Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi09g1981 ATGTATTGGGGAGGCATGTCTGGGAACAACATGGGTTGGGGTATGAATATGATAGAGGAAGAAGGTTGGAGGAAGGGTCCTTGGACCGCTGAAGAAGACAGATTGCTTATTGAATATGTTAGGCTTCATGGTGAAGGAAGATGGAACTCTGTTTCTAGGCTTGCAGGATTGAAAAGAAATGGGAAAAGCTGCAGATTGAGGTGGGTGAATTATTTGAGGCCTGACCTCAAGAAGGGTCAGATAACACCTCAGGAAGAGAGTATCATTCTTGAGCTGCATGCTAGGTGGGGAAACAGGTGGTCAACGATTGCAAGAAGCTTACCAGGAAGAACTGATAATGAGATTAAGAACTACTGGAGGACTCATTTCAAGAAGAAGGCGAAAAATTCTCCTGATTCTGCCGAAAAGGCAAAAAATCGCCTCATAAGGAGGCAACAATTTCAGCAGCAACAACAGCAAATGCAGCAGCAGCAGCAGCAACAACAGCATCATGATCAACAGCAGCAACAACTGCAGCAACTTCAATTCAACTTAGACATCAAAGGGATTATGGCTCTTCTGGACGAAAATGATCATAAAGTGACTATGCCTTGTTTGTCTCAAATGAGGCAAGAAATGTATCAGAATACCATAGAAGAACAAGGCTACTTCTACTCTATGCTCAATAATGGCAATGCCTTAGCATCAGAACCATCAAATGATGATAATTTCTGGGATGGCTTGTGGAACTTGGATGATCTTCATGGAAATTTCAGTGCAGCAGCAAGCAAAGTCAATCTACACAATTTAGTTGCTCCCTTCTGCTAG 807 0.4275 MYWGGMSGNNMGWGMNMIEEEGWRKGPWTAEEDRLLIEYVRLHGEGRWNSVSRLAGLKRNGKSCRLRWVNYLRPDLKKGQITPQEESIILELHARWGNRWSTIARSLPGRTDNEIKNYWRTHFKKKAKNSPDSAEKAKNRLIRRQQFQQQQQQMQQQQQQQQHHDQQQQQLQQLQFNLDIKGIMALLDENDHKVTMPCLSQMRQEMYQNTIEEQGYFYSMLNNGNALASEPSNDDNFWDGLWNLDDLHGNFSAAASKVNLHNLVAPFC 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi09g1981 268 CDD SANT 27 72 IPR001005 -
Mibi09g1981 268 MobiDBLite consensus disorder prediction 145 166 - -
Mibi09g1981 268 SMART sant 77 125 IPR001005 -
Mibi09g1981 268 SMART sant 24 74 IPR001005 -
Mibi09g1981 268 ProSiteProfiles Myb-like domain profile. 73 123 IPR001005 -
Mibi09g1981 268 SUPERFAMILY Homeodomain-like 22 119 IPR009057 -
Mibi09g1981 268 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 24 72 IPR017930 -
Mibi09g1981 268 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 73 127 IPR017930 -
Mibi09g1981 268 FunFam Myb transcription factor 25 77 - -
Mibi09g1981 268 PANTHER MYB TRANSCRIPTION FACTOR-RELATED-RELATED 19 203 IPR044676 GO:0003700|GO:0006355|GO:0043565
Mibi09g1981 268 Coils Coil 147 174 - -
Mibi09g1981 268 CDD SANT 82 123 IPR001005 -
Mibi09g1981 268 FunFam MYB-related transcription factor 82 126 - -
Mibi09g1981 268 ProSiteProfiles Myb-like domain profile. 20 72 IPR001005 -
Mibi09g1981 268 Pfam Myb-like DNA-binding domain 78 122 IPR001005 -
Mibi09g1981 268 Pfam Myb-like DNA-binding domain 25 72 IPR001005 -
Mibi09g1981 268 Gene3D - 25 77 - -
Mibi09g1981 268 Gene3D - 82 126 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi09g1981 Mibi-ChrMibi09 39111922 39113144 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi09g1981 20 268 MYB Transcription Factor Family AT4G13480 56.226 7.85e-89 263
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mibi09g1981 Myb_DNA-binding 1.7e-16 CL0123