Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi09g1825 ATGGTTATATATTCCTTTTCCCTTTACATTTCGCGGCACATTTCAACATCAACAACCTACGAAATGGCCGCTGTTCGATCCCTCCCCCTCTTCTTCTTCCTCACCATCCTCACTCTTCCTTCTCTCTCTTCTTCTTCCGATGCCGATGCCGATGCCCTCCTCAAGCTCAAACAATCATTCACCAATTCCTCTTCCCTCTCTTCATGGAAGCCCGATTCCCCACCATGCCGATGGGCCGGAGTCATGTGTGACAACAAAACCATCATCGGCCTTCACCTCGCCGACATGGGTCTCTCCGGAAAAATCGACATTGACGCCATGCTACAGATCAAAGGCCTCCGTACCATTAGCTTAGTCAACAATTCCTTCTCAGGTCCCATCCCTGAGTTCAACAAGCTCGGTGCTCTCAAGGCTTTATACCTCTCAAGCAACCAATTTTCTGGCCAGATTCCCTCCGATTTCTTCTCCTATTTAAACTCTTTAAAAAAAATCTGGCTTTCTTACAACAGATTCTCCGGCCCAATCCCAGATTCCATATCCGACATTGACTTGCTCATAGAGATTCACCTCGAGAACAATGAATTCTCAGGCCAAATCCCACAGCTCACACAGGGCGTAAAGTCCCTTGACGTGTCAAACAACAAGCTTGAAGGTCCAATCCCATATAACTTAGCGAGATTTGGGGCTAATTCCTTCAAGGGGAATGATGGGTTATGTGGGAAACCTCTAGAGAAAGCGTGTGATGACCAAAAGGGTGGGAGTAAAAAATCCTCCCACGTCTTGTTGGTCATCTTCATCATCCTCTGCTTGGTCATCGGAGTCATACTGTTCATAACGGTCAGATCAAAACGACGTCGTTTGGACGGCGACTTCAGCGTGTTGCACAGAGACATGATGGATGAGACGTTACAAGTGCACGTGCCGAGCTCGCCGGAAAGCAGAGACTCAGAATCGAGCAGGAGAGGGATGGGATCGAGGAGGGTTCCGGGGAAGAATGGGAATTCAGAACTGGTGATGGTGAATAAAGAGAAGGGAGAGTTTGGTATGCAGGATTTGATGAGGGCGAATGCGGAGATGCTTGGAAATGGATTATTGGGATCCACTTTTAAGGCAATTACCGAAAATGGGTTGAGCGTGGCGGTGAAGAAGACTAGGGTCATTAATCAGATAGGCAGAGATGTTTTTGATGCAGAGATGAGAGACTGGGGGAGATTCAGACATGCCAACATCTTGCCCATCTTGGCTTACAATTTTCAGAAGGATTCCAAGCTCATTGTCACAGAGCTCATGCCCAAAGGCAGCTTGTTCTATGTTTTACATGGGGATACGGGGAGATCTCATGCTGATCTGACATGGCGTGTGCGTTTGAAGATCATCAAAGGGATTGCGCAGGGCCTCCGCTTCCTTCATTCTCACTTCTCTTCCATTGAACTCCCTCATGGGAACTTGAAATCCAGCAATGTCCTCCTGACACAAGACTACGAGCCACTCCTATCTGATTATGCCTTACATCAGCTCATCAACCCCAGTCATTTTCACGCTTTGTTCGCATACCAAACCCCGGACTTCGTGCAATACCAACTGATTTCCCAAAAGGTCGATGTGTATTGCCTCGGAATCATCATCCTCGAGATAATCACCGGGAGAGTGCCAACTCAATATCAGATCAACGTCAATGGCAGCATTGATGTTGTGGATTGGGTCCTCCATGCAATTTCTGAGAGAAGAGAAGTGGAAGTGATTGATCACGAAATAGTAGACACCCCTAACTCTCTAAATCATATGATGAAGATTCTCCAAATCGGAGCCGCTTGCACCGAAAATAACCCTGAAAAACGAATTAACATGAGTGAAGCCATTAGGAGGATAGAGGATGTACGAGCCTGA 1887 0.4711 MVIYSFSLYISRHISTSTTYEMAAVRSLPLFFFLTILTLPSLSSSSDADADALLKLKQSFTNSSSLSSWKPDSPPCRWAGVMCDNKTIIGLHLADMGLSGKIDIDAMLQIKGLRTISLVNNSFSGPIPEFNKLGALKALYLSSNQFSGQIPSDFFSYLNSLKKIWLSYNRFSGPIPDSISDIDLLIEIHLENNEFSGQIPQLTQGVKSLDVSNNKLEGPIPYNLARFGANSFKGNDGLCGKPLEKACDDQKGGSKKSSHVLLVIFIILCLVIGVILFITVRSKRRRLDGDFSVLHRDMMDETLQVHVPSSPESRDSESSRRGMGSRRVPGKNGNSELVMVNKEKGEFGMQDLMRANAEMLGNGLLGSTFKAITENGLSVAVKKTRVINQIGRDVFDAEMRDWGRFRHANILPILAYNFQKDSKLIVTELMPKGSLFYVLHGDTGRSHADLTWRVRLKIIKGIAQGLRFLHSHFSSIELPHGNLKSSNVLLTQDYEPLLSDYALHQLINPSHFHALFAYQTPDFVQYQLISQKVDVYCLGIIILEIITGRVPTQYQINVNGSIDVVDWVLHAISERREVEVIDHEIVDTPNSLNHMMKILQIGAACTENNPEKRINMSEAIRRIEDVRA 628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi09g1825 628 Gene3D Ribonuclease Inhibitor 45 203 IPR032675 -
Mibi09g1825 628 Gene3D Phosphorylase Kinase; domain 1 323 429 - -
Mibi09g1825 628 Pfam Leucine rich repeat N-terminal domain 47 84 IPR013210 -
Mibi09g1825 628 SUPERFAMILY Protein kinase-like (PK-like) 358 622 IPR011009 -
Mibi09g1825 628 Pfam Leucine rich repeat 136 194 IPR001611 GO:0005515
Mibi09g1825 628 Pfam Protein kinase domain 357 620 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi09g1825 628 MobiDBLite consensus disorder prediction 302 335 - -
Mibi09g1825 628 FunFam Nuclear pore complex protein NUP107 46 201 - -
Mibi09g1825 628 Gene3D Ribonuclease Inhibitor 206 245 IPR032675 -
Mibi09g1825 628 SUPERFAMILY L domain-like 61 227 - -
Mibi09g1825 628 ProSiteProfiles Protein kinase domain profile. 354 628 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi09g1825 628 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 33 627 - -
Mibi09g1825 628 Gene3D Transferase(Phosphotransferase) domain 1 430 628 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi09g1825 Mibi-ChrMibi09 37108195 37110823 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi09g1825 22 626 Receptor kinase-like Gene Family AT3G42880 44.025 7.30e-180 522
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Mibi09g1825 Pkinase 8.3e-28 CL0016