Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi09g2024 ATGCTTCTAGACAAGAATGCCCAAAAAGAAACCCTTTATGATGTTCTTAGTGTGAAGGAAGATGCAAGCTATGAAGAGATTCGTGCTAGTTACCGCAGTGCTATACTCAATTTACATCCTGATAAATTATTGAAGGCATCTGAAATGTCAAGCAGTCGTCAAACTTCAGGAGACAGATTTCTAACTGTGCAGAAGGCATGGGAAATCCTTAGCAATTCAACTTCTCGTTCAGTTTATGACAATGAGCTGAATGGTTCAAGGCAGGATGCATTGGCTGCAGATGTTGCAGAAGATGTGATTTTGCAAGATATGATCATTGAAGAAGCTGGAGAAGCATTAGATTTGTCATACCAGTGTAGATGTGGTGACTACTTCACAATAGATTCTACAGAATTGGAGAAAATGGGGTATTCATTGTTGAGGGATGGTTGTGAGATTTCTTTACGTACTGTTGATAGTTTACCAGGTTCAGTGATTCTTCCATGTGGATCTTGTTCTCTGAAAGTTCGTTTATTAATCAACATGGATGATAGCATTTGA 540 0.387 MLLDKNAQKETLYDVLSVKEDASYEEIRASYRSAILNLHPDKLLKASEMSSSRQTSGDRFLTVQKAWEILSNSTSRSVYDNELNGSRQDALAADVAEDVILQDMIIEEAGEALDLSYQCRCGDYFTIDSTELEKMGYSLLRDGCEISLRTVDSLPGSVILPCGSCSLKVRLLINMDDSI 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi09g2024 179 PRINTS DnaJ domain signature 13 31 IPR001623 -
Mibi09g2024 179 PRINTS DnaJ domain signature 31 46 IPR001623 -
Mibi09g2024 179 PRINTS DnaJ domain signature 55 75 IPR001623 -
Mibi09g2024 179 Pfam DnaJ domain 12 80 IPR001623 -
Mibi09g2024 179 PANTHER DPH3 HOMOLOG-RELATED 11 177 IPR044248 GO:0017183|GO:0046872
Mibi09g2024 179 SUPERFAMILY CSL zinc finger 96 177 IPR036671 -
Mibi09g2024 179 ProSiteProfiles DPH-type metal-binding (MB) domain profile. 95 174 IPR007872 -
Mibi09g2024 179 SMART dnaj_3 10 75 IPR001623 -
Mibi09g2024 179 CDD DnaJ 11 72 IPR001623 -
Mibi09g2024 179 Gene3D DnaJ domain 2 87 IPR036869 -
Mibi09g2024 179 ProSiteProfiles dnaJ domain profile. 11 83 IPR001623 -
Mibi09g2024 179 SUPERFAMILY Chaperone J-domain 9 84 IPR036869 -
Mibi09g2024 179 FunFam DNAJ heat shock N-terminal domain-containing protein-like 89 177 - -
Mibi09g2024 179 Pfam CSL zinc finger 99 172 IPR007872 -
Mibi09g2024 179 Gene3D DPH Zinc finger 88 179 IPR036671 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi09g2024 7 80 C2H2 Transcription Factor Family AT1G74250 39.189 1.70e-10 57.0