Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi09g1878 ATGTTAAGAAGGGTAGCATCTGGACTGTTGATTTCCTCGCTCCTCATATGTGTCTCTGCATCTGATATCCCCAGATGTAACTGTGATGATGAGGCCAACTTGTGGACTATTGAGAGCATTCTGGAATGCCAGAGAGTCAGTGATTTCCTTATTGCAGTGGCCTATTTTTCCATCCCCATAGAACTGCTTTACTTTATCAGCTGCTCCAACGTCCCATTCAAATGGGTGCTTTTTCAATTTATCGCCTTCATAGTACTATGTGGAATGACACATTTGCTGAATGGTTGGACTTATGGTCCCCACTCATTCCAACTCATGGTGGCACTTACTGTCTTCAAGATTCTCACTGCCTTGGTATCATGTGCCACTGCTATCACCCTCATCACTCTGATTCCCTTGCTTCTCAAAGTGAAGGTCAGAGAATTCATGCTGAAGAAAAAGACTTGGGATCTTGGCCGAGAGGTTGGTCTTATAATGAAACAGAAGGAGGCTGCAATGCATGTGAGAATGCTTACTCAAGAGATTCGTAAGTCACTTGATAGGCATACAATTCTGTACTCTACCTTGGTTGAACTGTCTAAAACTCTAGGTTTGCAGAATTGTGCAGTTTGGATGCCTGATGTTGATAAAACAGTAATGAGCCTGACTCATGAATTAAATGGGAGGAATTTAAATTTCTCTGTACCTATTACGGATCCAGATGTTTTAAGAATCAAAGGAAGTGATGGTGTAAATATTCTTAGCCCTGACTCAGCACTTGCTGCTGCCAGCAATGGGGTTTCAGATGAGGTGGGACCTGTAGCTGCGATTCGAATGCCAATGCTTCGGGTTTGCAATTTTAAAGGTGGGACACCTGAGCTAACTCAGGCCTGCTATGCATTACTGGTTTTAATTCTTCCCGGTGGAGAACCTAGATCTTGGAGCGATTATGAACTAGAGATTATTAAGGTGGTAGCTGATCAGGTAGCTGTAGCTCTATCTCATGCTGCCATTCTTGAAGAGTCCCAACTTATGAGAGAGAAGTTGGAGGAGCAAAACCGAGCTTTGCAACAAGCAAAAAGGAATGCAATGATGGCGAGTCAGGCAAGAAACTCGTTTCAGAAGGTCATGGGGGATGGAATGAGAAGGCCTATGCACTCAATTTTGGGCTTGCTGTCAATGCTAGGGGATGAGAATTTAAAGAGTGAACAAAAGCTCATTGTGGATGCAATGCTCAGGACCAGTAATGTGCTTTCAAACCTGATTAATGATGCCATGGATATTTCGGCAAAGGATGATGGAAGGTTTCCGTTGGAGGTGAGATCTTTTGGCTTACATGCCTTGATAAAAGAGGCAGCTTGCCTTGCCAAGTGCATGTGTGTTTATAAGGGTTTTGGTTTTACGGTAGAGGTTGATAGGTCTTTGCCTGACAATGTCATGGGCGATGAGAGAAGGGTCTTTCAGGTGATTTTGCATATGGTTGGGAACCTACTGGATGGTAACCATGGGGGAGGGGTTCTTGTACTTCGGATTATTGCAGAAAGTGGAAGCCAGGGAAGGAATGAACAGGGGCGAGCAACTTGGAGACCAAGTTCCTCTAGTGGGGATGTATATATTAGATTTGAGACAGGGATCAAAATCAGTAATTCTGAATTGGAGAACTCAGTTTCTATAGGACAGCTTGGTGGTGGGAAGTATGCTAGTGGCAGTGATAGAGGTGAGGGCAGATTGAGCTTCGGCATTTGCAAGAGGATAGTTCAGATGATGCAAGGGAACATATGGTTGGTATCAAATACTCAAGGTTTTCCTCAAAGCATGTCCCTTGTTCTTCGGTTTCAATTGCGAACTTCTATAGCCATATCCATCTCTGAACCTGGAGAATCTACAGAGCGTACAGATTCTAATTCTTTGTTCCGAGGCATGCATGTGTTGTTGGCCGACAATGATGATGTAAATAGAGCCGTGACCCAAAAATTGCTCCAGAAGCTTGGTTGCATAGTAACTTCTGTTTCTTCAGGCTTTGAATGCCTCAGTGTCGTTGGTCCGGCTGGGTCTTCCATACAAGTCATTCTTTTGGATCTTCATATGCCTGAGTTAGACGGCTTCGAAGTCGCCACTAGGATTCGCAAATATAGAAGCCGAAATTGGCCTGTGATCATTGCTTTGACTGCAAGTGCAGATGATAATCTTTGGGAAAGATGTATTCAAACCGGCATTAATGGAGTCATGCGGAAGCCAATTTTGATGCAAGGAATTGCCAGTGAACTTAGGAGAATCCTGGTGCAGAGAAGCTAG 2274 0.4398 MLRRVASGLLISSLLICVSASDIPRCNCDDEANLWTIESILECQRVSDFLIAVAYFSIPIELLYFISCSNVPFKWVLFQFIAFIVLCGMTHLLNGWTYGPHSFQLMVALTVFKILTALVSCATAITLITLIPLLLKVKVREFMLKKKTWDLGREVGLIMKQKEAAMHVRMLTQEIRKSLDRHTILYSTLVELSKTLGLQNCAVWMPDVDKTVMSLTHELNGRNLNFSVPITDPDVLRIKGSDGVNILSPDSALAAASNGVSDEVGPVAAIRMPMLRVCNFKGGTPELTQACYALLVLILPGGEPRSWSDYELEIIKVVADQVAVALSHAAILEESQLMREKLEEQNRALQQAKRNAMMASQARNSFQKVMGDGMRRPMHSILGLLSMLGDENLKSEQKLIVDAMLRTSNVLSNLINDAMDISAKDDGRFPLEVRSFGLHALIKEAACLAKCMCVYKGFGFTVEVDRSLPDNVMGDERRVFQVILHMVGNLLDGNHGGGVLVLRIIAESGSQGRNEQGRATWRPSSSSGDVYIRFETGIKISNSELENSVSIGQLGGGKYASGSDRGEGRLSFGICKRIVQMMQGNIWLVSNTQGFPQSMSLVLRFQLRTSIAISISEPGESTERTDSNSLFRGMHVLLADNDDVNRAVTQKLLQKLGCIVTSVSSGFECLSVVGPAGSSIQVILLDLHMPELDGFEVATRIRKYRSRNWPVIIALTASADDNLWERCIQTGINGVMRKPILMQGIASELRRILVQRS 757
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi09g1878 757 Coils Coil 332 362 - -
Mibi09g1878 757 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 347 428 IPR036097 GO:0000155|GO:0007165
Mibi09g1878 757 FunFam Ethylene receptor 4 329 423 - -
Mibi09g1878 757 Pfam Response regulator receiver domain 636 745 IPR001789 GO:0000160
Mibi09g1878 757 FunFam Ethylene receptor 632 756 - -
Mibi09g1878 757 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 474 592 IPR003594 -
Mibi09g1878 757 Gene3D - 426 608 IPR036890 -
Mibi09g1878 757 Gene3D - 616 753 - -
Mibi09g1878 757 PIRSF Ethylen_sen_hybr_HK 1 757 IPR014525 GO:0004672|GO:0005789|GO:0009723|GO:0038199|GO:0051740
Mibi09g1878 757 SUPERFAMILY GAF domain-like 183 329 - -
Mibi09g1878 757 Gene3D - 159 327 IPR029016 -
Mibi09g1878 757 PANTHER TWO-COMPONENT SENSOR HISTIDINE KINASE 23 755 - -
Mibi09g1878 757 CDD REC_ETR-like 636 749 - -
Mibi09g1878 757 SMART REC_2 634 753 IPR001789 GO:0000160
Mibi09g1878 757 SMART HisKA_10 362 427 IPR003661 GO:0000155|GO:0007165
Mibi09g1878 757 Pfam His Kinase A (phospho-acceptor) domain 368 426 IPR003661 GO:0000155|GO:0007165
Mibi09g1878 757 Gene3D - 328 425 - -
Mibi09g1878 757 ProSiteProfiles Response regulatory domain profile. 635 753 IPR001789 GO:0000160
Mibi09g1878 757 CDD HATPase_ETR2_ERS2-EIN4-like 468 603 - -
Mibi09g1878 757 CDD HisKA 360 422 IPR003661 GO:0000155|GO:0007165
Mibi09g1878 757 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 416 593 IPR036890 -
Mibi09g1878 757 Pfam GAF domain 180 326 IPR003018 GO:0005515
Mibi09g1878 757 SUPERFAMILY CheY-like 631 753 IPR011006 -
Mibi09g1878 757 SMART gaf_1 180 336 IPR003018 GO:0005515
Mibi09g1878 757 ProSiteProfiles Histidine kinase domain profile. 369 605 IPR005467 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi09g1878 Mibi-ChrMibi09 37801341 37804154 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi09g1878 21 753 Miscellaneous Gene Families AT3G04580 58.143 0.0 832
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Mibi09g1878 HATPase_c 1.4e-08 CL0025