Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi09g1904 ATGGTGAGAGCTCCATGCTGTGAGAAGATGGGATTGAAAAGGGGTCCTTGGACTCCAGAAGAAGACCAAATCTTGGTCTCCTACATTCAAAAAAATGGCCATGGCAATTGGAGAGCCCTCCCAAAGCAAGCTGGTCTTTTGAGATGCGGGAAGAGTTGCAGACTCAGGTGGATCAATTATTTAAGGCCAGATATCAAGAGAGGAAACTTCACATCAGAAGAAGAAGAAACCATCATTAAGCTCCATGACATGCTTGGCAACAGGTGGTCAGCAATTGCGGCAAAGTTACCAGGAAGAACCGACAACGAGATAAAAAATGTGTGGCATACCCACTTGAAGAAGAAACTCATTCAAAAAACAAGTGATCAATCTCATAATAATTCAGATTTCAAAACCAGATCATCATCAGCCTCCAAAAAATCTTCAATCAAAAGATCTGTTTCCAATTCCAGCACTGTGACAACTCAATCAGAAGCTGAAGCTGCAAGCTTCATGACCTCATCATCATCAGTTTCTTCTAGTGATTGTTATGGGCAGAGCATGATGAATAATCATAGTAATAATGTGGTCATTAAGTGTGAAGTAGACATGGATTCATCTTCTATGGAGCCTTATGTGTTGCCTGAGATTGATGAAAGCTTTTGGTCTGAAGCAGCAGCAGCAGCCATGGATGATGATAGTGGTAATAATGAGTTGTTACCAGTTCATCAATACCCATTTGACGATGGAATGGATTTCTGGTATGATGTGTTCATCAGATCTGGGGATTTTACCGAGCTGACCTTCTGA 789 0.4144 MVRAPCCEKMGLKRGPWTPEEDQILVSYIQKNGHGNWRALPKQAGLLRCGKSCRLRWINYLRPDIKRGNFTSEEEETIIKLHDMLGNRWSAIAAKLPGRTDNEIKNVWHTHLKKKLIQKTSDQSHNNSDFKTRSSSASKKSSIKRSVSNSSTVTTQSEAEAASFMTSSSSVSSSDCYGQSMMNNHSNNVVIKCEVDMDSSSMEPYVLPEIDESFWSEAAAAAMDDDSGNNELLPVHQYPFDDGMDFWYDVFIRSGDFTELTF 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi09g1904 262 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Mibi09g1904 262 Gene3D - 14 66 - -
Mibi09g1904 262 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Mibi09g1904 262 SMART sant 66 114 IPR001005 -
Mibi09g1904 262 SMART sant 13 63 IPR001005 -
Mibi09g1904 262 MobiDBLite consensus disorder prediction 117 164 - -
Mibi09g1904 262 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 218 - -
Mibi09g1904 262 FunFam MYB transcription factor 68 163 - -
Mibi09g1904 262 MobiDBLite consensus disorder prediction 121 164 - -
Mibi09g1904 262 Gene3D - 69 158 - -
Mibi09g1904 262 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Mibi09g1904 262 SUPERFAMILY Homeodomain-like 10 108 IPR009057 -
Mibi09g1904 262 CDD SANT 16 61 IPR001005 -
Mibi09g1904 262 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Mibi09g1904 262 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Mibi09g1904 262 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Mibi09g1904 262 CDD SANT 69 112 IPR001005 -
Mibi09g1904 262 FunFam Myb transcription factor 11 67 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi09g1904 Mibi-ChrMibi09 38252429 38254054 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi09g1904 1 261 MYB Transcription Factor Family AT2G31180 48.736 8.63e-79 236
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mibi09g1904 Myb_DNA-binding 6.9e-15 CL0123