Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi09g1968 ATGACTCTGGTTTTACTAGGCGGCGGCGGCGGAAATGGTGGCTCTTCTGGGGCCACCCCAAATGAACCTGTTGTGTCAAATCCTAAAGTTTTGGGTCAAGAATGTTCATCATCGTTTAAAGGTGAAGCTGAACTTGAACTGGGTTTGGGTCTAAGCCTTGGTGGTAGTGGTGGTGGTGGGAAGGTTAAGCCTTCTTCTGCATGGGGTGAGTGTGGTCGTATTTTGACGGCTAAGGACTTTCCTTCTGGTGTCTCTCATGGACCTTCTGTTGCTGCTTCTCGTTTCTCAGATAGAGTCAGTACTGTTGGTGGCTCTGTTTCTGGTACTAAGAGAGCTGCTGATTCTGTCACTCATGATGCTGGATCTCCTACTTCTGGCAGTCAGGTTGTTGGGTGGCCACCCATCAGGGCATATAGGATGAACAGCTTGATTAACCAAGCAAAGGCTCAGAGGGCTGAAGAAGATAAATCCAATGGCGACAAGAATAATCCAGATGATGTTTCAATTACTAAAAATGGCGCTGTCAACAATTCTGAAAAAAACCATCTCGGATTTGTGAAGGTGAATGTGGATGGAATTCGCATTGGGAGAAAGGTAGACTTGAATTCTCATTCAAGCTATGAGAATTTAGCTCGGACACTGGAAGAAATGTTTTTCAGGCCTGCTTCAGCTGCTAAATCAGCTGAGAAAGAGTCCGGAAAGAAACTTTCCAAGCTTTTGGATGAAACGTCTGAATTTGTGCTGACATATGAAGATAAAGAGGGTGATTGGATGCTTGTGGGAGATGTTCCCTGGAGGATGTTCCTCAGCTCAGTGAGAAGGCTCCGAATCATGAGAACATCTGAGGCCAATGGACTTGCTCCTAGATACCAAGAGAAAAATGAGAGGCTAAGGATTAAACCCATTTAG 909 0.4543 MTLVLLGGGGGNGGSSGATPNEPVVSNPKVLGQECSSSFKGEAELELGLGLSLGGSGGGGKVKPSSAWGECGRILTAKDFPSGVSHGPSVAASRFSDRVSTVGGSVSGTKRAADSVTHDAGSPTSGSQVVGWPPIRAYRMNSLINQAKAQRAEEDKSNGDKNNPDDVSITKNGAVNNSEKNHLGFVKVNVDGIRIGRKVDLNSHSSYENLARTLEEMFFRPASAAKSAEKESGKKLSKLLDETSEFVLTYEDKEGDWMLVGDVPWRMFLSSVRRLRIMRTSEANGLAPRYQEKNERLRIKPI 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi09g1968 302 MobiDBLite consensus disorder prediction 6 26 - -
Mibi09g1968 302 Gene3D - 177 292 - -
Mibi09g1968 302 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 44 285 IPR003311 GO:0005634|GO:0006355
Mibi09g1968 302 MobiDBLite consensus disorder prediction 103 129 - -
Mibi09g1968 302 SUPERFAMILY CAD & PB1 domains 184 278 - -
Mibi09g1968 302 Pfam AUX/IAA family 91 289 IPR033389 -
Mibi09g1968 302 FunFam Auxin-responsive protein 178 290 - -
Mibi09g1968 302 ProSiteProfiles PB1 domain profile. 183 282 IPR000270 GO:0005515
Mibi09g1968 302 MobiDBLite consensus disorder prediction 147 175 - -
Mibi09g1968 302 MobiDBLite consensus disorder prediction 103 132 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi09g1968 Mibi-ChrMibi09 38891177 38893532 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi09g1968 186 300 B3 DNA Binding Superfamily AT1G59750 32.759 4.46e-13 67.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Mibi09g1968 AUX_IAA 2.1e-62 CL0072