Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi09g1916 ATGGATCAAGTTATTGGTGGAAAATTCAAGCTCGGGAGGAAAATTGGGAGTGGGTCGTTTGGTGAACTGTATTTGGGTGTTAATGTGCAGAATGGAGAGGAAGTTGGTGTCAAGCTGGAACCTGTGAAGACCAAGCATCCTCAACTTCATTATGAGTCAAAACTATATATGCTTCTCCAAGGAGGAACTGGTATACCACATTTGAAATGGTTTGGAGTTGAGGGTGATTACAATGTCATGGTTATTGACCTTCTTGGACCAAGTTTAGAAGACTTGTTTAATTATTGCAATAGGAAATTCTCTCTAAAAACAGTTCTGATGCTAGCAGATCAGCTAATAAACAGAGTTGAATACATGCATTCCCGGGGTTTTCTTCACCGAGATATAAAGCCTGATAACTTTTTGATGGGTTTAGGCCGCAAAGCAAACCAGGTGTACATCATTGATTATGGCCTAGCAAAAAAGTATCGTGATCTCCAAACACATAAGCACATACCATATAGGGAAAACAAGAATCTAACAGGAACTGCTCGGTATGCAAGTGTTAACACTCATCTTGGAGTTGAACAAAGCAGAAGAGATGATCTAGAATCACTTGGATATGTGCTCATGTACTTCTTGAGAGGAAGTCTCCCATGGCAAGGCTTGAAAGCTGGCACTAAAAAGCAGAAATATGACAAGATCAGTGAAAAGAAGATGCTTACCCCAATAGAGGTCCTTTGCAAGTCATATCCTTCAGAGTTTACATCCTACTTTCACTATTGCCGATCATTGCGGTTTGAGGACAAACCTGATTATGCATACCTAAAGAGACTCTTCCGTGACCTATTTATTAGAGAAGGCTATCAGTTTGATTATGTATTTGATTGGACTATATTAAAATATCCACAGATTGGATCAAGTTCCAGATCACGGACAAGTGGGAAGCAAGTTATAAACCAAGGACCGTCTGCAGAAAGAGTAGAAAGGCCTTTAGTTGCACAAGAGACCCGGGAACGACTCCCAGGTTCAGTTGAAGCATTTGCTAGAAGAAGCGGCTCTGGTCTTCTTAGTGATCATTCTAGGCACAGATCATCAGATGGTGGGCCCTCATCCAAAGTAGTGCATCCTGATTCAGAGAGGACTCGTAGTTCTTCGCGCACCGGTAGTGCCTCGAAAAGGCCTGTTGTATCAAGCAGCCGACCAAGTTCCTCTGGTGAGCCTAGTGAAAGCCGTGCCAGCAGATTAATGTCTAGCAGTGGCCGTCTATCGACCACTCAAAGGATTCAGCCTGGTTTTGAGTCCAAATCATCATCATTCACCCGCGCTACAACATCAAGAGGCGGCCGTGATGATGCAATTAGGAGCTTTGAGCTTCTGTCAATTGGCACAGGGAAAAGGAAATGA 1386 0.43 MDQVIGGKFKLGRKIGSGSFGELYLGVNVQNGEEVGVKLEPVKTKHPQLHYESKLYMLLQGGTGIPHLKWFGVEGDYNVMVIDLLGPSLEDLFNYCNRKFSLKTVLMLADQLINRVEYMHSRGFLHRDIKPDNFLMGLGRKANQVYIIDYGLAKKYRDLQTHKHIPYRENKNLTGTARYASVNTHLGVEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYDKISEKKMLTPIEVLCKSYPSEFTSYFHYCRSLRFEDKPDYAYLKRLFRDLFIREGYQFDYVFDWTILKYPQIGSSSRSRTSGKQVINQGPSAERVERPLVAQETRERLPGSVEAFARRSGSGLLSDHSRHRSSDGGPSSKVVHPDSERTRSSSRTGSASKRPVVSSSRPSSSGEPSESRASRLMSSSGRLSTTQRIQPGFESKSSSFTRATTSRGGRDDAIRSFELLSIGTGKRK 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi09g1916 461 FunFam Casein kinase 1-like protein 1 329 - -
Mibi09g1916 461 MobiDBLite consensus disorder prediction 349 376 - -
Mibi09g1916 461 SMART serkin_6 9 433 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi09g1916 461 Pfam Protein kinase domain 10 228 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi09g1916 461 FunFam Putative Casein kinase I 1 85 - -
Mibi09g1916 461 PANTHER CASEIN KINASE-RELATED 13 371 - -
Mibi09g1916 461 ProSiteProfiles Protein kinase domain profile. 9 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi09g1916 461 MobiDBLite consensus disorder prediction 377 439 - -
Mibi09g1916 461 ProSitePatterns Serine/Threonine protein kinases active-site signature. 124 136 IPR008271 GO:0004672|GO:0006468
Mibi09g1916 461 MobiDBLite consensus disorder prediction 299 314 - -
Mibi09g1916 461 Gene3D Transferase(Phosphotransferase) domain 1 1 335 - -
Mibi09g1916 461 SUPERFAMILY Protein kinase-like (PK-like) 4 290 IPR011009 -
Mibi09g1916 461 MobiDBLite consensus disorder prediction 299 445 - -
Mibi09g1916 461 CDD STKc_CK1_delta_epsilon 8 282 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi09g1916 Mibi-ChrMibi09 38370133 38374413 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi09g1916 8 213 MAP Kinase Kinase Kinase AT3G06030 25.000 1.99e-13 70.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Mibi09g1916 Pkinase 3.6e-25 CL0016