Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi09g1989 ATGGCAACAACGCAGACATGCTCTGCTGAACTATCCCAATACCTGGGCCCCAACGCCACGGCCGCCGCCGACCTCATCTGCAACAAATTCTCCGACACGACCTACGCGGTGGACACCACGTTCCTCCTCTTCTCCTCGTACCTCGTCTTCTCCATGCAGCTAGGCTTCGCCATGCTCTGCGCCGGCTCCGTACGAGCCAAGAACACCATGAACATCATGCTCACCAACGTCCTCGACGCCGCCGCCGGCGCTCTCTTCTACTTCCTCTTCGGCTTCTCCTTCGCCTTCGGCTCCAACACCAACCCCTTCATCGGCCACCACTCCTTCGCCCTCTCCAACCTCCCCTCACAACTCTTCGACTACTCCTTCTTCCTCTTCCAATACGCCTTCGCCATCGCCGCCGCCGGCATCACCAGCGGCTCCATCGCCGAGCGAACCCAGTTCGTCGCTTACCTCATCTACTCCTCCTTCCTCACCGGTTTCGTCTACCCCGTCGTCTCCCACTGGGTCTGGTCCCAAGGCGGATGGGCCAGCGCCGGTCGGACCGGCGGCGACCTCCTCTTCGGCTCCGGTTCCATCGACTTCGCCGGTTCCGGTGTCGTCCACATGGTCGGCGGCATCGCCGGTCTCTGGGGCGCTCTCATAGAAGGGCCCAGGATCGGCCGGTTCGACCACTCCGGTCGCCCGGTTTCGTTACGTGGGCACAGTGCTACATTGGTTGTTCTTGGGACTTTCTTGCTATGGTTCGGTTGGTACGGGTTCAACCCCGGTTCGTTTTTTACGATATTGAAACAGTACGAACCGGGGAGTTACTATGGGCAGTGGAGTGCGGTGGGGAGGGCCGCCGTGACGACCACCTTGGCCGGCTGCACCGCCGCGCTGACGACTTTGTTCTTGAAGAGGGTTGATTCTGGGCACTGGAATGTGACGGATGTTTGCAACGGTTTGCTCGGCGGGTTCGCGGCGATCACCGCAGGGTGCGCCGTCGTGGAGCCGTGGGCGGCGGTGGTGTGCGGGTTTGTGGCGGCGTTGGTTTTGATATCGTGCAATAAGCTGGCGGAGAGGGTGAGGTATGATGACCCGTTGGAGGCGGCGCAGCTACACGGAGGGTGTGGCGCGTGGGGGTTGGTGTTCACGGCGTTGTTCGCGACGGAGAGGTATGTGAGGGAGGTGTACGGAGGGTTGGAGGAGGGTAGTAGGCCGTACGGGTTGTTGATGGGTGGTGGTGGGAGGTTGTTGGCGGCGAATGTGGTGGAGATTTTGGTGATTGTTGGGTGGGTGAGTGTGACTATGGGGCCTTTGTTCTTGATTCTTCACAAGTTCAATCTATTGCGGATCTCCATGGAGGATGAGTTGGAGGGGATGGATCTTACCCGACATGGTGGTTTTGCTTATGCCTACGAGGATTCGTCCCTAAGGAATGGGCAGGCACAGATAGAGATGGAATGA 1449 0.597 MATTQTCSAELSQYLGPNATAAADLICNKFSDTTYAVDTTFLLFSSYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGALFYFLFGFSFAFGSNTNPFIGHHSFALSNLPSQLFDYSFFLFQYAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWVWSQGGWASAGRTGGDLLFGSGSIDFAGSGVVHMVGGIAGLWGALIEGPRIGRFDHSGRPVSLRGHSATLVVLGTFLLWFGWYGFNPGSFFTILKQYEPGSYYGQWSAVGRAAVTTTLAGCTAALTTLFLKRVDSGHWNVTDVCNGLLGGFAAITAGCAVVEPWAAVVCGFVAALVLISCNKLAERVRYDDPLEAAQLHGGCGAWGLVFTALFATERYVREVYGGLEEGSRPYGLLMGGGGRLLAANVVEILVIVGWVSVTMGPLFLILHKFNLLRISMEDELEGMDLTRHGGFAYAYEDSSLRNGQAQIEME 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi09g1989 482 TIGRFAM amt: ammonium transporter 38 465 IPR001905 GO:0008519|GO:0016020|GO:0072488
Mibi09g1989 482 ProSitePatterns Ammonium transporters signature. 194 219 IPR018047 GO:0008519|GO:0016020|GO:0072488
Mibi09g1989 482 Gene3D Ammonium transporter AmtB like domains 16 480 IPR029020 -
Mibi09g1989 482 PANTHER AMMONIUM TRANSPORTER 7 461 - -
Mibi09g1989 482 SUPERFAMILY Ammonium transporter 35 446 - -
Mibi09g1989 482 FunFam Ammonium transporter 19 479 - -
Mibi09g1989 482 Pfam Ammonium Transporter Family 41 465 IPR024041 GO:0008519|GO:0016020|GO:0072488
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi09g1989 Mibi-ChrMibi09 39189024 39190472 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi09g1989 6 480 Inorganic Solute Cotransporters AT4G13510 74.534 0.0 729