Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi09g1813 ATGAAGCTCAAGCTCATAGATTTGCATTTTTTTCTACTTTTGGTGGGTCTTCTTGGTTTCAATGCACAGGCCTCCAATGTGACAGTGAATGAGACGACTTGTGGTTCCTTAGACGGTCCTCAGAATAGAGAAAATGGAGATCCTTGCCCCAGTGGTTGGGTTGTTGGCCCGAATAAAGCCAGGTGCTTTTACCATGTTGGAAAGCGCCAATCTTGGAATGACTCTGAGACCCACTGTAATAAATGTGGCGGACATTTAGCTTCTTTGTTATCTCTTCCAGAATTACACTTTGCTCAGAGTCTATGTGGTGATAGCTGCTGGGTTGGGGGAAGAAGAATTAACTCTACGGCTGGTTATGAGTGGGGATGGTCTGACAAATCTATATGGAATGAGTCCATGTTTTCTTCGTCGCTTGATCCAACTAATTGTACTGGATTAATCTGCAACACAAAAGGTGCAGTTGATAAATGTACAATAATGACTAATCATTCAGATTCTCTTATGAGTGATTCATGCGACAAACTGAATGCTTCAGTGTGTGTACTTGATATAGATAAAAAATGTTCCCACATGCGCTGCCACAGGGAATATCTTATCATCCTTGCAGGGGTCAGTGCATTGATCCTCTGCACAATGTCAGCTGTTGTGGTATGGCTTCTTGCACATAAACGGAGCAAGAAGAGTAAAAGATCTAGAAAAGTTTCGAATCCAGCTGCTTCTCAGTTAGTTCCCCCCTCTTGGAAAGTTTTTACCAAAGAGGAATTAAGGTCGATAACAAAGAACTTTAGTGAAGGCAATCGCCTTGTTGGGGATGCCAAGACTGGCGGTACATATAGTGCAGTCCTGCCTGATGGATCAAAGGTTGCAGTCAAGAGATTGAAGAAGTCAACTTTTCAGAGGAAAAAGGAGTTCTATTCTGAAATTGGTAGGGTTGCAAGACTTCGTCATCCTAATTTAGTGGCTGTGAAGGGATGCTGCTATGATCATGGTGACCGCTACATTGTTTATGAGTTTGTAGTTAATGGCCCCTTAGACAAATGGCTACATCATATACCAAGGGGAGGTCGCAGCTTAGATTGGACTATGAGAATGAAAATCGCCACAACTCTTGCCCAAGGAATTGCTTTTCTGCATGACAAGGTAAAGCCATATGTAGTTCATCGGGATATACGGGCCAGTAATGTGCTGCTGGATGAGGAGTTTGGAGCTCACCTTATGGGAGTTGGTCTATCCAAGTTCGTGCCATACGAAGCGATGCATGAGAGGACTGTGATGGCAGGTGGAACTTACGGGTATCTTGCTCCAGAGTATGTGTATAGAAATGAGCTCACAACAAAGAGTGATGTTTACAGCTTTGGTGTGCTATTACTTGAGATAGTGAGTGGACGTAGACCTGCACAGGCAGTAGATTCAGTGGGTTGGCAGAGCATTTTCGAATGGGCGACGCCACTGGTGCAAGCACATCGCTATCCAGAACTCTTGGATCCTCATATATCTTCGTCGTCGTCATCGTCTACAACCCCCGAGGCCAGTACGATCCAGAAGGTGGTTGACCTTGTCTATTCATGTACTCAGCATGTCCCATCTATGCGTCCTAGAATGTCTCACGTTGTCCATCAGCTCCAACAATTGGCTAACCCACCGACCAAGTGA 1653 0.4459 MKLKLIDLHFFLLLVGLLGFNAQASNVTVNETTCGSLDGPQNRENGDPCPSGWVVGPNKARCFYHVGKRQSWNDSETHCNKCGGHLASLLSLPELHFAQSLCGDSCWVGGRRINSTAGYEWGWSDKSIWNESMFSSSLDPTNCTGLICNTKGAVDKCTIMTNHSDSLMSDSCDKLNASVCVLDIDKKCSHMRCHREYLIILAGVSALILCTMSAVVVWLLAHKRSKKSKRSRKVSNPAASQLVPPSWKVFTKEELRSITKNFSEGNRLVGDAKTGGTYSAVLPDGSKVAVKRLKKSTFQRKKEFYSEIGRVARLRHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDKWLHHIPRGGRSLDWTMRMKIATTLAQGIAFLHDKVKPYVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPYEAMHERTVMAGGTYGYLAPEYVYRNELTTKSDVYSFGVLLLEIVSGRRPAQAVDSVGWQSIFEWATPLVQAHRYPELLDPHISSSSSSSTTPEASTIQKVVDLVYSCTQHVPSMRPRMSHVVHQLQQLANPPTK 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi09g1813 550 SUPERFAMILY Protein kinase-like (PK-like) 236 542 IPR011009 -
Mibi09g1813 550 Gene3D Transferase(Phosphotransferase) domain 1 339 546 - -
Mibi09g1813 550 FunFam C-type lectin receptor-like tyrosine-protein kinase At1g52310 339 550 - -
Mibi09g1813 550 ProSitePatterns Tyrosine protein kinases specific active-site signature. 385 397 IPR008266 GO:0004672|GO:0006468
Mibi09g1813 550 ProSiteProfiles Protein kinase domain profile. 263 542 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi09g1813 550 CDD CLECT 61 180 - -
Mibi09g1813 550 Gene3D Phosphorylase Kinase; domain 1 221 338 - -
Mibi09g1813 550 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 170 544 - -
Mibi09g1813 550 Pfam Lectin C-type domain 69 181 IPR001304 -
Mibi09g1813 550 Pfam Protein tyrosine and serine/threonine kinase 284 541 IPR001245 GO:0004672|GO:0006468
Mibi09g1813 550 FunFam C-type lectin receptor-like tyrosine-protein kinase 240 338 - -
Mibi09g1813 550 ProSiteProfiles C-type lectin domain profile. 58 181 IPR001304 -
Mibi09g1813 550 SMART tyrkin_6 262 541 IPR020635 GO:0004713|GO:0006468
Mibi09g1813 550 SUPERFAMILY C-type lectin-like 39 183 IPR016187 -
Mibi09g1813 550 Gene3D - 34 183 IPR016186 -
Mibi09g1813 550 SMART CLECT_2 49 181 IPR001304 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi09g1813 Mibi-ChrMibi09 36959621 36963156 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi09g1813 79 547 Receptor kinase-like Gene Family AT1G52310 69.182 0.0 632
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_C-LEC Mibi09g1813 PK_Tyr_Ser-Thr 2.5e-40 CL0016