Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi09g1958 ATGCTTTTATATCACTTGGTGCAGGACGAAATCTCAAGCCCCATTAGTTCCCAAATTTTAGAGTTTTGTGACCCTGAATTGTTCCCAGAGACCCTGCAGAATTCTGAGGTTACCTCCAGCTCAAATTGTTGCTATGAAGATAACTCCTATAACCAGAATATATCTCTAGCTCTAGATGTAGACAATAGGTTCAACAATAACAATACAATCAACACACGAACCAGCACAAATCCGGCCAGCACCACCCCGTCTGCCATCACTACCAACAACAACAACAACAATAACACAACCAACAGTAGCAATCTGTCCATTATCTTTGACTCACAAGATGAAATTGACAATGACATTTCTGCTTCCATAGACTTCTCATCATCTACTGCTTTTCATGTCTCTCCATATCTCCCAGTCACAACTCAGCAGGATCAGCAATTTGGTTTCTCTTCACTGCAGCCTCAAGTCACACTTGCAGCAAGTTCAGGTGTGGAAGGCCTTGCACGATACCCCACTAACTCTGCTGTTCCACCTCTCATGAGGGCTCCATTAGCTTCTGTGTTTGAAGATGACTGCTTACCTTCTGCCCCTTATGTGCCTATGAACTCTTCTCCTTCTTGCTCTTATCTTAACCCTGGCATGGGACCTTACATGCCTATTGGCCCCCTTAATACTGCCTTGTCTGCTGACAGTTCTGGGATGTTTGGCGGCACAATTCTTTTAGGTTCTGAACTGCAGGCACATCAGGAACTGGATTACCAGGGAGAAAATGGTGGGATTTATTGTCCAGATTCAATTCAAAGGGTTTTCAACCCTCCAGACCTCCAGGCACTTAGTGCTGAGAATCAGCAACTGGTAGCTGGGGCTGGGAGTTCCACCACTTTGACACCAGAAATATCCAACTTGGAGGATTCTACCTTCAAGGCTGGAAAAATATCTGTTGAGCAGAGGAGAGAAAAGATTGTTAGATACTTGAAGAAAAGGAGTGAGAGAAATTTCAGCAAGAAAATCAAGTATGCTTGTCGCAAAACTCTAGCAGATAGCCGGCCTCGGGTTAGGGGAAGGTTTGCAAAGAATGATGATTTTGGAGATACTCATAGACCTGCTAGTAGCAATCATGAAGAAGATGATGAAGAAGACGTAGTTGTGAAGGAAGAAGATGATATGGTTGATTCCTCAGATATTTTTGCTCATATCAGTGGGGTGAACTCCTTCAAATACAACAACAGCTTTTCCATCCCGTCCTGGATTTAA 1245 0.4361 MLLYHLVQDEISSPISSQILEFCDPELFPETLQNSEVTSSSNCCYEDNSYNQNISLALDVDNRFNNNNTINTRTSTNPASTTPSAITTNNNNNNNTTNSSNLSIIFDSQDEIDNDISASIDFSSSTAFHVSPYLPVTTQQDQQFGFSSLQPQVTLAASSGVEGLARYPTNSAVPPLMRAPLASVFEDDCLPSAPYVPMNSSPSCSYLNPGMGPYMPIGPLNTALSADSSGMFGGTILLGSELQAHQELDYQGENGGIYCPDSIQRVFNPPDLQALSAENQQLVAGAGSSTTLTPEISNLEDSTFKAGKISVEQRREKIVRYLKKRSERNFSKKIKYACRKTLADSRPRVRGRFAKNDDFGDTHRPASSNHEEDDEEDVVVKEEDDMVDSSDIFAHISGVNSFKYNNSFSIPSWI 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi09g1958 414 MobiDBLite consensus disorder prediction 68 97 - -
Mibi09g1958 414 Pfam CCT motif 314 356 IPR010402 GO:0005515
Mibi09g1958 414 MobiDBLite consensus disorder prediction 352 371 - -
Mibi09g1958 414 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 135 373 IPR045281 GO:0009909
Mibi09g1958 414 MobiDBLite consensus disorder prediction 352 378 - -
Mibi09g1958 414 ProSiteProfiles CCT domain profile. 314 356 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi09g1958 Mibi-ChrMibi09 38806995 38809158 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi09g1958 314 372 C2C2-CO-like Transcription Factor Family AT5G57660 46.875 1.41e-11 63.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Mibi09g1958 CCT 1.3e-18 CL0281