Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi09g1879 ATGAATAGTTCAGAAAATTCAAGCGGAGAAGAAACTGATCAGCTTGAAGATGGAGATTCTTCAGGAGGAACCAGAAGATCTTATGAGTGCACATTTTGCCGAAGGGGCTTCACTAATGCTCAGGCTTTAGGGGGTCATATGAACATTCATAGAAAAGATAGAGCCAAGGCCAAACAAAATAATAATAATTCTTCTTCTTCTTTTTCAAACAAAGTGTCCATTGAGGATTCTTTTGCTGATTCAGCATCCCCTCAATCCTCAAGGTTTTACTCCATTTTTGAGGTTCATCAGGGAAACTATAACATGTATTTCCAGCCATCTTCTGCAACAATAAACCCTAGAAATCCTTCTCCTGCTTCATATGCCTTTCCCTTTGAGTGTCTTAATCCAAGGTCTCACCATCATCAGTCTGTGGATGTGAACCACCAAGAGCTTCTTGGGGCTAATTTGAGTCTCCAGATTGGTCCAAATCATGTGGAAAGTACTCAGAAAGATAGTGAAGTGGACTTAGAGCTCAGACTTGGCCATCATCCTTATTGA 540 0.4056 MNSSENSSGEETDQLEDGDSSGGTRRSYECTFCRRGFTNAQALGGHMNIHRKDRAKAKQNNNNSSSSFSNKVSIEDSFADSASPQSSRFYSIFEVHQGNYNMYFQPSSATINPRNPSPASYAFPFECLNPRSHHHQSVDVNHQELLGANLSLQIGPNHVESTQKDSEVDLELRLGHHPY 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi09g1879 179 ProSiteProfiles Zinc finger C2H2 type domain profile. 28 55 IPR013087 -
Mibi09g1879 179 SUPERFAMILY beta-beta-alpha zinc fingers 25 54 IPR036236 -
Mibi09g1879 179 PANTHER OS07G0101800 PROTEIN 2 177 - -
Mibi09g1879 179 MobiDBLite consensus disorder prediction 1 25 - -
Mibi09g1879 179 Gene3D Classic Zinc Finger 4 87 - -
Mibi09g1879 179 ProSitePatterns Zinc finger C2H2 type domain signature. 30 50 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi09g1879 Mibi-ChrMibi09 37839257 37839796 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi09g1879 21 61 C2H2 Transcription Factor Family AT3G53820 73.171 1.45e-15 68.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mibi09g1879 None None None