Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi09g2021 ATGAGTAGTCGTGGGGATGGTTCTGGTTCATCAAGATGGTGTCCAACACAAGAACAGGTTGTGATTCTGGAGGAGATGTACAGAGGAGGGATAAGAACTCCAAATGCATCCCAGATTCAGCATATCACTTCTCAACTTTCTTTCTATGGCAAGATTGAAGGCAAGAATGTTTTCTATTGGTTTCAGAACCACAAGGCCAGGGACAGACAGAAACTCAGAAGGAGACTCAACAAACAGCTTCAGTTACAGAAGCAGCAGCAACATCACCAGCTCTGTAACTATTACGTTCATCATTTAAATCACAGCCATAATCATCACCTGTATTCTCACTGCCCCATGGAGTCTCTTCTTTCCTCCTCATCATCTTCCCTACCACGCTCCTTTTACCACTCCCTTGCCCCTATTCCTGAGGGAGGAGCTGGGGAAGCATCAAAACAAGGGATGGATTACGTATGGGGGGTTGAAAATACAGAAGGAGGAGAGATGGAGCAGACATGGAAGGAAGATTATTGGAGGAGGACGAGGATGGAAGGAAGTCCAGCTAGTGCTGATTCATATTGGCCTACTACAAGAAACCTCAAGACTCTTGAACTTTTTCCTATCATGGATAGGATCAAACAAGTGTGA 627 0.4498 MSSRGDGSGSSRWCPTQEQVVILEEMYRGGIRTPNASQIQHITSQLSFYGKIEGKNVFYWFQNHKARDRQKLRRRLNKQLQLQKQQQHHQLCNYYVHHLNHSHNHHLYSHCPMESLLSSSSSSLPRSFYHSLAPIPEGGAGEASKQGMDYVWGVENTEGGEMEQTWKEDYWRRTRMEGSPASADSYWPTTRNLKTLELFPIMDRIKQV 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi09g2021 208 Gene3D - 6 71 - -
Mibi09g2021 208 SUPERFAMILY Homeodomain-like 11 71 IPR009057 -
Mibi09g2021 208 SMART HOX_1 8 75 IPR001356 GO:0003677
Mibi09g2021 208 FunFam WUSCHEL-related homeobox 4 10 77 - -
Mibi09g2021 208 Pfam Homeodomain 11 70 IPR001356 GO:0003677
Mibi09g2021 208 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 5 202 IPR044555 GO:0003700|GO:0099402
Mibi09g2021 208 ProSiteProfiles 'Homeobox' domain profile. 6 71 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi09g2021 Mibi-ChrMibi09 39508323 39509327 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi09g2021 9 78 Wox Gene Family AT2G28610 78.571 3.78e-37 128
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Mibi09g2021 Homeodomain 2.4e-17 CL0123