Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi09g2026 ATGAGGCAGATCTTTTTGTTTTTCTTCTCTGTCGTCACCTTTTTCTTATGCACTCTTACTTTCTCTTACAACCATGAAGCTTACCTGCTTTATTCATGGCTTCACAGCTCACCCTCACCACCTTCTTCACATTTCTCCAACTGGAACATTCGTGACACAAACCCATGCAATTGGACCTCCATAACTTGTTCTCCTCAAGGTTATGTCGCAGAAATTAATGTTATTTCTGTCCCTCTTGGCTTGCCTCTACCTTACAATCTCTCTTCCTTTCGCTTCCTTAGAGAACTTGTCATCTCAGATGCAAATCTCACTGGAAATATCAGTTCTGATATTGGTTTTTGTTCTGCTCTTACTGTCATTGATCTTAGCCATAATAGTCTCACTGGTTCTATTCCTGCAAGTATTGGGAATTTACCAAATCTTAAGACTTTGGCCTTAAACTCCAACTTCCTCAGTGGAGAAATCCCAAATGAGCTAAGTAATTGCATTGGCCTAGAATCTGTCATCCTCTCAAAAAATCAGCTAGGTGGGAATATCCCACCTCTGCTGGGAAAATTATCAAAACTTGAGGTTTTTAGAGCAGGGTGGAACAAACTCATTACTGGGACTATACCAAATGAGCTGGGAAATTGCATTAATTTGGTTTCTTTGGGGTTGACTGGAACCAGCATATCAGGCTCTTTGCCTGCTTCATTGGGTAGGCTTAAAAAGCTTCAAAGGCTGTCCCTTTGTGAGACTATGCTTTCTGGTGAGATTCCATCGGAGATAGGTGATTGCTCTGAGCTTGGTGAGTTGAGGCTATGCAGAAACAAACTATCAGGTTCTATTCCATCTGATATAGGGAAGCTTCAAAATCTGCAGATTTTGAATTTATGGGATAATTTTATTGTTGGGGCTATCCCTGAAGAGATTGGTAACTGTACAAGCTTGAGGACACTTGAGCTTTCTATGAATTCTCTATCTGGGACTATCCCTTCTTCTGTAGGTAATCTTATGAAGCTTGAAAAGTTCTTGGTTGCTCAAAACAATATCTCTGGTTTTATACCTCCAACTCTTTCAAATGCCATAAATCTGCAAAGATTGGAACTTTACCTGAATCAAATCTCAGGATTGATCCCACCAGAGCTTGGGAGGCTGCAAAAACTCACTCAGTTCTATGCTTGGGGCAACCATCTTGAAGGAACCATCCCTTCTACTGTAGCCAACCTCAGTAACCTTCAGAAGCTAGATTTGTCTTGGAATCCATTTGTTGGAAGCATCCCAAAAGGCCTCTTTTTGCTGCAAAACCTCACAGAGTTTGAGTTAATTTTCACTGATATATCAGGTGCAATTCCACCTGAGATAGGACGTTGCAGCTCTCTTGAAAGGCTGAGTCTAAGAAACAATAGAATTCATGGTGAGATTCCAAAGACAATTGGTGGTTTGAAGAACTTGATTTTCTGTGATATCTCTGATAACCTCCTTTACGGGTCATTGCCGGAGGAGATTGGTGGTTGCTCAAGGCTGGAAATGATAAACCTTAGCAACAATGACTTAGAAGGTCCACTGCCTGAGTCATTATCAACACTGCCCAATCTTTCAGTTTTGAACGCTTCTAACAATAAATTTGATGGTCAAATACCTTCGAGTTTATGTCATGATCTTTCTTCCCTAATTGATCTCCTACTTAGCAGAAACAGCTTCTCTGGAACCATTCCTCCATCACTTGGTCTCTGTTCAAAACTCCAAATGCTTGATCTTAGTAGCAATGAACTCACTGGAAACATACCACAAGAGTTAGGTGATATCAAATCTCTTGCACTTGTCCTTAACCTTAGTCACAACTCTCTTAAAGGGTCAATGCCTTCTGAAATATCTAAACTAAACATGCTCTCAGCTATGGACATTTCACATAATATGTTGGAAGGGGATTTGCACCCTCTTTCTCACCTTGCAAGTCTTGTCTCTCTCAATATCTCTTACAATAACTTCACTGGCTATCTTCCTGACACTAAGATTTTCAGACACTTGTCACCAGAAGAGATTGTGGGAAATAGTGGACTCTGTTCTAAGATTCAGGATTCATGCTTCTTAAATGATTATTCACGAAAACAATTGACTGAAACAATAAGCTCAAGAACTCTTAAACTGGTCATTGGGTTGCTGGTAGTGTTGACACTGATATTTGTTGTTGTAATAATCATTTCAGTTACCAGGTCAAGAACTGTCAGAGGCAAGAATAATCATCATTCAGAGATGGGAAACACATGGACATGGCAATTCACTCCATTTCAGAGGCTAAATTTCGCAGTTGAGCATGTTCTTAGAAGCTTAAGTGAAGAAAATATAATAGGAAAAGGATGCTCAGGAGTTGTTCATCGTGTGGATATTGGTAATGATGAAGCCATAGCTGTGAAGAAATTGTGGCCAACTACAATAGTTTCAAGTGATATTGGAGCAGCCAATGATGATGAAAAGAGAGGAGCTCGAAACTCTTTCTCGAGAGAGCTGAAAATCCTCGGCTTGATCCGACATAGGAACATAGTGAAACTCCTAGGATATTGTTGGAGTGACACCATGAGGTTGCTTATGTATGAGTACATGCCAAATGGGAGCTTAAGCAGTCTACTTCATGAGAGGGATGATGATGAGAATTCTTGTTTAGAATGGGAAGTTAGGTACAAAATCTTGTTAGGTGCTGCACAAGGACTTGAATATCTTCACCATGATAATAACCCTCCAATAGTTCACAGAGATATCAAATCCAGTAACATCCTCATTGGCCCTGAATTTGATGCTTGCATTGCTGACTTTGGATTGGCTAAGTTTGTTGATGATTGTGGTTTTGGCAAATCCTCCAATATCGTCGCCGGTTCTTGGGGATATATCGCTCCTGAGTATGGCTACATGATGAAGATCACAGAAAAAAGCGATGTTTATAGTTTCGGTGTGGTAATGCTGGAAGTGCTGACAGGTAAGAAACCTATTAATGATCCAAGCATACCAGAAGGGTCACACATTTCTGAATGGGTGAGAGAAAAGGGGGAACAAATAGTACAAGTCTTAGACTCTACCTTATTACAAGCTTCCCAAGAGTTAGAAATAGGAGAAATGAAGGAAGCATTAGGAATTGCCCTATTGTGCTTAACTTCTGCTCCAAACCAAAGACCTTCAATGAGGAATGTGGCAACCATGATCAAGGAAATTAAACAAGTTAGTGAGGAAGAATATGCAGATTTTCATACCCTTTTGAAGGAAGACTCTCCTACACCTCTTACTGGGCCTTCAAATGCAACACCAAGCTGCTTGTACCCTAAAAGCCCATCTTCATCATCACCTAGACGATCATCTTTTTCCATTGTGGAATTGGGCTAG 3354 0.404 MRQIFLFFFSVVTFFLCTLTFSYNHEAYLLYSWLHSSPSPPSSHFSNWNIRDTNPCNWTSITCSPQGYVAEINVISVPLGLPLPYNLSSFRFLRELVISDANLTGNISSDIGFCSALTVIDLSHNSLTGSIPASIGNLPNLKTLALNSNFLSGEIPNELSNCIGLESVILSKNQLGGNIPPLLGKLSKLEVFRAGWNKLITGTIPNELGNCINLVSLGLTGTSISGSLPASLGRLKKLQRLSLCETMLSGEIPSEIGDCSELGELRLCRNKLSGSIPSDIGKLQNLQILNLWDNFIVGAIPEEIGNCTSLRTLELSMNSLSGTIPSSVGNLMKLEKFLVAQNNISGFIPPTLSNAINLQRLELYLNQISGLIPPELGRLQKLTQFYAWGNHLEGTIPSTVANLSNLQKLDLSWNPFVGSIPKGLFLLQNLTEFELIFTDISGAIPPEIGRCSSLERLSLRNNRIHGEIPKTIGGLKNLIFCDISDNLLYGSLPEEIGGCSRLEMINLSNNDLEGPLPESLSTLPNLSVLNASNNKFDGQIPSSLCHDLSSLIDLLLSRNSFSGTIPPSLGLCSKLQMLDLSSNELTGNIPQELGDIKSLALVLNLSHNSLKGSMPSEISKLNMLSAMDISHNMLEGDLHPLSHLASLVSLNISYNNFTGYLPDTKIFRHLSPEEIVGNSGLCSKIQDSCFLNDYSRKQLTETISSRTLKLVIGLLVVLTLIFVVVIIISVTRSRTVRGKNNHHSEMGNTWTWQFTPFQRLNFAVEHVLRSLSEENIIGKGCSGVVHRVDIGNDEAIAVKKLWPTTIVSSDIGAANDDEKRGARNSFSRELKILGLIRHRNIVKLLGYCWSDTMRLLMYEYMPNGSLSSLLHERDDDENSCLEWEVRYKILLGAAQGLEYLHHDNNPPIVHRDIKSSNILIGPEFDACIADFGLAKFVDDCGFGKSSNIVAGSWGYIAPEYGYMMKITEKSDVYSFGVVMLEVLTGKKPINDPSIPEGSHISEWVREKGEQIVQVLDSTLLQASQELEIGEMKEALGIALLCLTSAPNQRPSMRNVATMIKEIKQVSEEEYADFHTLLKEDSPTPLTGPSNATPSCLYPKSPSSSSPRRSSFSIVELG 1117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi09g2026 1117 SMART LRR_typ_2 403 427 IPR003591 -
Mibi09g2026 1117 SMART LRR_typ_2 451 475 IPR003591 -
Mibi09g2026 1117 SMART LRR_typ_2 283 307 IPR003591 -
Mibi09g2026 1117 SMART LRR_typ_2 523 547 IPR003591 -
Mibi09g2026 1117 SMART LRR_typ_2 138 162 IPR003591 -
Mibi09g2026 1117 SMART LRR_typ_2 186 211 IPR003591 -
Mibi09g2026 1117 SMART LRR_typ_2 548 572 IPR003591 -
Mibi09g2026 1117 SMART LRR_typ_2 644 669 IPR003591 -
Mibi09g2026 1117 SMART LRR_typ_2 235 259 IPR003591 -
Mibi09g2026 1117 FunFam Leucine-rich repeat receptor protein kinase EMS1 517 602 - -
Mibi09g2026 1117 ProSitePatterns Serine/Threonine protein kinases active-site signature. 908 920 IPR008271 GO:0004672|GO:0006468
Mibi09g2026 1117 ProSiteProfiles Protein kinase domain profile. 771 1077 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi09g2026 1117 SUPERFAMILY Protein kinase-like (PK-like) 746 1059 IPR011009 -
Mibi09g2026 1117 Pfam Leucine rich repeat N-terminal domain 30 64 IPR013210 -
Mibi09g2026 1117 Gene3D Ribonuclease Inhibitor 174 274 IPR032675 -
Mibi09g2026 1117 Gene3D Ribonuclease Inhibitor 275 374 IPR032675 -
Mibi09g2026 1117 ProSitePatterns Protein kinases ATP-binding region signature. 777 800 IPR017441 GO:0005524
Mibi09g2026 1117 Gene3D Transferase(Phosphotransferase) domain 1 861 1080 - -
Mibi09g2026 1117 Pfam Leucine rich repeat 453 512 IPR001611 GO:0005515
Mibi09g2026 1117 Gene3D Phosphorylase Kinase; domain 1 746 860 - -
Mibi09g2026 1117 Pfam Leucine Rich Repeat 405 422 IPR001611 GO:0005515
Mibi09g2026 1117 Pfam Leucine Rich Repeat 117 138 IPR001611 GO:0005515
Mibi09g2026 1117 Gene3D Ribonuclease Inhibitor 22 173 IPR032675 -
Mibi09g2026 1117 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 198 421 - -
Mibi09g2026 1117 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 340 1060 - -
Mibi09g2026 1117 SUPERFAMILY L domain-like 31 392 - -
Mibi09g2026 1117 MobiDBLite consensus disorder prediction 1076 1117 - -
Mibi09g2026 1117 FunFam Putative LRR receptor-like serine/threonine-protein kinase 603 687 - -
Mibi09g2026 1117 SUPERFAMILY L domain-like 372 692 - -
Mibi09g2026 1117 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 861 1077 - -
Mibi09g2026 1117 Gene3D Ribonuclease Inhibitor 402 692 IPR032675 -
Mibi09g2026 1117 MobiDBLite consensus disorder prediction 1082 1111 - -
Mibi09g2026 1117 Pfam Protein kinase domain 773 1055 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi09g2026 1117 FunFam Nuclear pore complex protein NUP107 23 177 - -
Mibi09g2026 1117 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 422 516 - -
Mibi09g2026 1117 SMART serkin_6 771 1063 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi09g2026 Mibi-ChrMibi09 39573939 39578154 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi09g2026 21 1064 Receptor kinase-like Gene Family AT5G56040 43.318 0.0 814
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Mibi09g2026 Pkinase 2.3e-40 CL0016