Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi09g1815 ATGGGGGCGAAAAGAGGAGCGAATTCAAGTGAAGCAGTATTAGAAAAGAAGAGTAAGATTAAGGATACTGCGAACGATGATAAAAAAGACAGCACTATTTTTGCCTCTTGCTCTTTCTCAAGCCTCGGACTCCATCCTACCTTATGCGACGAGCTCCGCGGAAGAATGGGTTTCGAAGCTCCAACCTCTGTACAAGCCCAAGCAATTCCTGTTATTCTCTTAGGGCAATCCAGACTTGTTAATGCTTCCACGGGCACTGGGAAGACTGTTGCATACTTGGCTCCAATTATTCACCATTTGCAGAACTTTGATGCCAGAATCCAACGGTCCGATGGAACATATGCGTTGGTTCTTGTGCCAACGCGGGAGCTATGTTTGCAGGTTTATGAAATTCTTCAAAAGTTATTGCATCGATTTCACTGGATTGTTCCTGGATATGTAATGGGTGGTGAAAGTAGGTCAAAAGAAAAGGCCAGGTTGCGCAAAGGCATATCAATTCTGGTAGCAACTCCTGGGCGCCTTTTAGATCACTTGAAGAATACATCATCATTTTTGTACACCAATTTGCGTTGGATAATCTTTGATGAAGCTGATAGGATTTTGGAATTAGGATTCGGAAAAGAAATAAAGGAAATACTAGATCATTTAGATACGAAAACGGGTTGTGCTATCCAAGAGAACTCAGTTTCAAGACACTCTGGAGTTCTGAGACAGAATTTGCTCTTATCCGCTACTCTAAATGAAAAAGTGAATCACCTTGCTAAAATTAGTCTAGAAAATCCTGTGATGATTGGTCTTGACGGCAAAGGGACTGAACCAATTTCAACGAATGAGAGCCTTGGTTCTTTAGAATCTGATGAGGAGAGTGAAGACAATGAAGAGAAGTATCCCAGCAGCATGCTGCACCCACCTGCTGGAGATTATAAAGTTCCCACACAATTGATTCAGAGATTTGTTAAAGTACCTTGTGGCGCACGTCTTGCAGTTCTTCTTTCAATTTTGAAGTATCTTTCTGAAAGGGAAGCTTCACAAAAGATTGTGGTATTCTTTTCAACATGCGATGCAGTAGACTTTCACTTTTCACTGTTAAGTGAATTCCTATTTTCTTATCCACAATCAGAAGCTGATTCTAGGCAGATGTTTCTGGGGAGCAAAGTGTTTCGTTTGCATGGGAACATGGATCAGGAGGACAGGAGGAAAACTTTTCAGATGTTCAAAACTGAGAAATCCGCTCTGCTGTTTTCCACTGATATAGCTGCTAGAGGACTGGATTTTCCTAAAGTTAGATGCATTATACAGTATGATTCTCCAGGGGAAGCCACTGAATATGTGCACAGAGTTGGGAGAACTGCTCGGCTGGGTGAAAGAGGAGAGTCATTGTTATTTCTGCAGCCAGTTGAAATAGATTATTTACAGGTCTTGGAAAAACATGGTGCATCACTAACAGAGTATCCTCTCCTCAAAGTGTTGGATAGTTTCCCACTATATGGTCAAAAGAAGCACACCAAGAATTTTGTTGCCATAGAGTCACATCCCTGGGTCCTTTGTCTCCAGAAGGCACTTGAATCCTTCATTACGTCTAAGCCCAAAATTGATAAACTTGCCAAGAGGGGATTTTGCTCTTGGGTCCGCGCCTACACAACTCATCGTGGTGAGTTGAAAAAGATATTTATGATCAAGAAACTCCACTTGGGGCATGTAGCGAAAAGCTTTGCACTTAAACAACAACCTTCCTTAGTTGCAAAGTCATACCAGAAGCAAAGCAAGAGGAAGAGATTTCAGAAGCAAAGCGGTCTGGCTAAAAAGAGAAAGATCACCGGGGTGACATAA 1830 0.4197 MGAKRGANSSEAVLEKKSKIKDTANDDKKDSTIFASCSFSSLGLHPTLCDELRGRMGFEAPTSVQAQAIPVILLGQSRLVNASTGTGKTVAYLAPIIHHLQNFDARIQRSDGTYALVLVPTRELCLQVYEILQKLLHRFHWIVPGYVMGGESRSKEKARLRKGISILVATPGRLLDHLKNTSSFLYTNLRWIIFDEADRILELGFGKEIKEILDHLDTKTGCAIQENSVSRHSGVLRQNLLLSATLNEKVNHLAKISLENPVMIGLDGKGTEPISTNESLGSLESDEESEDNEEKYPSSMLHPPAGDYKVPTQLIQRFVKVPCGARLAVLLSILKYLSEREASQKIVVFFSTCDAVDFHFSLLSEFLFSYPQSEADSRQMFLGSKVFRLHGNMDQEDRRKTFQMFKTEKSALLFSTDIAARGLDFPKVRCIIQYDSPGEATEYVHRVGRTARLGERGESLLFLQPVEIDYLQVLEKHGASLTEYPLLKVLDSFPLYGQKKHTKNFVAIESHPWVLCLQKALESFITSKPKIDKLAKRGFCSWVRAYTTHRGELKKIFMIKKLHLGHVAKSFALKQQPSLVAKSYQKQSKRKRFQKQSGLAKKRKITGVT 609
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi09g1815 609 CDD SF2_C_DEAD 314 463 - -
Mibi09g1815 609 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 31 264 IPR027417 -
Mibi09g1815 609 SMART DUF4217_3 516 581 IPR025313 -
Mibi09g1815 609 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 329 501 IPR001650 -
Mibi09g1815 609 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 75 485 IPR027417 -
Mibi09g1815 609 ProSitePatterns DEAD-box subfamily ATP-dependent helicases signature. 193 201 IPR000629 -
Mibi09g1815 609 MobiDBLite consensus disorder prediction 1 24 - -
Mibi09g1815 609 Pfam Domain of unknown function (DUF4217) 518 578 IPR025313 -
Mibi09g1815 609 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 69 264 IPR014001 -
Mibi09g1815 609 SMART helicmild6 376 454 IPR001650 -
Mibi09g1815 609 MobiDBLite consensus disorder prediction 10 24 - -
Mibi09g1815 609 Pfam Helicase conserved C-terminal domain 332 454 IPR001650 -
Mibi09g1815 609 SMART ultradead3 57 277 IPR014001 -
Mibi09g1815 609 CDD DEADc_DDX31 48 265 - -
Mibi09g1815 609 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 37 66 IPR014014 GO:0003724
Mibi09g1815 609 PANTHER RNA HELICASE 24 582 - -
Mibi09g1815 609 Pfam DEAD/DEAH box helicase 62 252 IPR011545 GO:0003676|GO:0005524
Mibi09g1815 609 Gene3D - 3 267 IPR027417 -
Mibi09g1815 609 Gene3D - 325 605 IPR027417 -
Mibi09g1815 609 MobiDBLite consensus disorder prediction 274 303 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi09g1815 Mibi-ChrMibi09 36970314 36975278 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi09g1815 57 485 Eukaryotic Initiation Factors Gene Family AT5G11200 26.471 2.98e-27 113