Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi09g1817 ATGGCAACCGCTCAGCTCACAGCATCATCATTTTCTGCTAAGATTTTGCCCTCGTTTGAAGGTCTCCGACCTTCGATGGTTCAGTGTTCTGCTGTCCGACACGTAAGAATAGGTGGCCTTACTCAAAGGTCGTTCCGGGGTTTGGTTGTTAAAGCCACAGCTGTTGTTGCCCCCAAGTATACCTCGATTAAGCCTTTGGGTGATAGAGTGCTGATAAAAATTAAGGATACTCAAGAGATGACTGATGGTGGGATTTTACTTCCCACATCTGCTCAATCAAAGCCTCAAGGTGGTGAAGTGGTTGCTATTGGAGAGGGAAAGACAATTGGGAAGAGCAAAGTTGACATTTCTGTGAAGCCTGGGGCACAAGTTGTGTATTCAAAGTATGCTGGGACTGAGGTGGAGTTTAATGGTTCAAAGCATCTTATATTAAAGGATGATGACATTGTCGGTATCCTGGAAACAGATGATATCAAGGATCTTAAACCTTTGAATGATAGAGTGCTGATCAAGCTTTCGGAGGTTGAGGAAACGACTTCAGGGGGTTTGATACTGACAGAGGCAGCAAAGAAGGAGAAACCATCTTCTGGAACGGTGGTAGCCGTTGGACCAGGGCCTCTTGATGAGGAAGGCAACAGAAAACCGTTGTCCGTTAGTCCTGGAAACACTGTTTTGTATTCCAAGTATGCGGGGAATGACTTCAAGGGCAAGGATGGATCTGACTACATTACCATAAAGGTCTCAGATGTGATTGCTATCATTAATTAG 768 0.4492 MATAQLTASSFSAKILPSFEGLRPSMVQCSAVRHVRIGGLTQRSFRGLVVKATAVVAPKYTSIKPLGDRVLIKIKDTQEMTDGGILLPTSAQSKPQGGEVVAIGEGKTIGKSKVDISVKPGAQVVYSKYAGTEVEFNGSKHLILKDDDIVGILETDDIKDLKPLNDRVLIKLSEVEETTSGGLILTEAAKKEKPSSGTVVAVGPGPLDEEGNRKPLSVSPGNTVLYSKYAGNDFKGKDGSDYITIKVSDVIAIIN 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi09g1817 255 SUPERFAMILY GroES-like 61 154 IPR011032 -
Mibi09g1817 255 Hamap Co-chaperonin GroES [groES]. 160 255 IPR020818 GO:0005524|GO:0006457|GO:0140662
Mibi09g1817 255 Pfam Chaperonin 10 Kd subunit 161 254 IPR020818 GO:0005524|GO:0006457|GO:0140662
Mibi09g1817 255 Pfam Chaperonin 10 Kd subunit 63 152 IPR020818 GO:0005524|GO:0006457|GO:0140662
Mibi09g1817 255 PRINTS 10kDa chaperonin signature 63 78 IPR020818 GO:0005524|GO:0006457|GO:0140662
Mibi09g1817 255 PRINTS 10kDa chaperonin signature 119 131 IPR020818 GO:0005524|GO:0006457|GO:0140662
Mibi09g1817 255 PRINTS 10kDa chaperonin signature 140 153 IPR020818 GO:0005524|GO:0006457|GO:0140662
Mibi09g1817 255 PRINTS 10kDa chaperonin signature 85 106 IPR020818 GO:0005524|GO:0006457|GO:0140662
Mibi09g1817 255 FunFam 20 kDa chaperonin, chloroplastic 56 155 - -
Mibi09g1817 255 PANTHER 10 KDA HEAT SHOCK PROTEIN 60 152 IPR020818 GO:0005524|GO:0006457|GO:0140662
Mibi09g1817 255 Gene3D GroES chaperonin 56 155 IPR037124 GO:0006457
Mibi09g1817 255 Gene3D GroES chaperonin 156 255 IPR037124 GO:0006457
Mibi09g1817 255 CDD cpn10 62 153 IPR020818 GO:0005524|GO:0006457|GO:0140662
Mibi09g1817 255 Hamap Co-chaperonin GroES [groES]. 62 154 IPR020818 GO:0005524|GO:0006457|GO:0140662
Mibi09g1817 255 ProSitePatterns Chaperonins cpn10 signature. 63 87 IPR018369 GO:0005524|GO:0006457
Mibi09g1817 255 FunFam 10 kDa chaperonin 159 255 - -
Mibi09g1817 255 SUPERFAMILY GroES-like 160 255 IPR011032 -
Mibi09g1817 255 CDD cpn10 161 254 IPR020818 GO:0005524|GO:0006457|GO:0140662
Mibi09g1817 255 PIRSF Cpn21 1 255 IPR017416 GO:0006457|GO:0046914|GO:1901671
Mibi09g1817 255 SMART Cpn10_2 160 254 IPR020818 GO:0005524|GO:0006457|GO:0140662
Mibi09g1817 255 SMART Cpn10_2 62 153 IPR020818 GO:0005524|GO:0006457|GO:0140662
Mibi09g1817 255 ProSitePatterns Chaperonins cpn10 signature. 161 185 IPR018369 GO:0005524|GO:0006457
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi09g1817 Mibi-ChrMibi09 37006923 37009124 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi09g1817 1 255 Calmodulin-binding Proteins AT5G20720 70.039 1.97e-123 350
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi09g1817 09 37006923 37009124 Mibi09g1817 09 37006923 37009124 ECH