Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi09g1901 ATGAGCAACGACCTGCAACGAGACTTCGTGGTGTTAACGGAGTTAGAACGTGGCAGATTCGGCACCGTCTATAAGTGCGTTTCCCGGAGTAACGCCGACGACATCTTCGCCGTCAAATCCATCAACAAACTCGTCGTCGGTGCCGGAGACTTCCTCGACGCTCGATGCCTCTCCACCGAGGTCAAAATCGTCCAACTTCTTAATCCCCACCCAAACATCGTCACCCTCCACAAAGTCTACGAGGACGATACTACCCTCCATATTATCTTTGAACTCTGCGACCACCCCGACCTCCACCGCCGCCTCCCCAGGGGCACCATCGTCTTTTCCGAGTCCGAGGCCTCCCTCATCATGCGCCAGCTCATGCATGCCGTCTCCCACTGCCACCGCCTCGGCGTAGCCCACCGCGACATCAAGCCCGAGAATATACTGTTCGCGGGAGGCCGGTTGAAATTAGCTGACTTCGGTTCGGCGGAGTGCTTCAAGGAGGGGGAGATGATGAGAGGGGTGGTTGGGACGCCGTATTATGTGGCGCCGGAGGTGGTGGCAGGGAGGGAGTATAGTGAGAAAGTGGATGTGTGGAGTTGTGGTGTTATTTTGTATATCATGTTATGTGGGACTCCGCCTTTTGACGGAGACTCCGAGGTTGACATTTTTGAGGCTGTTCTTAGGTGTAATCTCAGGTTTCCCCGACACTGTTTTCAGTCGGTTTCACGTGAGGCTAAGGATCTTGTTAGGAGGATGGTTTGTAGAGATGTTTCTAGGAGGCTATCGGCTGAGGAAGTTCTGAGTAAGGCATCCTTGGTTCAACGTGTTTGCAGAGAAGGCAACATGAGTGGGATGACCGTGATGGACACCCGCAAGGCTGTTTATTGA 876 0.5377 MSNDLQRDFVVLTELERGRFGTVYKCVSRSNADDIFAVKSINKLVVGAGDFLDARCLSTEVKIVQLLNPHPNIVTLHKVYEDDTTLHIIFELCDHPDLHRRLPRGTIVFSESEASLIMRQLMHAVSHCHRLGVAHRDIKPENILFAGGRLKLADFGSAECFKEGEMMRGVVGTPYYVAPEVVAGREYSEKVDVWSCGVILYIMLCGTPPFDGDSEVDIFEAVLRCNLRFPRHCFQSVSREAKDLVRRMVCRDVSRRLSAEEVLSKASLVQRVCREGNMSGMTVMDTRKAVY 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi09g1901 291 PANTHER SERINE/THREONINE-PROTEIN KINASE 3 266 - -
Mibi09g1901 291 Pfam Protein kinase domain 11 265 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi09g1901 291 FunFam Maternal embryonic leucine zipper kinase 3 278 - -
Mibi09g1901 291 SMART serkin_6 9 268 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi09g1901 291 ProSitePatterns Serine/Threonine protein kinases active-site signature. 133 145 IPR008271 GO:0004672|GO:0006468
Mibi09g1901 291 PIRSF ILK 2 284 - -
Mibi09g1901 291 Gene3D Phosphorylase Kinase; domain 1 1 93 - -
Mibi09g1901 291 Gene3D Transferase(Phosphotransferase) domain 1 96 288 - -
Mibi09g1901 291 ProSiteProfiles Protein kinase domain profile. 9 268 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi09g1901 291 CDD STKc_CAMK 8 264 - -
Mibi09g1901 291 SUPERFAMILY Protein kinase-like (PK-like) 6 264 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi09g1901 Mibi-ChrMibi09 38206427 38207760 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi09g1901 4 268 EF-hand Containing Proteins AT3G57530 42.435 5.78e-66 210
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Mibi09g1901 Pkinase 6.8e-69 CL0016