Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi09g1880 ATGAGGTGTGGAGGAGGAGATGACTATATGAATGGATTAATGTGGCCTCCAAGATCATACACTTGTAGCTTTTGCAAGAGAGAATTCAGATCTGCTCAAGCCCTTGGTGGCCACATGAATGTTCATAGGAGAGACAGAGCCAGGCTGAGGCAGCAAACACCTCCTCCTCCTCCTCCTCCCACCACCATCCTCAACCTCAATCTTAACCCTAATACTTCTGCCCCTTCCTTTTCTTCTTCTCCTTCTTCTACAATAATGCTCAAAAAACCATTCTCAACTATTCCTACCACTTTACCCTCCTTGGTTTCTCCCATACTTGCTTCTTCTTCTTCACCTTCTCATCCTCCCCCTCCATCTAATAATACATCATCTCCTTCTTCTTATGATCTGATGAAAAAGTGGGTTGTGGATGGTATCATGTTGAACCCTTCAAGCACCAAGGCCTCCTCAGAATCTACAAAGATGATGATGAAGAATAATGCAACTTCTTTATCAATGGGGTTTGGAGATCACTGTAATAATGACCCTTTTGCGCAAGAACATGGTGGTAATTGCAAAGCGGTGAAAAAGGCTGATGGCATCATTCGGTTGGACCTGCATATAGGTTTGCTTAGCGACTCCAAGGATGATTTAGATCTTGAGCTTCGATTGGGTACTTGCTCTTAG 666 0.4384 MRCGGGDDYMNGLMWPPRSYTCSFCKREFRSAQALGGHMNVHRRDRARLRQQTPPPPPPPTTILNLNLNPNTSAPSFSSSPSSTIMLKKPFSTIPTTLPSLVSPILASSSSPSHPPPPSNNTSSPSSYDLMKKWVVDGIMLNPSSTKASSESTKMMMKNNATSLSMGFGDHCNNDPFAQEHGGNCKAVKKADGIIRLDLHIGLLSDSKDDLDLELRLGTCS 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi09g1880 221 MobiDBLite consensus disorder prediction 37 82 - -
Mibi09g1880 221 ProSitePatterns Zinc finger C2H2 type domain signature. 22 42 IPR013087 -
Mibi09g1880 221 MobiDBLite consensus disorder prediction 65 82 - -
Mibi09g1880 221 ProSiteProfiles Zinc finger C2H2 type domain profile. 20 47 IPR013087 -
Mibi09g1880 221 PANTHER OS07G0101800 PROTEIN 11 219 - -
Mibi09g1880 221 SMART c2h2final6 20 42 IPR013087 -
Mibi09g1880 221 MobiDBLite consensus disorder prediction 105 127 - -
Mibi09g1880 221 Pfam C2H2-type zinc finger 20 44 - -
Mibi09g1880 221 Gene3D Classic Zinc Finger 17 55 - -
Mibi09g1880 221 SUPERFAMILY beta-beta-alpha zinc fingers 17 46 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi09g1880 Mibi-ChrMibi09 37849785 37850450 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi09g1880 4 56 C2H2 Transcription Factor Family AT5G06070 75.472 1.64e-22 89.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mibi09g1880 zf-C2H2_6 4.1e-07 CL0361