Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi09g1997 ATGATTTTAGCACAAGTCTGTAGCTTATTTTATGATTTTGGGAGCGAAGGTTTTTGTGAAAAATGCTATGGTCATCAGGATATTGATCTCATGTATAAACTCAGTTTCTTGCACTGCACGCAATCCATCTTGATAAAGATTGGTTTGTATGCGGCAATGTTTGCTAAATCAACTAATTTCAGAGTTGGAACTCAAGTTTATGTTGAGGACCCTGGGGAAGCTTGGATAGAAGGAGAAATTGTGGAAAATGATGGCGAAGAAATCAAAGTAAAGTGTGTATCAGATAAGATGGTTGTGGTGAAGGCCTACAATGTCCATCCCAAGGATCCTGAGTTCCCTCCTTCTGGTGTGGATGACATGACAAGGCTGGCATATCTGCATGAGCCAGGGGTTCTCCAGAATTTGCAAATTCGATATGACGCCAATGAAATATATGTAAGCATTGGCCTAGCCTTTTGTTTTAAATTACCTGAATTGTATGGCCGCGATGTGATGGAAAAGTACAAAGGATCAGCGATTGGTGAATTGGCCCCGCATCCTTTTGCAATTGCTGATTATGCATATAGGTTGATGTTAAATGAAGGAAAAAGCCAATCAATTTTGGTAAGTGGTGAAAGTGGAGCCGGAAAAACAGAGAGCACAAAGATGCTTATGCAATATCTTGCCTTTATGGGTGGGAGAAAGGAATCTGAGGGACGATCAGTGGAGCAGCAAGTTCTAGAGTCCAATCCTGTTTTAGAAGCATTTGGCAATGCAAAGACAGTTAGAAACAATAATTCAAGTCGATTTGGGAAGTTTGTAGAGCTACAGTTTGATCATACAGGGAGAATTTCAGGAGCTGCTATTAGAACGTATTTGCTGGAACGATCCCGCGTCTGTCAAGTTTCAGACCCTGAGAGAAACTACCATTGTTTCTATATGATTTGTGCTGCACCAGAAGAGGATATTAAAAGGTTTAAATTGGGAAATCCAAGAACATATCATTACCTAAACCAATCAAGTTTCTTCGAATTGGATGGATTGGACGAATCCAAGGAGTATCTTGCAACTAGGAGAGCTATGGAGGTTGTTGGCATCACATCTGATGAGCAGGATGCTATATTCAGAGTATTAGCTGCAATACTTCATTTAGGAAATATTGAATTTGAGAAGGGGGATGAGCCGGATTCCTCTGAACCAAAGGATGATCAATCTCGTTTCCACCTAAAAACCACAGCTGAACTTTTGATGTGCGACGAGCAGTCACTTGAGGACTCCTTGTGCAAACGTGTCATGGTAACACGTGGTGAGGCCATAACAAAAAGGCTTAATCCAAATTCGGCAGCTCTCAGTAGAGATTCATTGGCCAAAATAGTTTACTCAAAGCTGTTTGACTGGATTGTGAACAGGATTAATAACTCTATCGGTCAAGATCCTGATTCAAAGAGCTTAATTGGAGTTCTGGATATATATGGATTCGAGAGTTTCAAGACGAACAGTTTTGAGCAATTTTGTATCAACCTGACAAATGAGAAATTACAGCAGCATTTCAACCAGCATGTCTTCAAAATGGAGCAAGAGGAATATACAAAGGAAGAGATTGATTGGAGTTATATAGAGTTCATTGATAATCAGGATGTCCTTGATCTCATTGAGAAGAAACCTGGCGGCATCATTGCTCTTCTTGACGAGGCTTGTATGTTTCCAAGATCAACACACGAAACATTTGCCCAAAGGTTATATCAAGCTTTTAAAGAGAATAAACGCTTCAACAAACCAAAGTTGTCTCGTACTGATTTCACCATCTGCCATTATGCTGGTGATGTCACATATCAGACCGATTTCTTCCTTGACAAGAACAAAGACTATGTTGTCCCAGAGTTTGAGGCACTACTCAACGCTTCAAAGTGCTCCTTTGTTTCAGGATTGTTTCCACCTCCAACTGAGGAAACTTCCAAATCATCAAAGTTCTCTTCAATAGCCACCCAGTTTAAGCAACAACTACAATCTTTGCTTGAAACGCTGAATGCTACTGAGCCACATTACATTCGCTGCATAAAACCAAATAATCTTCTCAGGCCAAGGATATTTGAGAATGCTAATGTCTTACAGCAGCTTCAATGTGGGGTGGGCAAGAGTAAAGTATTTCTGAGAGCAGGACAGATGGCAAAACTAGATGCATGCCGTGCTGAGGTCTTAGGACGATCTGCAACCATTGTTCAGAGTAAAGTCCGCTCATTTTTTGGTCACAAAAAATACGTTCTGCTGCAGTTGGCTGCCATACAAATACAAACAATTTGTAGAGGAGAACTTGCGCGTTGCCTGTGCGAGAAAATGAGGAGGGAAGCTGCTTCTGTAAAAATTCAAAAGAATGGTCGCATGTATATTGCTAAAACATCTTATAAAACTTTGCATGCCGCAGCCATTTCCATTGAAACTGGTATGCGATGCATGGGTGCTAGAAATGAGCTCAAGTGCAGAAGGCGGACGGAAGCTGCAATTGTTATCCAAACTTACCGCCGAGGTTATGTAGCCTACATCCAACTCCTGAGGCTTAGAGAAGCAGCAATCATTATACAGTGCGCCTCGAGGGGACAAATGGCTCGTAAAGAATTTCAAAAGCTTCAGACGGTGATTCCCTTTTTCTCCCTTGCTTCTAGGGAAACTGGTGCTCTCAAATCTGCCAAAGAAAAACTTGAAAAGGAAGTTGAAGAATTAAATTCTTCCCTACAAATGGAGAAGAAGATGATGGCTGATGTTGAACAGGAAAATACGAAATTGCAATCTGCCTTGGAAGAGACTAAGGTGGAAAATTCAAAATTGCAACATGCTTTGGAAGAAGTTAAGGAGGAAAATGCAAAATTGCAATGTGCTGTAAAAGAAATTAAGGAGGAAAATACAAAACTGCAAACCTCCTTGGAAGAGGCTGAGGCATTACTCTTTCAGGAGCGCCAGGCAGCTAAAAACGCACTGGTTGAGTTGCTGGAAAAGAAAGTAGTTGACACTGAGAGGAAATCTGTAGAACGTGAGAGCAAACTTACTCAAGAACATGATGCTAAGTCGCCATCCATTCCAGAACATGATGCAGCAAGCAAAGCAGTTGATTTATCCTTTGGTATACATGAATTTTCAGTTGGTGACAATGAATTGAACAATAAACTTGCCGCAGAGAATGAACACCTCAAGTCACTGGTTAGTGCATTAGAAAAGGAAATTGATGAAAGTAACAGGCTTAGTGAAGAGCGCTTGAAGCAAGCATCAGCAAATGAAATGAAAGTAATTGAACTGAAGATGGCTATGCAAAGGCTTGAAGAAAAACTATCCGATATAGAAACAGAGGATCAAATTTTAAGGCAGCAGGCTCTACCGAATTCATCTTCTCGGAGAATGTCAGGAAATTTATCATTTTATAATTCTCAGCCTTCATGGAACGGTCATGATAGTTTTCGTTCATCTACTGCCGGTGTTGCACTTGATACTATTCGCCAAGTTGATGCCAAGTATCCAGCTTTGCTTTTCAAGCAGCAACTCACAGCATATGCGGAAAAGATTTATGGAATTGTTCGAGAGAATTTGAAGCAGGACTTGTCACCTCTGCTTACTTCTTGCATTCAGGCACCTAAAACATCAGAGCAAAACCCATCAGATGAACAGTCAACTGGTAATAGCGCCCCAGCTGGTTCTTGGCAGAGCATTATTGATTGCCTTAACAAATTTCTCAATATGATGAAAGAAAAACATGTGTCTCCTGTTCTAGTTCAGAAGATATTGACCCAGGTTTTCCAGTACATCAATGTACAACTCTTTAACAGTGAAGCCACAGAAGAGGCTAAAAATGAGAAGACCACAATATCTTATGATGATCTCACTAACGACTTGTGTCCTATCCTGAGTGTTCATCAACTTTACAAAATCTGTTTATTCTACGGGGATTGTAGTGTCAGTGAACAATGCGTATCAACGGATGTCATTACAAGGTTGAAGCTTCTAATGACAGATGATACACATGACGATAGCGACTCCTTCATGTTGGACGATGATTCAAGGTCAACCTCACTCATATGCTCGTATTCCAGGCTGACTAGAGATATTCTACTCTTGCCATGGAGCAATTTTTTTTGA 4101 0.4067 MILAQVCSLFYDFGSEGFCEKCYGHQDIDLMYKLSFLHCTQSILIKIGLYAAMFAKSTNFRVGTQVYVEDPGEAWIEGEIVENDGEEIKVKCVSDKMVVVKAYNVHPKDPEFPPSGVDDMTRLAYLHEPGVLQNLQIRYDANEIYVSIGLAFCFKLPELYGRDVMEKYKGSAIGELAPHPFAIADYAYRLMLNEGKSQSILVSGESGAGKTESTKMLMQYLAFMGGRKESEGRSVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVELQFDHTGRISGAAIRTYLLERSRVCQVSDPERNYHCFYMICAAPEEDIKRFKLGNPRTYHYLNQSSFFELDGLDESKEYLATRRAMEVVGITSDEQDAIFRVLAAILHLGNIEFEKGDEPDSSEPKDDQSRFHLKTTAELLMCDEQSLEDSLCKRVMVTRGEAITKRLNPNSAALSRDSLAKIVYSKLFDWIVNRINNSIGQDPDSKSLIGVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYTKEEIDWSYIEFIDNQDVLDLIEKKPGGIIALLDEACMFPRSTHETFAQRLYQAFKENKRFNKPKLSRTDFTICHYAGDVTYQTDFFLDKNKDYVVPEFEALLNASKCSFVSGLFPPPTEETSKSSKFSSIATQFKQQLQSLLETLNATEPHYIRCIKPNNLLRPRIFENANVLQQLQCGVGKSKVFLRAGQMAKLDACRAEVLGRSATIVQSKVRSFFGHKKYVLLQLAAIQIQTICRGELARCLCEKMRREAASVKIQKNGRMYIAKTSYKTLHAAAISIETGMRCMGARNELKCRRRTEAAIVIQTYRRGYVAYIQLLRLREAAIIIQCASRGQMARKEFQKLQTVIPFFSLASRETGALKSAKEKLEKEVEELNSSLQMEKKMMADVEQENTKLQSALEETKVENSKLQHALEEVKEENAKLQCAVKEIKEENTKLQTSLEEAEALLFQERQAAKNALVELLEKKVVDTERKSVERESKLTQEHDAKSPSIPEHDAASKAVDLSFGIHEFSVGDNELNNKLAAENEHLKSLVSALEKEIDESNRLSEERLKQASANEMKVIELKMAMQRLEEKLSDIETEDQILRQQALPNSSSRRMSGNLSFYNSQPSWNGHDSFRSSTAGVALDTIRQVDAKYPALLFKQQLTAYAEKIYGIVRENLKQDLSPLLTSCIQAPKTSEQNPSDEQSTGNSAPAGSWQSIIDCLNKFLNMMKEKHVSPVLVQKILTQVFQYINVQLFNSEATEEAKNEKTTISYDDLTNDLCPILSVHQLYKICLFYGDCSVSEQCVSTDVITRLKLLMTDDTHDDSDSFMLDDDSRSTSLICSYSRLTRDILLLPWSNFF 1366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi09g1997 1366 FunFam Class V myosin 487 628 - -
Mibi09g1997 1366 Gene3D - 300 358 - -
Mibi09g1997 1366 SMART MYSc_2a 109 724 IPR001609 GO:0003774|GO:0005524|GO:0016459
Mibi09g1997 1366 Pfam Myosin head (motor domain) 117 701 IPR001609 GO:0003774|GO:0005524|GO:0016459
Mibi09g1997 1366 FunFam Myosin 2 360 473 - -
Mibi09g1997 1366 Gene3D - 487 671 - -
Mibi09g1997 1366 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 775 870 IPR027417 -
Mibi09g1997 1366 ProSiteProfiles Dilute domain profile. 1147 1366 IPR002710 -
Mibi09g1997 1366 ProSiteProfiles IQ motif profile. 845 873 IPR000048 GO:0005515
Mibi09g1997 1366 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 89 776 IPR027417 -
Mibi09g1997 1366 ProSiteProfiles Myosin motor domain profile. 115 701 IPR001609 GO:0003774|GO:0005524|GO:0016459
Mibi09g1997 1366 Pfam IQ calmodulin-binding motif 752 768 IPR000048 GO:0005515
Mibi09g1997 1366 Pfam IQ calmodulin-binding motif 846 866 IPR000048 GO:0005515
Mibi09g1997 1366 CDD MYSc_Myo11 129 702 IPR036018 -
Mibi09g1997 1366 Coils Coil 1044 1074 - -
Mibi09g1997 1366 FunFam Myosin heavy chain 300 355 - -
Mibi09g1997 1366 SMART iq_5 796 818 IPR000048 GO:0005515
Mibi09g1997 1366 SMART iq_5 844 866 IPR000048 GO:0005515
Mibi09g1997 1366 SMART iq_5 821 843 IPR000048 GO:0005515
Mibi09g1997 1366 SMART iq_5 773 795 IPR000048 GO:0005515
Mibi09g1997 1366 SMART iq_5 748 770 IPR000048 GO:0005515
Mibi09g1997 1366 Pfam Myosin N-terminal SH3-like domain 63 104 IPR004009 GO:0003774|GO:0005524|GO:0016459
Mibi09g1997 1366 Gene3D Myosin VI head, motor domain, U50 subdomain 360 649 - -
Mibi09g1997 1366 FunFam unconventional myosin-Va 776 824 - -
Mibi09g1997 1366 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 61 110 IPR004009 GO:0003774|GO:0005524|GO:0016459
Mibi09g1997 1366 Coils Coil 1079 1113 - -
Mibi09g1997 1366 Gene3D Kinesin motor domain 118 701 IPR036961 -
Mibi09g1997 1366 MobiDBLite consensus disorder prediction 1200 1220 - -
Mibi09g1997 1366 ProSiteProfiles IQ motif profile. 749 778 IPR000048 GO:0005515
Mibi09g1997 1366 ProSiteProfiles IQ motif profile. 774 803 IPR000048 GO:0005515
Mibi09g1997 1366 PANTHER MYOSIN 107 1286 - -
Mibi09g1997 1366 ProSiteProfiles IQ motif profile. 822 848 IPR000048 GO:0005515
Mibi09g1997 1366 MobiDBLite consensus disorder prediction 996 1018 - -
Mibi09g1997 1366 Coils Coil 882 986 - -
Mibi09g1997 1366 MobiDBLite consensus disorder prediction 996 1023 - -
Mibi09g1997 1366 Gene3D - 776 823 - -
Mibi09g1997 1366 Gene3D - 824 871 - -
Mibi09g1997 1366 Gene3D - 726 775 - -
Mibi09g1997 1366 PRINTS Myosin heavy chain signature 197 222 IPR001609 GO:0003774|GO:0005524|GO:0016459
Mibi09g1997 1366 PRINTS Myosin heavy chain signature 244 271 IPR001609 GO:0003774|GO:0005524|GO:0016459
Mibi09g1997 1366 PRINTS Myosin heavy chain signature 477 505 IPR001609 GO:0003774|GO:0005524|GO:0016459
Mibi09g1997 1366 PRINTS Myosin heavy chain signature 530 558 IPR001609 GO:0003774|GO:0005524|GO:0016459
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi09g1997 Mibi-ChrMibi09 39292355 39308980 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi09g1997 1201 1341 Myosins gene family AT2G33240 38.462 5.79e-24 108