Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi09g1795 ATGTTCAATGCTCAAGGTCCTTCCAAAAAATCTAGTCTCCTTGCCATCCTCAGTGGAAATTCATGTGACAGTAAACAAAAATGGAAACTGGATGATTTTCAGGATCAATCTCCATACCCCATTCCAGAGCTTACTTCATCCGGACGTCTTGAGGTTAATGTTTTGATCAAACCAACTGTTGATGAACTTCATCGAGTTTTTGAGGCCTTGGAGCCAAATTTTGTTTACCTGCAAGGGGAGCAGCTAGAAGATAATGAACAAATTGGGTCCCTAGTATGGGAAGATGTTGATCTGTCTAGCCCAGAAGCCTTGTGTGGATTATTTTCTTCCAAATTACCTAATACGGTATATTTAGAAACTCCTGAAGGAGAAAGTTTGGCGGAGGCTCTCCATTCTAAGGGAATACCTTACACAATATATTGGAAAAGTGAATTTTCAAAGTATGCTGCCTCACATTTTCGTCAAGCTTTTTTCTCAGTGGCACAAAGTACCTCCAGCCATACATGGGATGCTTTCCAGCTTGCTCTTGCTTCTTTCAGAATATACTGTGTACAAAACAATGTCTCACCTTCAAACAGCATGGAGAGCAGAAGCAAGCTCGGGCCACAAATGTTTGGTGACCCTCCAAACATTGATATTGCTCTATTTGAATCAGGCATGAATGAGGAGGAGGACTCACCTGAGACTATTTCTGCTCTGAAGATATATGATGATGATGTGAACATGAGATTTCTTGTGTGTGGAGTTCCCTGCATGCTTGATTCTTGTTTATTGGAATCATTGGAGGACGGACTCAATGCTCTCCTGTGTACAGAAATACGGGGATTTAAACTTCACAACCGGACAAGTGCTCCACCACCTCCTCTTCAGGCAGGGACATTCTCACGTGGTGTGGTGACCATGCGTTGTGATATATCCACATGTAGTTCCGCTCATATATCACTCTTGGTGTCTGGTAGTGCAGATACTTGCTTTAACGATCAGCTTTTGGAGAATTATATAAAAAAGGAGCTTATTGAGAATAGTCATCTAGTTCAGGCATTTACTAATTGTGAACCAAGCAACTTGCCTTCCTCTGAGCCTCGAAGGTCAACCTCAATAGCTTGTGGGGCTAGTGTATTTGAAGTTTGCATGCAGGTCCCTACATGGGCTTCACTGGTTTTGAGGCAGCTTGCACAAGAAGTGTCATACCGCAGCCTGGTTATGCTGGGAGTAGCCAGCATCCAAGGATTGCCTGTTGCGTCATTTAAAAAAGCTGATGCTGAACGCCTCCTTTACTTTTGTTCGAGTCATCTGGAAAAAAATTGCCTTAATGACCCCGTTTCATTTGGGCATCCTAGTTGGCTGATACCTCCAGCGCATACTCGAAAAAGATCAGAGCCTTTCTCTGGAATAAAGTCTGTCAATTCTAGTAGCCTTCAAGTCAGTGGTAGTGGTAACAATAGACGTAAATTGAGCATTGCTGCAATGAGGCCAATCCCTCATTCACATTGTCAGAAGATTCAACCTTTTTCTGGATTGTCTGAGGGGGAAAGGCTTGATGGAGAACGTGGAAAATCAAATTTTCCAATGGCTCCAAGAAAGCATAATGGTATAGGCTCTGTTTCAGTCACAAATAGGAAATCTTCGTCAACTTCCTTTCAGGCTCAACAGATTGTTACATTAAATCCACTACCTATGAAGAAGCATGATTGTGACAGAGCTCCCATACGGACCTGTTCAGAGGAGGAATTCTTGAGGGATGTAATGCAGTTTCTTATCCTTCGTGGGCATTCCCGGCTAATTCCACAAGGTGGTCTTTCTGAATTTCCTGAAGCCGTTCTGAATGCTAAACGCCTTGATCTTTTTAACTTGTACAGAGAGGTGGTATCAAGAGGAGGGTTTCATGTTGGTAATGGAATTAATTGGAAAGGACAGGTTTTCTCAAAGATGCGAAATCACACTTTGACAAATAGAATGACAGGTGTTGGCAATACACTTAAAAGGCATTATGAAACTTATCTTCTAGAATATGAACTGGCTCATGATGACATAGATGGAGAGTGCTGCTTGTTGTGCCGCAGTAGCGCCGCTGGTGATTGGGTGAATTGCGGGATATGCGGTGAGTGGGCTCACTTTGGCTGTGATAGGCGCCAAGGACTTGGTGCGTTTAAGGACTATGCTAAAACTGATGGGCTAGAGTACGTTTGCCCACATTGCAGCATATCAAACTTCAGAAAGAAATCTCAGAAAACTTCAAACGGACATTAA 2250 0.4284 MFNAQGPSKKSSLLAILSGNSCDSKQKWKLDDFQDQSPYPIPELTSSGRLEVNVLIKPTVDELHRVFEALEPNFVYLQGEQLEDNEQIGSLVWEDVDLSSPEALCGLFSSKLPNTVYLETPEGESLAEALHSKGIPYTIYWKSEFSKYAASHFRQAFFSVAQSTSSHTWDAFQLALASFRIYCVQNNVSPSNSMESRSKLGPQMFGDPPNIDIALFESGMNEEEDSPETISALKIYDDDVNMRFLVCGVPCMLDSCLLESLEDGLNALLCTEIRGFKLHNRTSAPPPPLQAGTFSRGVVTMRCDISTCSSAHISLLVSGSADTCFNDQLLENYIKKELIENSHLVQAFTNCEPSNLPSSEPRRSTSIACGASVFEVCMQVPTWASLVLRQLAQEVSYRSLVMLGVASIQGLPVASFKKADAERLLYFCSSHLEKNCLNDPVSFGHPSWLIPPAHTRKRSEPFSGIKSVNSSSLQVSGSGNNRRKLSIAAMRPIPHSHCQKIQPFSGLSEGERLDGERGKSNFPMAPRKHNGIGSVSVTNRKSSSTSFQAQQIVTLNPLPMKKHDCDRAPIRTCSEEEFLRDVMQFLILRGHSRLIPQGGLSEFPEAVLNAKRLDLFNLYREVVSRGGFHVGNGINWKGQVFSKMRNHTLTNRMTGVGNTLKRHYETYLLEYELAHDDIDGECCLLCRSSAAGDWVNCGICGEWAHFGCDRRQGLGAFKDYAKTDGLEYVCPHCSISNFRKKSQKTSNGH 749
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi09g1795 749 PANTHER AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN 4 6 748 IPR042293 -
Mibi09g1795 749 MobiDBLite consensus disorder prediction 508 540 - -
Mibi09g1795 749 CDD PHD_ARID4_like 682 733 - -
Mibi09g1795 749 SUPERFAMILY FYVE/PHD zinc finger 668 736 IPR011011 -
Mibi09g1795 749 SUPERFAMILY ARID-like 572 686 IPR036431 GO:0003677
Mibi09g1795 749 SMART ARID_2 569 672 - -
Mibi09g1795 749 Gene3D - 561 677 IPR036431 GO:0003677
Mibi09g1795 749 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 678 734 IPR013083 -
Mibi09g1795 749 Pfam ARID/BRIGHT DNA binding domain 575 672 IPR001606 GO:0003677
Mibi09g1795 749 ProSiteProfiles ARID domain profile. 572 676 IPR001606 GO:0003677
Mibi09g1795 749 CDD ARID 574 672 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi09g1795 Mibi-ChrMibi09 36677741 36685409 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi09g1795 1 748 ARID Transcription Factor Family AT3G43240 63.298 0.0 952
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR ARID Mibi09g1795 ARID 6.4e-14 CL0123