiDBLite consensus disorder prediction 384 480 - -
Mibi09g2037 759 CDD mRING-H2-C3H2C2D_ZSWM2 714 755 - -
Mibi09g2037 759 FunFam RING/U-box superfamily protein 679 759 - -
Mibi09g2037 759 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 680 759 IPR013083 -
Mibi09g2037 759 MobiDBLite consensus disorder prediction 565 598 - -
Mibi09g2037 759 MobiDBLite consensus disorder prediction 339 372 - -
Mibi09g2037 759 SUPERFAMILY RING/U-box 713 758 - -
Mibi09g2037 759 ProSiteProfiles Zinc finger RING-type profile. 714 755 IPR001841 -
Mibi09g2037 759 MobiDBLite consensus disorder prediction 385 407 - -
Mibi09g2037 759 MobiDBLite consensus disorder prediction 456 480 - -
Mibi09g2037 759 SMART ring_2 714 754 IPR001841 -
Mibi09g2037 759 MobiDBLite consensus disorder prediction 431 446 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi09g2037 Mibi-ChrMibi09 39675205 39680771 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi09g2037 669 755 C3H Transcription Factor Family AT3G55530 35.294 1.67e-16 78.6