Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi09g2019 ATGTCTGGAATTTTCAATAAAAGGAGAGCGTTGGAAGACAGGTGTTCTAGTATTCTACTATTATTCACTTTACTTCTTTATACTACGGAGGGATTGAACACAGAGGGGCAGTACTTGCTTGAGCTGAAGAGTAGTCTTCATGATGAATCCAATCACTTGGCAAATTGGAAGTCAACTGATGAAACGCCTTGTGGATGGACGGGTGTAAATTGCACTTATGACTATAATCCAGTGGTCTGGTCCCTTGATTTGAGTTCAATGAATCTTTCTGGAACTCTAAATCCTAGCATTGGAGGTCTCACACATCTAACTTTTCTCAGCCTTTCCAGCAATGGGCTGATGGGAAATGTGCCCAGTGAGATTGGAAATTGCTCGAGCTTGGAATTTCTTTTTTTGGACAATAATCGATTCAGTGGAAAAATTCCTCCTGAATTGGGTAAGCTGTCTCTTTTGAGAAGTTTGAATATTTGCAACAACAGATTCTCAGGTTCTCTGCCAGAGGAACTGGGAAACTTGACTTCACTGGTTGAGCTTGTGGTCTTCACAAACAATCTGACTGGTCCCCTGCCTCATTCGATTGGAAATCTGAAGAGTCTCACTACTTTGAGAGCTGGAGGAAATGGATTGTCTGGTAGCTTGCCGAGTGAGATCGGTGGATGTACAAGCATGGAGTTTCTTGGCCTTGCTCAAAATCAGATAGGAGGAGAACTACCAACAGAGATTGGGATGCTTCAGAACTTAAGAGAACTGGTTTTATGGAATAACCAGTTAACAGGGTGTATTCCTAAAGAGATTGGAAATTGTACCAGCCTTGAAACCCTTGCTTTATATGGAAATGCTCTTGTTGGGCCTATACCTGATGAGATTGGGAGTCTTGAATCTCTGGGGAGGTTGTACCTTTACAGAAATAAGTTGAATGGAACCATTCCAAGGACAATTGGGAACCTTTCCCTGGCATTGGAAATTGATTTCTCAGAAAACTCTTTGGTGGGTGAGATTCCCTCTGAGATCAGCAAAATCAGTGGTCTCCAGTTGTTCTTTCTCTTTGAGAACCAGCTATCGGGTGTTATCCCCAATGAGTTTAGTAGCTTGAGGAATCTGACAAGGCTGGACCTGTCCATTAATAATCTCACAGGTCCAGTTCCATTGGGGTTCCAGTACTTGAATCAAATGACTCAGTTGCAACTTAATGACAACTCTCTAATTGGAAATATTCCTCAGAGCCTTGGACTTTATAGTCCTCTTTGGGTGGTTGATTTCTCTAATAATCACTTGACAGGAACAATACCTCCTCATCTATGTCGGAACTCTAAGTTGATGCTGTTGAATCTGGCTTCTAATCGGCTGTATGGAAATATACCAACGGACATCCTGAACTGCAAAGCATTGGCACTGCTCCTGTTGGTTGAGAATAGTCTTACTGGTGGTTTTCCTTCAGAACTGTGCAAACTAGTGAACCTTACTGCCATTGAGCTGAACCAGAACAGGTTCAGTGGTCCTATTTCTCCTGATATTGGGTTGTGCCACAAGTTGCAGAGGCTTCATATTGCTAACAACTACTTCACATTAGAGTTGCCTAAAGAAATAGGAAACCTTTCTCAATTAGTGACCTTCAATGTTTCATCCAATTCTTTTGTTGGACCAATCCCACATGAAATTGTTAGATGCAAGAAGCTTCAGCGAATCGATGTCAGCAGAAATAGCTTTACTGGTTCTCTACCAGATGAGCTAGGAACTCTGTCGCAGTTGGAGATTCTCAAGATCTCAGATAATAAGCTTACAGGGCATATTCCTCCAACATTAGGTAATCTGCTTCGTTTGACTGCATTGCAGATGGGTGGCAATTTACTTTCTGGAGAAATACCTCCTGATCTGGGTAATCTCACGAGCTTACAGATTGCATTGAATCTTAGTTACAATAACCTTTCTGGAAGTATACCTGATAAGCTTGGCAATCTCTATATGCTTGAGTTTCTCCTCTTGAATAATAATAATCTGACTGGTGAAATTCCCAGCACATTTGACAACCTTTCAAGTTTGATGGGGTGTAATTTCTCATACAACAAACTTTCTGGACCTATACCTTCCATTCCTCTATTTGGAAATATGGAAATTAGCAGCTTTGTGGGTAACAATGGCCTCTGTGGTGCTCCTCTGCTTGGCTGCAACACTAATCCATCTTCTCTTTCTGATCCTCCTTTGGAAAATGCTAATTCTTCTCGCACCAGGATTATCACTATTATTGCAACAGTCATTGGTGGCATTTCTCTCATTCTAATAGTATTCATTTTATATTTGATGAGACGTCATCCTGAGCCTATTTCTTCCTTGAGGGATTCTGAGATTCCCTCCCCAGATTCAGATATCTATTTTCCTCCAAAAGATGGCTTCACATTCCATGATCTACTTGAAGCTACCAACAGCTTTCATGAGAGTTATGTTATAGGAAGAGGGGCTTGTGGAACAGTTTATAAGGCGGTGATGCCATCTGGGAAGACCATTGCTGTTAAAAGGTTAGCATCCAACAGGGAAGGGAACAACATCGAGAATAGCTTCCGGGCTGAGATATTAACTCTCGGGAAGATAAGGCACCGAAATATAGTGAAGCTGTATGGATTTTGCTATCACCAAGGTAGCAATCTCCTGCTTTATGAGTACATGGCAAGGGGTAGCCTGGGGGAGCAACTTCATGGATTTGCAAGTAATTTGGAATGGCCAACTCGGTTCAATATTGCTCTTGGGGCCGCAGAGGGTCTTGCTTACTTGCATCATGACTGCAAACCAAAGATCATTCACCGGGATATAAAATCGAACAACATTCTACTTGATGAAAACTTTGAGGCCCATGTGGGTGATTTTGGTTTGGCAAAAGTCATTGACATGCCTCAATCAAAATCAATGTCTGCAGTTGCTGGATCATATGGTTATATTGCTCCCGAATATGCATACACCATGAAGGTCACTGAGAAGTGTGACATCTATAGCTATGGAGTTGTGCTGTTGGAGTTGCTAACTGGAAAAACTCCGGTTCAGCCGCTAGAGCAAGGTGGCGATCTGGTGACGTGGTCCAAAAACTATATCCGGAGCCATAACAACACACTGTCTTCTGGTCTGCTTGACAATCGCCTCAACCTCCAAGATCAAACCATTGTGAACCACATGCTCACTGTTCTTAAAATTGCTTTGCTCTGCACAAACATGACCCCTACCGATCGCCCATCGATGCGACAGGTCGTGTTAATGCTTATAGAATCCAACGAGCGAGAAGGAAACTTGACCGTTTCTCCATCTCGGTATGAGGATCTTGCTTCGAAAGAAGATGATGAGCAAAAGAGTATGTGA 3342 0.4237 MSGIFNKRRALEDRCSSILLLFTLLLYTTEGLNTEGQYLLELKSSLHDESNHLANWKSTDETPCGWTGVNCTYDYNPVVWSLDLSSMNLSGTLNPSIGGLTHLTFLSLSSNGLMGNVPSEIGNCSSLEFLFLDNNRFSGKIPPELGKLSLLRSLNICNNRFSGSLPEELGNLTSLVELVVFTNNLTGPLPHSIGNLKSLTTLRAGGNGLSGSLPSEIGGCTSMEFLGLAQNQIGGELPTEIGMLQNLRELVLWNNQLTGCIPKEIGNCTSLETLALYGNALVGPIPDEIGSLESLGRLYLYRNKLNGTIPRTIGNLSLALEIDFSENSLVGEIPSEISKISGLQLFFLFENQLSGVIPNEFSSLRNLTRLDLSINNLTGPVPLGFQYLNQMTQLQLNDNSLIGNIPQSLGLYSPLWVVDFSNNHLTGTIPPHLCRNSKLMLLNLASNRLYGNIPTDILNCKALALLLLVENSLTGGFPSELCKLVNLTAIELNQNRFSGPISPDIGLCHKLQRLHIANNYFTLELPKEIGNLSQLVTFNVSSNSFVGPIPHEIVRCKKLQRIDVSRNSFTGSLPDELGTLSQLEILKISDNKLTGHIPPTLGNLLRLTALQMGGNLLSGEIPPDLGNLTSLQIALNLSYNNLSGSIPDKLGNLYMLEFLLLNNNNLTGEIPSTFDNLSSLMGCNFSYNKLSGPIPSIPLFGNMEISSFVGNNGLCGAPLLGCNTNPSSLSDPPLENANSSRTRIITIIATVIGGISLILIVFILYLMRRHPEPISSLRDSEIPSPDSDIYFPPKDGFTFHDLLEATNSFHESYVIGRGACGTVYKAVMPSGKTIAVKRLASNREGNNIENSFRAEILTLGKIRHRNIVKLYGFCYHQGSNLLLYEYMARGSLGEQLHGFASNLEWPTRFNIALGAAEGLAYLHHDCKPKIIHRDIKSNNILLDENFEAHVGDFGLAKVIDMPQSKSMSAVAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLTGKTPVQPLEQGGDLVTWSKNYIRSHNNTLSSGLLDNRLNLQDQTIVNHMLTVLKIALLCTNMTPTDRPSMRQVVLMLIESNEREGNLTVSPSRYEDLASKEDDEQKSM 1113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi09g2019 1113 SUPERFAMILY L domain-like 308 406 - -
Mibi09g2019 1113 Gene3D Phosphorylase Kinase; domain 1 782 886 - -
Mibi09g2019 1113 Gene3D Ribonuclease Inhibitor 31 184 IPR032675 -
Mibi09g2019 1113 Pfam Leucine rich repeat 246 305 IPR001611 GO:0005515
Mibi09g2019 1113 FunFam Leucine-rich repeat receptor-like protein kinase PEPR1 31 189 - -
Mibi09g2019 1113 FunFam Probable leucine-rich repeat receptor-like protein kinase At2g33170 190 282 - -
Mibi09g2019 1113 ProSiteProfiles Protein kinase domain profile. 809 1083 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi09g2019 1113 Pfam Protein kinase domain 810 1079 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi09g2019 1113 SUPERFAMILY L domain-like 385 722 - -
Mibi09g2019 1113 SMART serkin_6 809 1082 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi09g2019 1113 Gene3D Transferase(Phosphotransferase) domain 1 887 1102 - -
Mibi09g2019 1113 Gene3D Ribonuclease Inhibitor 284 387 IPR032675 -
Mibi09g2019 1113 SMART LRR_typ_2 364 387 IPR003591 -
Mibi09g2019 1113 SMART LRR_typ_2 100 124 IPR003591 -
Mibi09g2019 1113 SMART LRR_typ_2 292 316 IPR003591 -
Mibi09g2019 1113 SMART LRR_typ_2 580 604 IPR003591 -
Mibi09g2019 1113 SMART LRR_typ_2 653 676 IPR003591 -
Mibi09g2019 1113 SMART LRR_typ_2 196 220 IPR003591 -
Mibi09g2019 1113 SMART LRR_typ_2 148 172 IPR003591 -
Mibi09g2019 1113 SMART LRR_typ_2 244 268 IPR003591 -
Mibi09g2019 1113 SUPERFAMILY Protein kinase-like (PK-like) 784 1082 IPR011009 -
Mibi09g2019 1113 PANTHER UNNAMED PRODUCT 19 113 - -
Mibi09g2019 1113 ProSitePatterns Serine/Threonine protein kinases active-site signature. 930 942 IPR008271 GO:0004672|GO:0006468
Mibi09g2019 1113 Gene3D Ribonuclease Inhibitor 388 726 IPR032675 -
Mibi09g2019 1113 Gene3D Ribonuclease Inhibitor 185 283 IPR032675 -
Mibi09g2019 1113 Pfam Leucine rich repeat N-terminal domain 33 71 IPR013210 -
Mibi09g2019 1113 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase 775 886 - -
Mibi09g2019 1113 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 412 726 - -
Mibi09g2019 1113 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 887 1098 - -
Mibi09g2019 1113 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase isoform B 284 388 - -
Mibi09g2019 1113 SUPERFAMILY L domain-like 34 316 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi09g2019 Mibi-ChrMibi09 39486337 39490198 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi09g2019 54 1082 Receptor kinase-like Gene Family AT1G73080 38.476 0.0 650
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Mibi09g2019 Pkinase 4.1e-48 CL0016