Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi09g1819 ATGCCACAGCCGCAAACTCCATCTCTCACTCAATACATCCCACAACAAACACATCACTCAATTCACAGGCTTTTTAAAAAAAAAAAAAAAAAACAGGACAAATTCAATTTACATTTGTTCTCACTTGTGGAGGGAAAAAAAGAAAAAAGAAAAAAGGGGAATATGGTGAAGCAGATCTTGGATAATAAGCCATCGGAACAAAGCGATTCTAAGTTCAGAGGTGTTCGAAAGAGAAAGTGGGGCAAGTTTGTTTCCGAAATTAGACTTCCCAACAGCAGGGAGAGAATCTGGTTGGGATCCTATGATTCCGCCGAGAAGGCGGCGCGTGCTTTTGACGCCGCCATGTTCTGCCTACGTGGCCGCTCCGGCAACTTTAACTTCCCCGACAACCCCCCCGACATCGCCGGCGGCAGCTCCATGTCACCCGCTCAGATCCAAGCCGCCGCCGCCCGGTTCGCCAACTCGGATCTCGGGTCGGGTCAGCAGGGCAGACCACTAACCCGGGATTCGGCCGCGGAGTCCCCGTCGCCGTCGATTTCTGAGGTGACGGTGCAAACGGACGGTGAGATGACACAAAATGAATCGGTTCCGGATCTTTTTAAGACGGTCGGGTCGGGTCATTATGAGAATGAATATGGGATATTTGCGGGGTTTGATGATCTAACAAGTGGATTCTACATACCGGAAATACCGAGTGTGAATTACGAGGAAGAGAATTTGGATGGGCTGATAATTGACGACTCATTCCTGTGGAATTTTTAA 762 0.4882 MPQPQTPSLTQYIPQQTHHSIHRLFKKKKKKQDKFNLHLFSLVEGKKEKRKKGNMVKQILDNKPSEQSDSKFRGVRKRKWGKFVSEIRLPNSRERIWLGSYDSAEKAARAFDAAMFCLRGRSGNFNFPDNPPDIAGGSSMSPAQIQAAAARFANSDLGSGQQGRPLTRDSAAESPSPSISEVTVQTDGEMTQNESVPDLFKTVGSGHYENEYGIFAGFDDLTSGFYIPEIPSVNYEEENLDGLIIDDSFLWNF 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi09g1819 253 MobiDBLite consensus disorder prediction 1 29 - -
Mibi09g1819 253 ProSiteProfiles AP2/ERF domain profile. 71 128 IPR001471 GO:0003700|GO:0006355
Mibi09g1819 253 SUPERFAMILY DNA-binding domain 70 129 IPR016177 GO:0003677
Mibi09g1819 253 Gene3D AP2/ERF domain 70 129 IPR036955 GO:0003700|GO:0006355
Mibi09g1819 253 SMART rav1_2 71 134 IPR001471 GO:0003700|GO:0006355
Mibi09g1819 253 MobiDBLite consensus disorder prediction 156 179 - -
Mibi09g1819 253 Pfam AP2 domain 70 120 IPR001471 GO:0003700|GO:0006355
Mibi09g1819 253 MobiDBLite consensus disorder prediction 46 74 - -
Mibi09g1819 253 FunFam Ethylene-responsive transcription factor 2 70 129 - -
Mibi09g1819 253 PRINTS Ethylene responsive element binding protein signature 72 83 IPR001471 GO:0003700|GO:0006355
Mibi09g1819 253 PRINTS Ethylene responsive element binding protein signature 94 110 IPR001471 GO:0003700|GO:0006355
Mibi09g1819 253 CDD AP2 70 130 IPR001471 GO:0003700|GO:0006355
Mibi09g1819 253 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 52 187 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi09g1819 Mibi-ChrMibi09 37032305 37033176 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi09g1819 70 253 AP2-EREBP Transcription Factor Family AT1G19210 51.282 4.96e-54 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mibi09g1819 AP2 1.3e-11 CL0081